EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011420 (Gene tree)
Gene ID: 100176776
Gene Symbol: -
Alias: -
Full Name: uncharacterized HIT-like protein slr1234
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1585 bases
Position: chr2:4741325-4742909
Accession: 100176776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000021825	DcpS_C	PF11969.8	5.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022071	-	823	XM_002125141	ENSCINP00000021825	174 (aa)	XP_002125177	F7AX27

Gene Model

Click here to download ENSCING00000011420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011420	-	75	59.542	ENSG00000137133	HINT2	80	59.542	Homo_sapiens
ENSCING00000011420	-	72	65.079	ENSAPOG00000005822	hint2	97	66.667	Acanthochromis_polyacanthus
ENSCING00000011420	-	75	58.015	ENSAMEG00000009919	HINT2	80	58.015	Ailuropoda_melanoleuca
ENSCING00000011420	-	74	64.341	ENSACIG00000024176	hint2	83	64.341	Amphilophus_citrinellus
ENSCING00000011420	-	74	62.791	ENSAOCG00000018892	hint2	98	62.698	Amphiprion_ocellaris
ENSCING00000011420	-	74	62.791	ENSAPEG00000012800	hint2	84	62.791	Amphiprion_percula
ENSCING00000011420	-	74	64.844	ENSATEG00000001240	hint2	81	64.844	Anabas_testudineus
ENSCING00000011420	-	52	70.000	ENSACAG00000003036	HINT2	87	70.000	Anolis_carolinensis
ENSCING00000011420	-	74	59.690	ENSANAG00000036887	HINT2	96	49.398	Aotus_nancymaae
ENSCING00000011420	-	74	64.341	ENSACLG00000020144	hint2	90	64.341	Astatotilapia_calliptera
ENSCING00000011420	-	75	63.846	ENSAMXG00000016137	hint2	79	63.846	Astyanax_mexicanus
ENSCING00000011420	-	75	59.542	ENSBTAG00000011444	HINT2	85	60.465	Bos_taurus
ENSCING00000011420	-	75	58.015	ENSCJAG00000010068	HINT2	80	58.015	Callithrix_jacchus
ENSCING00000011420	-	73	61.417	ENSCAFG00000002240	HINT2	77	61.417	Canis_familiaris
ENSCING00000011420	-	73	57.480	ENSCAFG00020017487	HINT2	76	57.480	Canis_lupus_dingo
ENSCING00000011420	-	75	58.779	ENSCHIG00000010130	HINT2	80	58.779	Capra_hircus
ENSCING00000011420	-	75	58.015	ENSTSYG00000030020	-	80	58.015	Carlito_syrichta
ENSCING00000011420	-	74	55.814	ENSTSYG00000000640	-	83	54.962	Carlito_syrichta
ENSCING00000011420	-	75	58.015	ENSCAPG00000007065	HINT2	89	58.015	Cavia_aperea
ENSCING00000011420	-	75	58.015	ENSCPOG00000040327	HINT2	87	55.319	Cavia_porcellus
ENSCING00000011420	-	74	59.690	ENSCCAG00000023291	HINT2	80	58.779	Cebus_capucinus
ENSCING00000011420	-	74	59.375	ENSCATG00000033387	HINT2	79	59.375	Cercocebus_atys
ENSCING00000011420	-	55	45.833	ENSCLAG00000013492	-	92	45.833	Chinchilla_lanigera
ENSCING00000011420	-	74	60.938	ENSCLAG00000002682	-	77	60.938	Chinchilla_lanigera
ENSCING00000011420	-	75	58.779	ENSCSAG00000010622	HINT2	80	58.779	Chlorocebus_sabaeus
