EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011753 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1714 bases
Position: chr3:886123-887836
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000022325	CBF	PF03914.17	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022571	-	1536	-	ENSCINP00000022325	511 (aa)	-	F6TAD8

Gene Model

Click here to download ENSCING00000011753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011753	-	98	35.659	ENSG00000184967	NOC4L	97	35.659	Homo_sapiens
ENSCING00000011753	-	98	37.288	ENSAPOG00000007239	noc4l	98	37.288	Acanthochromis_polyacanthus
ENSCING00000011753	-	89	36.730	ENSAMEG00000013649	NOC4L	91	36.730	Ailuropoda_melanoleuca
ENSCING00000011753	-	98	37.100	ENSACIG00000009221	noc4l	89	37.100	Amphilophus_citrinellus
ENSCING00000011753	-	98	36.932	ENSAOCG00000022225	noc4l	98	36.932	Amphiprion_ocellaris
ENSCING00000011753	-	98	36.433	ENSAPEG00000005789	noc4l	94	36.534	Amphiprion_percula
ENSCING00000011753	-	96	36.293	ENSATEG00000020704	noc4l	92	36.653	Anabas_testudineus
ENSCING00000011753	-	83	37.757	ENSAPLG00000001340	NOC4L	97	37.757	Anas_platyrhynchos
ENSCING00000011753	-	96	37.575	ENSACAG00000007479	NOC4L	90	37.575	Anolis_carolinensis
ENSCING00000011753	-	97	35.088	ENSANAG00000035196	NOC4L	97	35.088	Aotus_nancymaae
ENSCING00000011753	-	97	36.994	ENSACLG00000020832	noc4l	95	36.994	Astatotilapia_calliptera
ENSCING00000011753	-	95	38.048	ENSAMXG00000008720	noc4l	93	38.048	Astyanax_mexicanus
ENSCING00000011753	-	97	36.595	ENSBTAG00000011889	NOC4L	97	36.595	Bos_taurus
ENSCING00000011753	-	89	37.209	ENSCJAG00000005405	NOC4L	85	36.998	Callithrix_jacchus
ENSCING00000011753	-	96	36.417	ENSCAFG00000006300	NOC4L	96	36.417	Canis_familiaris
ENSCING00000011753	-	96	36.417	ENSCAFG00020010316	NOC4L	96	36.614	Canis_lupus_dingo
ENSCING00000011753	-	97	36.187	ENSCHIG00000007775	NOC4L	97	36.187	Capra_hircus
ENSCING00000011753	-	88	37.037	ENSTSYG00000025452	NOC4L	93	37.037	Carlito_syrichta
ENSCING00000011753	-	84	38.356	ENSCAPG00000011665	NOC4L	98	38.356	Cavia_aperea
ENSCING00000011753	-	97	35.798	ENSCPOG00000021166	NOC4L	97	35.798	Cavia_porcellus
ENSCING00000011753	-	97	33.138	ENSCCAG00000029963	NOC4L	97	33.138	Cebus_capucinus
ENSCING00000011753	-	98	35.853	ENSCATG00000035699	NOC4L	97	35.659	Cercocebus_atys
ENSCING00000011753	-	97	34.630	ENSCLAG00000007550	NOC4L	97	34.630	Chinchilla_lanigera
ENSCING00000011753	-	98	35.659	ENSCSAG00000001865	NOC4L	97	35.465	Chlorocebus_sabaeus
ENSCING00000011753	-	95	37.624	ENSCPBG00000024642	NOC4L	97	37.427	Chrysemys_picta_bellii
ENSCING00000011753	-	98	32.816	ENSCANG00000037218	NOC4L	97	32.621	Colobus_angolensis_palliatus
ENSCING00000011753	-	99	35.564	ENSCGRG00001004291	Noc4l	99	35.564	Cricetulus_griseus_chok1gshd
ENSCING00000011753	-	91	36.929	ENSCGRG00000005706	Noc4l	96	36.929	Cricetulus_griseus_crigri
ENSCING00000011753	-	97	35.632	ENSCSEG00000003635	noc4l	97	35.632	Cynoglossus_semilaevis
ENSCING00000011753	-	97	37.236	ENSCVAG00000000047	noc4l	97	37.236	Cyprinodon_variegatus
ENSCING00000011753	-	97	36.133	ENSDARG00000045565	noc4l	96	36.133	Danio_rerio
