EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4039 bases
Position: chr2:5557754-5561792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000021784	DBR1	PF05011.13	1.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022030	-	1374	-	ENSCINP00000021784	435 (aa)	-	F6TJB5

Gene Model

Click here to download ENSCING00000011388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011388	-	100	53.182	ENSG00000138231	DBR1	94	67.568	Homo_sapiens
ENSCING00000011388	-	87	59.375	ENSAPOG00000004318	dbr1	80	54.157	Acanthochromis_polyacanthus
ENSCING00000011388	-	98	53.721	ENSAMEG00000006272	DBR1	80	53.318	Ailuropoda_melanoleuca
ENSCING00000011388	-	91	57.357	ENSACIG00000020512	dbr1	80	53.452	Amphilophus_citrinellus
ENSCING00000011388	-	87	58.854	ENSAOCG00000008060	dbr1	80	53.483	Amphiprion_ocellaris
ENSCING00000011388	-	87	58.854	ENSAPEG00000021944	dbr1	80	54.139	Amphiprion_percula
ENSCING00000011388	-	87	58.854	ENSATEG00000019673	dbr1	82	52.980	Anabas_testudineus
ENSCING00000011388	-	100	52.477	ENSACAG00000016760	DBR1	82	52.455	Anolis_carolinensis
ENSCING00000011388	-	100	53.409	ENSANAG00000028952	DBR1	81	53.409	Aotus_nancymaae
ENSCING00000011388	-	87	59.843	ENSACLG00000024027	dbr1	85	54.607	Astatotilapia_calliptera
ENSCING00000011388	-	87	58.947	ENSAMXG00000030736	dbr1	78	52.889	Astyanax_mexicanus
ENSCING00000011388	-	99	54.338	ENSBTAG00000019949	DBR1	80	54.338	Bos_taurus
ENSCING00000011388	-	99	40.220	WBGene00000937	dbr-1	86	40.220	Caenorhabditis_elegans
ENSCING00000011388	-	99	53.547	ENSCJAG00000002433	DBR1	80	53.547	Callithrix_jacchus
ENSCING00000011388	-	98	55.046	ENSCAFG00000007501	DBR1	81	54.402	Canis_familiaris
ENSCING00000011388	-	98	55.046	ENSCAFG00020008060	DBR1	81	54.402	Canis_lupus_dingo
ENSCING00000011388	-	99	53.968	ENSCHIG00000026937	DBR1	80	53.968	Capra_hircus
ENSCING00000011388	-	90	56.489	ENSTSYG00000005317	DBR1	79	54.483	Carlito_syrichta
ENSCING00000011388	-	100	49.545	ENSCPOG00000006179	DBR1	81	49.545	Cavia_porcellus
ENSCING00000011388	-	100	53.409	ENSCCAG00000025708	DBR1	81	53.409	Cebus_capucinus
ENSCING00000011388	-	98	54.042	ENSCATG00000032054	DBR1	81	53.409	Cercocebus_atys
ENSCING00000011388	-	100	53.182	ENSCLAG00000001800	DBR1	81	53.182	Chinchilla_lanigera
ENSCING00000011388	-	98	53.580	ENSCSAG00000010977	DBR1	81	52.955	Chlorocebus_sabaeus
ENSCING00000011388	-	85	62.745	ENSCHOG00000000730	DBR1	70	62.745	Choloepus_hoffmanni
ENSCING00000011388	-	100	54.977	ENSCPBG00000007633	DBR1	74	55.257	Chrysemys_picta_bellii
ENSCING00000011388	-	87	81.530	ENSCSAVG00000007545	-	100	81.530	Ciona_savignyi
ENSCING00000011388	-	100	53.061	ENSCANG00000024237	DBR1	81	53.061	Colobus_angolensis_palliatus
ENSCING00000011388	-	98	53.811	ENSCGRG00001018497	Dbr1	80	53.182	Cricetulus_griseus_chok1gshd
ENSCING00000011388	-	98	48.730	ENSCGRG00000005958	Dbr1	79	48.182	Cricetulus_griseus_crigri
ENSCING00000011388	-	98	52.477	ENSCSEG00000002813	dbr1	79	52.328	Cynoglossus_semilaevis
ENSCING00000011388	-	87	58.333	ENSCVAG00000019969	dbr1	79	53.215	Cyprinodon_variegatus
