EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011362 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 876 bases
Position: chr2:6628454-6629329
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014783	RRM_1	PF00076.22	3e-30	1	2
ENSCINP00000014783	RRM_1	PF00076.22	3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014783	-	852	-	ENSCINP00000014783	283 (aa)	-	F6Y7T8

Gene Model

Click here to download ENSCING00000011362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011362's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011362	-	65	56.216	ENSAPOG00000023399	-	59	53.514	Acanthochromis_polyacanthus
ENSCING00000011362	-	65	56.216	ENSACIG00000018649	srsf4	89	54.962	Amphilophus_citrinellus
ENSCING00000011362	-	65	55.135	ENSAOCG00000005997	srsf4	96	53.125	Amphiprion_ocellaris
ENSCING00000011362	-	65	57.065	ENSATEG00000005680	srsf4	59	57.609	Anabas_testudineus
ENSCING00000011362	-	65	57.838	ENSACLG00000003395	srsf4	61	71.622	Astatotilapia_calliptera
ENSCING00000011362	-	65	52.717	ENSACLG00000021269	-	50	49.744	Astatotilapia_calliptera
ENSCING00000011362	-	65	56.989	ENSAMXG00000034811	srsf4	75	66.234	Astyanax_mexicanus
ENSCING00000011362	-	65	46.701	WBGene00004698	rsp-1	97	48.630	Caenorhabditis_elegans
ENSCING00000011362	-	65	50.785	ENSCING00000024718	-	56	50.785	Ciona_intestinalis
ENSCING00000011362	-	65	48.223	ENSCING00000020631	-	77	48.936	Ciona_intestinalis
ENSCING00000011362	-	65	53.807	ENSCING00000012370	-	67	52.451	Ciona_intestinalis
ENSCING00000011362	-	65	53.927	ENSCSAVG00000002581	-	69	52.041	Ciona_savignyi
ENSCING00000011362	-	65	57.527	ENSCSEG00000010058	srsf4	75	59.542	Cynoglossus_semilaevis
ENSCING00000011362	-	65	56.757	ENSDARG00000105293	srsf4	73	66.234	Danio_rerio
ENSCING00000011362	-	65	56.452	FBgn0004587	B52	95	51.145	Drosophila_melanogaster
ENSCING00000011362	-	64	47.514	ENSEBUG00000001681	srsf4	65	47.514	Eptatretus_burgeri
ENSCING00000011362	-	58	47.561	ENSEBUG00000003129	srsf4	67	45.399	Eptatretus_burgeri
ENSCING00000011362	-	65	53.226	ENSELUG00000017551	srsf4	96	50.365	Esox_lucius
ENSCING00000011362	-	65	56.757	ENSFHEG00000007472	srsf4	83	71.429	Fundulus_heteroclitus
ENSCING00000011362	-	65	58.919	ENSGMOG00000012906	srsf4	85	51.943	Gadus_morhua
ENSCING00000011362	-	65	60.541	ENSGAFG00000018496	srsf4	80	44.178	Gambusia_affinis
ENSCING00000011362	-	65	59.459	ENSGACG00000002389	srsf4	54	59.140	Gasterosteus_aculeatus
ENSCING00000011362	-	65	52.717	ENSHBUG00000011326	-	50	49.744	Haplochromis_burtoni
ENSCING00000011362	-	65	57.838	ENSHCOG00000012540	srsf4	66	56.452	Hippocampus_comes
ENSCING00000011362	-	65	58.919	ENSKMAG00000013631	srsf4	96	47.297	Kryptolebias_marmoratus
ENSCING00000011362	-	65	58.602	ENSMAMG00000004888	srsf4	67	58.602	Mastacembelus_armatus
ENSCING00000011362	-	65	57.838	ENSMZEG00005026275	srsf4	61	71.622	Maylandia_zebra
ENSCING00000011362	-	65	59.140	ENSMMOG00000013653	srsf4	60	57.923	Mola_mola
ENSCING00000011362	-	65	59.783	ENSMODG00000011052	SRSF4	54	59.459	Monodelphis_domestica
ENSCING00000011362	-	65	58.378	ENSMALG00000013392	srsf4	65	56.989	Monopterus_albus
ENSCING00000011362	-	65	47.568	ENSNLEG00000030787	-	61	47.340	Nomascus_leucogenys
ENSCING00000011362	-	65	56.216	ENSORLG00020016052	srsf4	64	59.140	Oryzias_latipes_hni
ENSCING00000011362	-	65	56.522	ENSORLG00015007566	srsf4	69	59.140	Oryzias_latipes_hsok
ENSCING00000011362	-	69	44.309	ENSOMEG00000005541	srsf4	80	48.797	Oryzias_melastigma
ENSCING00000011362	-	65	57.447	ENSPMGG00000013436	srsf4	94	55.303	Periophthalmus_magnuspinnatus
ENSCING00000011362	-	65	48.370	ENSPMAG00000009397	srsf4	66	50.000	Petromyzon_marinus
ENSCING00000011362	-	65	60.109	ENSPLAG00000008812	srsf4	78	46.831	Poecilia_latipinna
ENSCING00000011362	-	65	60.109	ENSPMEG00000023638	srsf4	51	55.670	Poecilia_mexicana
ENSCING00000011362	-	65	55.376	ENSPNYG00000003796	srsf4	54	57.838	Pundamilia_nyererei
ENSCING00000011362	-	65	57.368	ENSPNAG00000023844	srsf4	52	59.563	Pygocentrus_nattereri
ENSCING00000011362	-	53	56.291	ENSSHAG00000012407	SRSF4	50	55.063	Sarcophilus_harrisii
ENSCING00000011362	-	65	60.109	ENSSFOG00015020292	srsf4	72	71.795	Scleropages_formosus
ENSCING00000011362	-	65	58.065	ENSSMAG00000001707	srsf4	53	56.436	Scophthalmus_maximus
ENSCING00000011362	-	65	58.378	ENSSDUG00000007387	srsf4	52	60.109	Seriola_dumerili
ENSCING00000011362	-	65	49.733	ENSSLDG00000009745	srsf4	58	50.273	Seriola_lalandi_dorsalis
ENSCING00000011362	-	65	58.602	ENSSPAG00000014538	srsf4	70	71.429	Stegastes_partitus
ENSCING00000011362	-	84	47.909	ENSTRUG00000011891	srsf4	60	58.378	Takifugu_rubripes
ENSCING00000011362	-	65	60.109	ENSXCOG00000018826	srsf4	89	58.400	Xiphophorus_couchianus
ENSCING00000011362	-	65	53.514	ENSXCOG00000003212	-	54	51.579	Xiphophorus_couchianus