EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011436 (Gene tree)
Gene ID: 100175065
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC100175065
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2325 bases
Position: chr2:3259942-3262266
Accession: 100175065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000021853	Ribosomal_L30	PF00327.20	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022099	-	842	-	ENSCINP00000021853	243 (aa)	XP_002120418	F7AD61

Gene Model

Click here to download ENSCING00000011436's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011436	-	88	75.117	ENSCSAVG00000002155	-	100	75.117	Ciona_savignyi
ENSCING00000011436	-	57	31.469	ENSDARG00000069850	mrpl30	93	31.469	Danio_rerio
ENSCING00000011436	-	59	30.769	ENSMAMG00000016802	mrpl30	96	30.769	Mastacembelus_armatus
ENSCING00000011436	-	63	30.128	ENSORLG00000025091	mrpl30	82	30.128	Oryzias_latipes