ENSCING00000011420	-	78	60.000	ENSCPBG00000002797	HINT2	91	64.228	Chrysemys_picta_bellii
ENSCING00000011420	-	74	56.923	ENSCING00000023160	-	99	56.923	Ciona_intestinalis
ENSCING00000011420	-	100	68.391	ENSCSAVG00000006544	-	100	68.391	Ciona_savignyi
ENSCING00000011420	-	78	58.519	ENSCSAVG00000008721	-	99	58.519	Ciona_savignyi
ENSCING00000011420	-	74	58.915	ENSCANG00000042118	HINT2	79	58.915	Colobus_angolensis_palliatus
ENSCING00000011420	-	75	58.015	ENSCGRG00001022361	Hint2	80	58.015	Cricetulus_griseus_chok1gshd
ENSCING00000011420	-	90	49.383	ENSCGRG00000017831	Hint2	99	49.383	Cricetulus_griseus_crigri
ENSCING00000011420	-	72	57.600	ENSCSEG00000003930	hint1	98	57.600	Cynoglossus_semilaevis
ENSCING00000011420	-	74	64.844	ENSCSEG00000018825	hint2	92	66.379	Cynoglossus_semilaevis
ENSCING00000011420	-	74	55.039	ENSCVAG00000013656	hint1	99	55.039	Cyprinodon_variegatus
ENSCING00000011420	-	74	64.341	ENSCVAG00000015693	hint2	88	64.341	Cyprinodon_variegatus
ENSCING00000011420	-	80	62.143	ENSDARG00000100938	hint2	86	62.143	Danio_rerio
ENSCING00000011420	-	74	59.690	ENSDARG00000103824	hint1	99	59.690	Danio_rerio
ENSCING00000011420	-	63	65.455	ENSDNOG00000009083	HINT2	79	60.305	Dasypus_novemcinctus
ENSCING00000011420	-	75	58.015	ENSDORG00000006268	Hint2	80	58.015	Dipodomys_ordii
ENSCING00000011420	-	83	53.289	FBgn0031459	CG2862	98	59.843	Drosophila_melanogaster
ENSCING00000011420	-	74	57.364	ENSETEG00000017929	HINT2	77	60.156	Echinops_telfairi
ENSCING00000011420	-	73	61.417	ENSEBUG00000015709	-	98	61.417	Eptatretus_burgeri
ENSCING00000011420	-	96	54.118	ENSEBUG00000009253	hint2	98	54.118	Eptatretus_burgeri
ENSCING00000011420	-	74	57.031	ENSEASG00005014042	HINT2	77	57.031	Equus_asinus_asinus
ENSCING00000011420	-	75	54.962	ENSECAG00000000037	HINT2	80	54.962	Equus_caballus
ENSCING00000011420	-	74	60.465	ENSEEUG00000011866	HINT2	95	60.465	Erinaceus_europaeus
ENSCING00000011420	-	74	57.364	ENSELUG00000016515	hint1	99	57.364	Esox_lucius
ENSCING00000011420	-	79	62.774	ENSELUG00000014618	HINT2	84	65.116	Esox_lucius
ENSCING00000011420	-	74	59.375	ENSFCAG00000012755	HINT2	77	60.465	Felis_catus
ENSCING00000011420	-	66	64.912	ENSFALG00000000137	HINT2	100	64.912	Ficedula_albicollis
ENSCING00000011420	-	75	58.779	ENSFDAG00000007090	HINT2	80	58.779	Fukomys_damarensis
ENSCING00000011420	-	82	53.521	ENSFHEG00000001761	hint1	78	53.521	Fundulus_heteroclitus
ENSCING00000011420	-	74	64.341	ENSFHEG00000004041	hint2	70	64.341	Fundulus_heteroclitus
ENSCING00000011420	-	65	61.062	ENSGMOG00000005105	hint1	90	61.062	Gadus_morhua
ENSCING00000011420	-	73	62.205	ENSGALG00000027418	-	80	62.205	Gallus_gallus
ENSCING00000011420	-	65	61.062	ENSGAFG00000001228	hint1	90	61.062	Gambusia_affinis
ENSCING00000011420	-	74	65.891	ENSGAFG00000016884	hint2	98	65.873	Gambusia_affinis
