EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011490 (Gene tree)
Gene ID: 100184605
Gene Symbol: -
Alias: -
Full Name: U6 snRNA phosphodiesterase-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1347 bases
Position: chr2:3198632-3199978
Accession: 100184605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000021935	HVSL	PF09749.9	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022181	-	1029	XM_002131250	ENSCINP00000021935	262 (aa)	XP_002131286	F6WVC9

Gene Model

Click here to download ENSCING00000011490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011490	-	82	30.531	ENSG00000103005	USB1	98	30.531	Homo_sapiens
ENSCING00000011490	-	86	31.250	ENSAMEG00000017205	USB1	83	31.250	Ailuropoda_melanoleuca
ENSCING00000011490	-	88	33.193	ENSATEG00000009348	usb1	80	34.310	Anabas_testudineus
ENSCING00000011490	-	87	30.290	ENSANAG00000035640	USB1	85	30.290	Aotus_nancymaae
ENSCING00000011490	-	92	32.099	ENSAMXG00000040146	usb1	76	32.340	Astyanax_mexicanus
ENSCING00000011490	-	98	31.884	ENSBTAG00000015758	USB1	84	34.468	Bos_taurus
ENSCING00000011490	-	86	31.381	ENSCAFG00000008556	USB1	60	31.381	Canis_familiaris
ENSCING00000011490	-	98	30.627	ENSCHIG00000024290	USB1	84	33.043	Capra_hircus
ENSCING00000011490	-	86	30.962	ENSTSYG00000006997	USB1	84	30.962	Carlito_syrichta
ENSCING00000011490	-	98	30.389	ENSCPOG00000014325	USB1	85	31.837	Cavia_porcellus
ENSCING00000011490	-	58	30.719	ENSCLAG00000007363	USB1	84	31.126	Chinchilla_lanigera
ENSCING00000011490	-	98	62.016	ENSCSAVG00000000894	-	94	62.016	Ciona_savignyi
ENSCING00000011490	-	79	35.407	ENSCVAG00000009252	usb1	97	32.906	Cyprinodon_variegatus
ENSCING00000011490	-	90	32.794	ENSDARG00000003841	usb1	81	33.333	Danio_rerio
ENSCING00000011490	-	85	33.766	ENSDORG00000001888	Usb1	83	33.766	Dipodomys_ordii
ENSCING00000011490	-	90	30.290	ENSEBUG00000005889	usb1	81	30.290	Eptatretus_burgeri
ENSCING00000011490	-	86	30.932	ENSFCAG00000002693	USB1	84	30.932	Felis_catus
ENSCING00000011490	-	89	30.738	ENSFALG00000006876	USB1	86	30.738	Ficedula_albicollis
ENSCING00000011490	-	98	30.935	ENSFDAG00000010052	USB1	84	32.906	Fukomys_damarensis
ENSCING00000011490	-	76	35.437	ENSFHEG00000012334	usb1	80	35.437	Fundulus_heteroclitus
ENSCING00000011490	-	86	32.314	ENSGMOG00000004228	usb1	99	32.314	Gadus_morhua
ENSCING00000011490	-	87	32.245	ENSGAFG00000021890	usb1	82	32.794	Gambusia_affinis
ENSCING00000011490	-	87	30.213	ENSGACG00000003257	usb1	81	31.933	Gasterosteus_aculeatus
ENSCING00000011490	-	81	33.486	ENSHCOG00000015633	usb1	86	32.189	Hippocampus_comes
ENSCING00000011490	-	86	30.962	ENSSTOG00000007548	USB1	82	30.962	Ictidomys_tridecemlineatus
ENSCING00000011490	-	98	31.250	ENSJJAG00000021859	Usb1	87	33.054	Jaculus_jaculus
ENSCING00000011490	-	89	31.250	ENSKMAG00000007200	usb1	81	31.535	Kryptolebias_marmoratus
ENSCING00000011490	-	73	31.122	ENSLBEG00000008452	usb1	80	31.250	Labrus_bergylta
ENSCING00000011490	-	74	33.663	ENSLACG00000000105	USB1	66	34.158	Latimeria_chalumnae
ENSCING00000011490	-	87	30.472	ENSMAMG00000015092	usb1	81	31.602	Mastacembelus_armatus
ENSCING00000011490	-	86	31.535	ENSMICG00000004900	USB1	84	31.535	Microcebus_murinus
ENSCING00000011490	-	92	31.474	ENSMMOG00000000490	usb1	87	32.627	Mola_mola
ENSCING00000011490	-	87	33.476	ENSMALG00000005930	usb1	79	33.476	Monopterus_albus