ENSCING00000011388	-	89	56.667	ENSDARG00000056923	dbr1	78	52.116	Danio_rerio
ENSCING00000011388	-	97	54.079	ENSDNOG00000043630	DBR1	80	53.968	Dasypus_novemcinctus
ENSCING00000011388	-	89	48.941	FBgn0035838	ldbr	79	49.412	Drosophila_melanogaster
ENSCING00000011388	-	72	70.149	ENSETEG00000011830	DBR1	60	70.149	Echinops_telfairi
ENSCING00000011388	-	98	49.537	ENSEBUG00000007494	dbr1	76	49.543	Eptatretus_burgeri
ENSCING00000011388	-	98	54.503	ENSEASG00005003788	DBR1	81	53.864	Equus_asinus_asinus
ENSCING00000011388	-	98	54.734	ENSECAG00000013920	DBR1	81	54.091	Equus_caballus
ENSCING00000011388	-	98	46.437	ENSEEUG00000007059	DBR1	80	46.014	Erinaceus_europaeus
ENSCING00000011388	-	87	57.632	ENSELUG00000005587	dbr1	78	53.580	Esox_lucius
ENSCING00000011388	-	98	54.338	ENSFCAG00000002229	DBR1	81	53.708	Felis_catus
ENSCING00000011388	-	87	60.000	ENSFALG00000013467	DBR1	70	54.730	Ficedula_albicollis
ENSCING00000011388	-	98	54.023	ENSFDAG00000009524	DBR1	81	53.394	Fukomys_damarensis
ENSCING00000011388	-	87	58.684	ENSFHEG00000001743	dbr1	79	53.244	Fundulus_heteroclitus
ENSCING00000011388	-	87	57.632	ENSGMOG00000006925	dbr1	80	52.444	Gadus_morhua
ENSCING00000011388	-	100	49.433	ENSGALG00000043797	DBR1	80	49.433	Gallus_gallus
ENSCING00000011388	-	87	59.737	ENSGAFG00000001046	dbr1	81	54.853	Gambusia_affinis
ENSCING00000011388	-	87	57.632	ENSGACG00000009122	dbr1	79	52.608	Gasterosteus_aculeatus
ENSCING00000011388	-	100	54.810	ENSGAGG00000001244	DBR1	82	55.481	Gopherus_agassizii
ENSCING00000011388	-	98	49.192	ENSGGOG00000004564	DBR1	80	48.636	Gorilla_gorilla
ENSCING00000011388	-	87	59.474	ENSHBUG00000000882	dbr1	79	54.279	Haplochromis_burtoni
ENSCING00000011388	-	100	52.500	ENSHGLG00000014529	Dbr1	81	52.500	Heterocephalus_glaber_female
ENSCING00000011388	-	100	52.500	ENSHGLG00100013202	Dbr1	81	52.500	Heterocephalus_glaber_male
ENSCING00000011388	-	97	55.530	ENSHCOG00000004179	dbr1	80	55.281	Hippocampus_comes
ENSCING00000011388	-	98	53.636	ENSIPUG00000023749	dbr1	77	53.691	Ictalurus_punctatus
ENSCING00000011388	-	98	53.811	ENSSTOG00000007122	DBR1	80	52.955	Ictidomys_tridecemlineatus
ENSCING00000011388	-	100	53.409	ENSJJAG00000017080	Dbr1	80	53.409	Jaculus_jaculus
ENSCING00000011388	-	87	57.895	ENSKMAG00000004869	dbr1	80	52.655	Kryptolebias_marmoratus
ENSCING00000011388	-	89	57.106	ENSLBEG00000021307	dbr1	78	53.167	Labrus_bergylta
ENSCING00000011388	-	98	54.977	ENSLACG00000005547	DBR1	81	54.933	Latimeria_chalumnae
ENSCING00000011388	-	90	54.822	ENSLOCG00000004160	dbr1	79	51.577	Lepisosteus_oculatus
ENSCING00000011388	-	99	53.531	ENSLAFG00000005827	DBR1	80	53.531	Loxodonta_africana
ENSCING00000011388	-	98	54.042	ENSMFAG00000043642	DBR1	81	53.409	Macaca_fascicularis
ENSCING00000011388	-	98	54.042	ENSMMUG00000021284	DBR1	81	53.409	Macaca_mulatta
ENSCING00000011388	-	98	54.042	ENSMNEG00000041740	DBR1	81	53.409	Macaca_nemestrina
ENSCING00000011388	-	91	43.970	ENSMLEG00000034542	DBR1	70	45.576	Mandrillus_leucophaeus
ENSCING00000011388	-	100	51.991	ENSMAMG00000012205	dbr1	79	52.349	Mastacembelus_armatus