ENSCING00000011420	-	75	59.542	ENSGGOG00000011265	HINT2	80	59.542	Gorilla_gorilla
ENSCING00000011420	-	74	64.341	ENSHBUG00000007106	hint2	90	64.341	Haplochromis_burtoni
ENSCING00000011420	-	74	58.594	ENSHGLG00000018803	HINT2	77	58.594	Heterocephalus_glaber_female
ENSCING00000011420	-	75	56.489	ENSHGLG00100009260	HINT2	80	56.489	Heterocephalus_glaber_male
ENSCING00000011420	-	74	62.500	ENSHCOG00000008201	hint2	98	62.500	Hippocampus_comes
ENSCING00000011420	-	97	53.801	ENSIPUG00000015540	Hint2	99	53.801	Ictalurus_punctatus
ENSCING00000011420	-	74	58.140	ENSIPUG00000003460	hint1	99	58.140	Ictalurus_punctatus
ENSCING00000011420	-	63	65.455	ENSSTOG00000006975	HINT2	77	60.938	Ictidomys_tridecemlineatus
ENSCING00000011420	-	72	61.600	ENSJJAG00000005863	Hint2	84	61.600	Jaculus_jaculus
ENSCING00000011420	-	78	65.441	ENSKMAG00000007624	hint2	99	65.441	Kryptolebias_marmoratus
ENSCING00000011420	-	74	65.625	ENSLBEG00000026254	hint2	84	65.625	Labrus_bergylta
ENSCING00000011420	-	75	61.940	ENSLACG00000013400	HINT2	94	61.481	Latimeria_chalumnae
ENSCING00000011420	-	71	64.516	ENSLOCG00000011981	hint2	98	64.516	Lepisosteus_oculatus
ENSCING00000011420	-	76	56.391	ENSLAFG00000015022	HINT2	82	56.391	Loxodonta_africana
ENSCING00000011420	-	75	58.779	ENSMFAG00000034091	HINT2	80	58.779	Macaca_fascicularis
ENSCING00000011420	-	75	58.779	ENSMMUG00000016337	HINT2	80	58.779	Macaca_mulatta
ENSCING00000011420	-	75	58.779	ENSMNEG00000044230	HINT2	80	58.779	Macaca_nemestrina
ENSCING00000011420	-	74	59.690	ENSMLEG00000029409	HINT2	95	59.690	Mandrillus_leucophaeus
ENSCING00000011420	-	74	62.016	ENSMAMG00000006530	hint2	83	62.016	Mastacembelus_armatus
ENSCING00000011420	-	74	64.341	ENSMZEG00005013690	hint2	90	64.341	Maylandia_zebra
ENSCING00000011420	-	75	57.252	ENSMAUG00000008164	Hint2	80	57.252	Mesocricetus_auratus
ENSCING00000011420	-	74	58.915	ENSMICG00000002572	HINT2	80	58.015	Microcebus_murinus
ENSCING00000011420	-	75	58.015	ENSMOCG00000022371	Hint2	80	58.015	Microtus_ochrogaster
ENSCING00000011420	-	74	61.240	ENSMMOG00000017956	hint2	71	61.240	Mola_mola
ENSCING00000011420	-	74	56.589	ENSMMOG00000007854	hint1	99	56.589	Mola_mola
ENSCING00000011420	-	74	63.281	ENSMODG00000006947	HINT2	98	63.281	Monodelphis_domestica
ENSCING00000011420	-	68	57.983	ENSMALG00000001063	hint1	94	57.983	Monopterus_albus
ENSCING00000011420	-	74	64.341	ENSMALG00000005121	hint2	79	64.341	Monopterus_albus
ENSCING00000011420	-	75	56.489	MGP_CAROLIEiJ_G0025948	Hint2	80	56.489	Mus_caroli
ENSCING00000011420	-	75	56.489	ENSMUSG00000028470	Hint2	80	56.489	Mus_musculus
ENSCING00000011420	-	74	58.140	MGP_PahariEiJ_G0024093	Hint2	79	58.140	Mus_pahari
ENSCING00000011420	-	75	56.489	MGP_SPRETEiJ_G0026909	Hint2	80	56.489	Mus_spretus