ENSCING00000011490	-	98	31.136	MGP_CAROLIEiJ_G0031421	Usb1	96	33.628	Mus_caroli
ENSCING00000011490	-	98	30.882	ENSMUSG00000031792	Usb1	84	32.314	Mus_musculus
ENSCING00000011490	-	89	31.646	MGP_PahariEiJ_G0023019	Usb1	97	33.333	Mus_pahari
ENSCING00000011490	-	86	34.894	ENSMLUG00000007400	USB1	97	34.894	Myotis_lucifugus
ENSCING00000011490	-	86	32.609	ENSNGAG00000009703	Usb1	83	32.609	Nannospalax_galili
ENSCING00000011490	-	81	30.233	ENSNBRG00000008747	usb1	95	30.233	Neolamprologus_brichardi
ENSCING00000011490	-	69	32.124	ENSNLEG00000003340	USB1	71	32.124	Nomascus_leucogenys
ENSCING00000011490	-	89	30.738	ENSOANG00000012118	USB1	97	30.738	Ornithorhynchus_anatinus
ENSCING00000011490	-	87	31.466	ENSORLG00000012479	usb1	82	31.760	Oryzias_latipes
ENSCING00000011490	-	87	31.897	ENSORLG00020018671	usb1	83	31.760	Oryzias_latipes_hni
ENSCING00000011490	-	87	31.034	ENSORLG00015009679	usb1	83	31.330	Oryzias_latipes_hsok
ENSCING00000011490	-	86	34.043	ENSOARG00000001107	USB1	85	34.043	Ovis_aries
ENSCING00000011490	-	86	30.932	ENSPPRG00000024797	USB1	84	30.932	Panthera_pardus
ENSCING00000011490	-	86	30.932	ENSPTIG00000007506	USB1	84	30.932	Panthera_tigris_altaica
ENSCING00000011490	-	82	30.531	ENSPTRG00000008172	USB1	98	30.531	Pan_troglodytes
ENSCING00000011490	-	95	34.363	ENSPKIG00000015109	usb1	76	35.294	Paramormyrops_kingsleyae
ENSCING00000011490	-	87	30.672	ENSPMGG00000017725	usb1	86	30.672	Periophthalmus_magnuspinnatus
ENSCING00000011490	-	86	30.472	ENSPEMG00000016183	Usb1	82	30.472	Peromyscus_maniculatus_bairdii
ENSCING00000011490	-	85	31.034	ENSPMAG00000000462	usb1	93	31.034	Petromyzon_marinus
ENSCING00000011490	-	95	32.567	ENSPFOG00000011130	usb1	81	34.310	Poecilia_formosa
ENSCING00000011490	-	95	32.567	ENSPLAG00000009820	usb1	81	33.891	Poecilia_latipinna
ENSCING00000011490	-	97	31.359	ENSPMEG00000006402	usb1	81	34.310	Poecilia_mexicana
ENSCING00000011490	-	80	31.950	ENSPREG00000001047	usb1	74	36.269	Poecilia_reticulata
ENSCING00000011490	-	69	30.412	ENSPPYG00000007401	USB1	71	30.412	Pongo_abelii
ENSCING00000011490	-	86	31.381	ENSPCOG00000022612	USB1	84	31.381	Propithecus_coquereli
ENSCING00000011490	-	98	30.303	ENSPNAG00000011736	usb1	76	31.878	Pygocentrus_nattereri
ENSCING00000011490	-	82	30.531	ENSRBIG00000044466	USB1	98	30.531	Rhinopithecus_bieti
ENSCING00000011490	-	97	33.977	ENSSFOG00015023663	usb1	70	34.632	Scleropages_formosus
ENSCING00000011490	-	89	31.356	ENSSDUG00000002949	usb1	83	33.043	Seriola_dumerili
ENSCING00000011490	-	87	32.174	ENSSLDG00000014174	usb1	80	33.190	Seriola_lalandi_dorsalis
ENSCING00000011490	-	79	32.870	ENSSPUG00000006741	USB1	95	35.047	Sphenodon_punctatus
ENSCING00000011490	-	87	31.197	ENSSPAG00000007484	usb1	79	31.489	Stegastes_partitus
ENSCING00000011490	-	86	33.333	ENSSSCG00000002807	USB1	83	33.333	Sus_scrofa
ENSCING00000011490	-	97	30.216	ENSTRUG00000021069	usb1	83	31.915	Takifugu_rubripes
ENSCING00000011490	-	97	30.712	ENSTNIG00000000626	usb1	83	31.739	Tetraodon_nigroviridis
ENSCING00000011490	-	86	31.250	ENSUAMG00000016823	USB1	83	31.250	Ursus_americanus
ENSCING00000011490	-	81	31.416	ENSUMAG00000021369	USB1	98	31.416	Ursus_maritimus
ENSCING00000011490	-	86	31.381	ENSVVUG00000023700	USB1	86	31.381	Vulpes_vulpes
ENSCING00000011490	-	95	32.812	ENSXETG00000013795	usb1	80	34.450	Xenopus_tropicalis
ENSCING00000011490	-	87	32.479	ENSXMAG00000024687	usb1	66	32.340	Xiphophorus_maculatus