ENSCING00000011388	-	87	59.843	ENSMZEG00005021338	dbr1	79	54.607	Maylandia_zebra
ENSCING00000011388	-	75	52.395	ENSMGAG00000002142	DBR1	77	51.796	Meleagris_gallopavo
ENSCING00000011388	-	98	54.042	ENSMAUG00000010037	Dbr1	81	53.636	Mesocricetus_auratus
ENSCING00000011388	-	98	54.483	ENSMICG00000049533	DBR1	80	54.072	Microcebus_murinus
ENSCING00000011388	-	98	52.656	ENSMOCG00000018746	Dbr1	82	52.273	Microtus_ochrogaster
ENSCING00000011388	-	87	58.747	ENSMMOG00000000719	dbr1	79	53.097	Mola_mola
ENSCING00000011388	-	100	55.353	ENSMODG00000018554	DBR1	80	55.353	Monodelphis_domestica
ENSCING00000011388	-	98	53.075	ENSMALG00000022283	dbr1	77	52.915	Monopterus_albus
ENSCING00000011388	-	98	53.409	MGP_CAROLIEiJ_G0032564	Dbr1	98	57.317	Mus_caroli
ENSCING00000011388	-	98	52.765	ENSMUSG00000032469	Dbr1	98	57.317	Mus_musculus
ENSCING00000011388	-	98	52.887	MGP_PahariEiJ_G0015433	Dbr1	98	57.317	Mus_pahari
ENSCING00000011388	-	98	52.765	MGP_SPRETEiJ_G0033708	Dbr1	98	57.317	Mus_spretus
ENSCING00000011388	-	98	54.734	ENSMPUG00000009230	DBR1	81	54.091	Mustela_putorius_furo
ENSCING00000011388	-	98	54.483	ENSMLUG00000026117	DBR1	80	54.072	Myotis_lucifugus
ENSCING00000011388	-	89	56.555	ENSNGAG00000003518	Dbr1	80	53.167	Nannospalax_galili
ENSCING00000011388	-	87	59.474	ENSNBRG00000016318	dbr1	79	54.279	Neolamprologus_brichardi
ENSCING00000011388	-	98	53.580	ENSNLEG00000032263	DBR1	79	52.955	Nomascus_leucogenys
ENSCING00000011388	-	100	54.670	ENSMEUG00000009188	DBR1	80	54.670	Notamacropus_eugenii
ENSCING00000011388	-	90	49.370	ENSOPRG00000016510	DBR1	78	49.370	Ochotona_princeps
ENSCING00000011388	-	100	54.279	ENSODEG00000018178	DBR1	81	54.279	Octodon_degus
ENSCING00000011388	-	87	59.843	ENSONIG00000013801	dbr1	79	54.362	Oreochromis_niloticus
ENSCING00000011388	-	84	53.243	ENSOANG00000007783	DBR1	76	53.050	Ornithorhynchus_anatinus
ENSCING00000011388	-	91	53.846	ENSOCUG00000015129	DBR1	71	53.415	Oryctolagus_cuniculus
ENSCING00000011388	-	98	53.687	ENSORLG00015001112	dbr1	81	53.687	Oryzias_latipes_hsok
ENSCING00000011388	-	98	53.147	ENSOMEG00000000857	dbr1	82	53.687	Oryzias_melastigma
ENSCING00000011388	-	98	53.118	ENSOGAG00000033095	DBR1	80	52.500	Otolemur_garnettii
ENSCING00000011388	-	99	52.834	ENSOARG00000007589	DBR1	80	52.834	Ovis_aries
ENSCING00000011388	-	98	53.811	ENSPPAG00000031137	DBR1	80	53.182	Pan_paniscus
ENSCING00000011388	-	98	54.338	ENSPPRG00000013629	DBR1	81	53.708	Panthera_pardus
ENSCING00000011388	-	96	53.521	ENSPTIG00000012674	DBR1	78	52.887	Panthera_tigris_altaica
ENSCING00000011388	-	98	54.042	ENSPTRG00000015441	DBR1	80	53.409	Pan_troglodytes
ENSCING00000011388	-	98	54.042	ENSPANG00000012664	DBR1	81	53.409	Papio_anubis
ENSCING00000011388	-	99	52.252	ENSPKIG00000000310	dbr1	69	55.528	Paramormyrops_kingsleyae
ENSCING00000011388	-	85	54.667	ENSPSIG00000015486	DBR1	79	54.474	Pelodiscus_sinensis
ENSCING00000011388	-	98	53.580	ENSPEMG00000020602	Dbr1	80	53.075	Peromyscus_maniculatus_bairdii
ENSCING00000011388	-	87	50.900	ENSPMAG00000008620	dbr1	99	50.900	Petromyzon_marinus