ENSCING00000011420	-	75	53.435	ENSMPUG00000005589	HINT2	80	53.435	Mustela_putorius_furo
ENSCING00000011420	-	75	59.542	ENSMLUG00000023856	HINT2	80	59.542	Myotis_lucifugus
ENSCING00000011420	-	74	59.690	ENSNGAG00000003065	Hint2	80	58.779	Nannospalax_galili
ENSCING00000011420	-	74	64.844	ENSNBRG00000022918	hint2	99	65.254	Neolamprologus_brichardi
ENSCING00000011420	-	75	58.779	ENSNLEG00000033123	HINT2	96	49.398	Nomascus_leucogenys
ENSCING00000011420	-	63	65.455	ENSODEG00000013829	HINT2	77	60.938	Octodon_degus
ENSCING00000011420	-	75	58.015	ENSOCUG00000027206	-	78	58.015	Oryctolagus_cuniculus
ENSCING00000011420	-	75	54.962	ENSOCUG00000006472	-	80	54.962	Oryctolagus_cuniculus
ENSCING00000011420	-	74	64.062	ENSORLG00000001235	hint2	70	64.062	Oryzias_latipes
ENSCING00000011420	-	74	64.062	ENSORLG00020009336	hint2	92	67.273	Oryzias_latipes_hni
ENSCING00000011420	-	91	55.215	ENSORLG00015018872	hint2	96	64.167	Oryzias_latipes_hsok
ENSCING00000011420	-	77	60.448	ENSOMEG00000012866	hint2	89	60.448	Oryzias_melastigma
ENSCING00000011420	-	63	64.545	ENSOGAG00000011830	HINT2	77	60.156	Otolemur_garnettii
ENSCING00000011420	-	75	58.779	ENSOARG00000011729	HINT2	80	58.779	Ovis_aries
ENSCING00000011420	-	75	59.542	ENSPPAG00000002836	HINT2	80	59.542	Pan_paniscus
ENSCING00000011420	-	75	56.489	ENSPPRG00000020701	HINT2	77	59.375	Panthera_pardus
ENSCING00000011420	-	74	57.364	ENSPTIG00000015400	HINT2	81	59.375	Panthera_tigris_altaica
ENSCING00000011420	-	75	59.542	ENSPTRG00000020923	HINT2	80	59.542	Pan_troglodytes
ENSCING00000011420	-	74	59.690	ENSPANG00000025487	HINT2	79	59.690	Papio_anubis
ENSCING00000011420	-	80	53.061	ENSPKIG00000021119	hint1	99	53.061	Paramormyrops_kingsleyae
ENSCING00000011420	-	78	62.500	ENSPKIG00000024049	hint2	97	63.636	Paramormyrops_kingsleyae
ENSCING00000011420	-	74	62.500	ENSPMGG00000006589	hint2	93	63.248	Periophthalmus_magnuspinnatus
ENSCING00000011420	-	75	57.252	ENSPEMG00000014390	Hint2	80	57.252	Peromyscus_maniculatus_bairdii
ENSCING00000011420	-	74	61.832	ENSPMAG00000002715	hint2	75	61.832	Petromyzon_marinus
ENSCING00000011420	-	75	57.252	ENSPMAG00000006075	hint1	87	57.252	Petromyzon_marinus
ENSCING00000011420	-	74	56.589	ENSPFOG00000012020	hint1	99	56.589	Poecilia_formosa
ENSCING00000011420	-	74	64.341	ENSPFOG00000007209	hint2	79	64.341	Poecilia_formosa
ENSCING00000011420	-	89	56.494	ENSPLAG00000004768	hint2	97	66.102	Poecilia_latipinna
ENSCING00000011420	-	65	61.062	ENSPLAG00000003800	hint1	90	61.062	Poecilia_latipinna
ENSCING00000011420	-	87	53.293	ENSPMEG00000017523	hint2	100	53.293	Poecilia_mexicana
ENSCING00000011420	-	74	56.589	ENSPMEG00000016327	hint1	99	56.589	Poecilia_mexicana
ENSCING00000011420	-	74	56.589	ENSPREG00000003867	hint1	99	56.589	Poecilia_reticulata
ENSCING00000011420	-	76	64.394	ENSPREG00000008004	hint2	100	54.878	Poecilia_reticulata
ENSCING00000011420	-	75	58.779	ENSPPYG00000019082	HINT2	96	52.564	Pongo_abelii
ENSCING00000011420	-	74	59.690	ENSPCOG00000023948	HINT2	79	59.690	Propithecus_coquereli
ENSCING00000011420	-	75	60.305	ENSPVAG00000003028	HINT2	79	60.305	Pteropus_vampyrus
ENSCING00000011420	-	74	64.844	ENSPNYG00000017024	hint2	99	64.844	Pundamilia_nyererei
ENSCING00000011420	-	78	61.765	ENSPNAG00000029879	hint2	89	61.765	Pygocentrus_nattereri
ENSCING00000011420	-	75	56.489	ENSRNOG00000015866	Hint2	80	56.489	Rattus_norvegicus
ENSCING00000011420	-	75	58.779	ENSRBIG00000044870	HINT2	96	51.923	Rhinopithecus_bieti
ENSCING00000011420	-	75	58.779	ENSRROG00000035123	HINT2	96	51.923	Rhinopithecus_roxellana
ENSCING00000011420	-	72	60.000	ENSSBOG00000025840	HINT2	96	49.398	Saimiri_boliviensis_boliviensis
ENSCING00000011420	-	63	69.091	ENSSHAG00000013965	HINT2	91	64.844	Sarcophilus_harrisii
ENSCING00000011420	-	74	51.938	ENSSHAG00000012507	-	99	51.938	Sarcophilus_harrisii
ENSCING00000011420	-	93	51.553	ENSSFOG00015001540	hint2	99	52.795	Scleropages_formosus
ENSCING00000011420	-	74	62.791	ENSSMAG00000008382	hint2	72	62.791	Scophthalmus_maximus
ENSCING00000011420	-	74	63.566	ENSSDUG00000022415	hint2	72	63.566	Seriola_dumerili
ENSCING00000011420	-	74	62.791	ENSSLDG00000004617	hint2	90	64.655	Seriola_lalandi_dorsalis
ENSCING00000011420	-	75	62.595	ENSSPAG00000013723	hint2	70	62.595	Stegastes_partitus
ENSCING00000011420	-	66	64.912	ENSTGUG00000001823	HINT2	100	64.912	Taeniopygia_guttata
ENSCING00000011420	-	72	61.600	ENSTRUG00000009900	hint1	98	61.600	Takifugu_rubripes
ENSCING00000011420	-	74	61.240	ENSTRUG00000023015	hint2	96	61.667	Takifugu_rubripes
ENSCING00000011420	-	74	63.281	ENSTNIG00000015580	hint2	79	63.281	Tetraodon_nigroviridis
ENSCING00000011420	-	75	57.252	ENSTBEG00000013020	HINT2	80	57.252	Tupaia_belangeri
ENSCING00000011420	-	74	59.690	ENSTTRG00000011932	HINT2	79	59.690	Tursiops_truncatus
ENSCING00000011420	-	74	60.156	ENSUAMG00000009907	HINT2	56	60.156	Ursus_americanus
ENSCING00000011420	-	75	58.015	ENSUMAG00000007451	HINT2	78	58.015	Ursus_maritimus
ENSCING00000011420	-	74	58.915	ENSVPAG00000005592	HINT2	80	58.015	Vicugna_pacos
ENSCING00000011420	-	74	57.031	ENSVVUG00000020192	HINT2	51	57.031	Vulpes_vulpes
ENSCING00000011420	-	59	54.717	ENSXETG00000005083	hint2	65	54.717	Xenopus_tropicalis
ENSCING00000011420	-	74	65.625	ENSXCOG00000009621	hint2	97	64.516	Xiphophorus_couchianus
ENSCING00000011420	-	65	61.062	ENSXMAG00000023903	hint1	90	61.062	Xiphophorus_maculatus
ENSCING00000011420	-	74	65.116	ENSXMAG00000026925	hint2	81	65.116	Xiphophorus_maculatus