ENSCING00000011388	-	100	54.442	ENSPCIG00000006494	DBR1	80	54.442	Phascolarctos_cinereus
ENSCING00000011388	-	97	54.817	ENSPLAG00000011665	dbr1	81	54.586	Poecilia_latipinna
ENSCING00000011388	-	50	47.085	ENSPMEG00000020884	-	68	42.308	Poecilia_mexicana
ENSCING00000011388	-	87	59.635	ENSPMEG00000010080	dbr1	81	54.810	Poecilia_mexicana
ENSCING00000011388	-	87	59.635	ENSPREG00000020157	dbr1	81	54.343	Poecilia_reticulata
ENSCING00000011388	-	98	53.811	ENSPPYG00000014139	DBR1	80	53.182	Pongo_abelii
ENSCING00000011388	-	87	57.218	ENSPCAG00000012956	DBR1	97	57.218	Procavia_capensis
ENSCING00000011388	-	98	54.483	ENSPCOG00000016894	DBR1	80	54.072	Propithecus_coquereli
ENSCING00000011388	-	98	47.126	ENSPVAG00000007713	DBR1	81	46.606	Pteropus_vampyrus
ENSCING00000011388	-	87	59.737	ENSPNYG00000015453	dbr1	79	54.505	Pundamilia_nyererei
ENSCING00000011388	-	88	57.292	ENSPNAG00000025595	dbr1	78	51.885	Pygocentrus_nattereri
ENSCING00000011388	-	98	53.118	ENSRNOG00000014588	Dbr1	80	52.727	Rattus_norvegicus
ENSCING00000011388	-	98	53.811	ENSRBIG00000045002	DBR1	80	53.182	Rhinopithecus_bieti
ENSCING00000011388	-	98	53.811	ENSRROG00000044819	DBR1	80	53.182	Rhinopithecus_roxellana
ENSCING00000011388	-	69	38.202	YKL149C	DBR1	87	38.202	Saccharomyces_cerevisiae
ENSCING00000011388	-	100	53.636	ENSSBOG00000032048	DBR1	81	53.636	Saimiri_boliviensis_boliviensis
ENSCING00000011388	-	100	54.670	ENSSHAG00000006752	DBR1	80	54.670	Sarcophilus_harrisii
ENSCING00000011388	-	98	52.154	ENSSFOG00015011410	dbr1	83	52.154	Scleropages_formosus
ENSCING00000011388	-	87	58.684	ENSSMAG00000016078	dbr1	80	53.007	Scophthalmus_maximus
ENSCING00000011388	-	87	58.854	ENSSDUG00000017849	dbr1	66	58.854	Seriola_dumerili
ENSCING00000011388	-	87	58.073	ENSSLDG00000019891	dbr1	67	58.073	Seriola_lalandi_dorsalis
ENSCING00000011388	-	99	50.917	ENSSARG00000009558	-	81	50.917	Sorex_araneus
ENSCING00000011388	-	85	52.815	ENSSPUG00000004724	DBR1	73	52.105	Sphenodon_punctatus
ENSCING00000011388	-	87	59.635	ENSSPAG00000016892	dbr1	80	54.036	Stegastes_partitus
ENSCING00000011388	-	100	53.846	ENSSSCG00000031098	DBR1	81	53.846	Sus_scrofa
ENSCING00000011388	-	96	52.817	ENSTGUG00000007073	DBR1	81	53.162	Taeniopygia_guttata
ENSCING00000011388	-	100	54.607	ENSTRUG00000021594	dbr1	78	54.607	Takifugu_rubripes
ENSCING00000011388	-	99	53.829	ENSTNIG00000006710	dbr1	80	53.675	Tetraodon_nigroviridis
ENSCING00000011388	-	99	54.462	ENSTTRG00000004020	DBR1	80	54.462	Tursiops_truncatus
ENSCING00000011388	-	98	54.965	ENSUAMG00000004639	DBR1	81	54.318	Ursus_americanus
ENSCING00000011388	-	98	54.734	ENSUMAG00000015012	DBR1	81	54.091	Ursus_maritimus
ENSCING00000011388	-	90	51.399	ENSVPAG00000011711	DBR1	80	49.545	Vicugna_pacos
ENSCING00000011388	-	98	55.427	ENSVVUG00000026604	DBR1	81	54.773	Vulpes_vulpes
ENSCING00000011388	-	98	56.019	ENSXETG00000027491	dbr1	82	55.809	Xenopus_tropicalis
ENSCING00000011388	-	87	59.635	ENSXCOG00000018078	dbr1	81	54.810	Xiphophorus_couchianus
ENSCING00000011388	-	87	59.635	ENSXMAG00000007311	dbr1	81	54.810	Xiphophorus_maculatus