ENSCING00000011753	-	97	44.186	ENSDNOG00000041813	NOC4L	83	42.857	Dasypus_novemcinctus
ENSCING00000011753	-	97	35.728	ENSDORG00000015155	Noc4l	97	35.728	Dipodomys_ordii
ENSCING00000011753	-	53	34.397	FBgn0029672	CG2875	56	34.397	Drosophila_melanogaster
ENSCING00000011753	-	77	38.557	ENSETEG00000006237	NOC4L	97	38.557	Echinops_telfairi
ENSCING00000011753	-	85	36.036	ENSEBUG00000001980	noc4l	96	36.036	Eptatretus_burgeri
ENSCING00000011753	-	97	35.977	ENSEASG00005016651	NOC4L	97	35.977	Equus_asinus_asinus
ENSCING00000011753	-	97	36.240	ENSECAG00000024217	NOC4L	97	36.240	Equus_caballus
ENSCING00000011753	-	96	39.417	ENSELUG00000010483	noc4l	94	39.417	Esox_lucius
ENSCING00000011753	-	97	35.938	ENSFCAG00000010783	NOC4L	97	35.938	Felis_catus
ENSCING00000011753	-	80	37.972	ENSFALG00000008259	NOC4L	97	37.589	Ficedula_albicollis
ENSCING00000011753	-	95	36.273	ENSFDAG00000001178	NOC4L	98	35.671	Fukomys_damarensis
ENSCING00000011753	-	97	38.004	ENSFHEG00000010492	noc4l	97	38.004	Fundulus_heteroclitus
ENSCING00000011753	-	95	36.527	ENSGMOG00000003087	noc4l	95	36.275	Gadus_morhua
ENSCING00000011753	-	97	34.247	ENSGALG00000002272	NOC4L	98	34.247	Gallus_gallus
ENSCING00000011753	-	91	38.716	ENSGAFG00000006565	noc4l	87	38.716	Gambusia_affinis
ENSCING00000011753	-	97	35.922	ENSGACG00000017577	noc4l	96	35.729	Gasterosteus_aculeatus
ENSCING00000011753	-	87	37.637	ENSGAGG00000016459	NOC4L	94	36.543	Gopherus_agassizii
ENSCING00000011753	-	98	35.853	ENSGGOG00000010266	NOC4L	97	35.853	Gorilla_gorilla
ENSCING00000011753	-	97	36.994	ENSHBUG00000001312	noc4l	95	36.994	Haplochromis_burtoni
ENSCING00000011753	-	97	35.992	ENSHGLG00000011672	NOC4L	97	35.992	Heterocephalus_glaber_female
ENSCING00000011753	-	97	35.992	ENSHGLG00100017890	NOC4L	97	35.992	Heterocephalus_glaber_male
ENSCING00000011753	-	96	36.471	ENSHCOG00000014284	noc4l	94	36.471	Hippocampus_comes
ENSCING00000011753	-	96	35.962	ENSIPUG00000010363	noc4l	95	35.962	Ictalurus_punctatus
ENSCING00000011753	-	96	34.381	ENSSTOG00000022612	NOC4L	97	34.381	Ictidomys_tridecemlineatus
ENSCING00000011753	-	96	36.346	ENSJJAG00000020377	Noc4l	96	36.346	Jaculus_jaculus
ENSCING00000011753	-	98	36.782	ENSKMAG00000012718	noc4l	98	36.782	Kryptolebias_marmoratus
ENSCING00000011753	-	98	35.728	ENSLBEG00000002825	noc4l	98	35.728	Labrus_bergylta
ENSCING00000011753	-	98	36.762	ENSLACG00000018559	NOC4L	97	36.750	Latimeria_chalumnae
ENSCING00000011753	-	95	38.000	ENSLOCG00000006060	noc4l	92	39.490	Lepisosteus_oculatus
ENSCING00000011753	-	96	36.166	ENSLAFG00000027295	NOC4L	98	35.328	Loxodonta_africana
ENSCING00000011753	-	98	35.853	ENSMFAG00000046313	NOC4L	97	35.659	Macaca_fascicularis
ENSCING00000011753	-	98	35.659	ENSMMUG00000006735	NOC4L	97	35.465	Macaca_mulatta
ENSCING00000011753	-	98	35.853	ENSMNEG00000043745	NOC4L	97	35.659	Macaca_nemestrina
ENSCING00000011753	-	89	37.131	ENSMLEG00000032574	NOC4L	97	36.920	Mandrillus_leucophaeus
ENSCING00000011753	-	98	36.604	ENSMAMG00000007207	noc4l	98	36.604	Mastacembelus_armatus
ENSCING00000011753	-	97	36.994	ENSMZEG00005017749	noc4l	95	36.994	Maylandia_zebra
ENSCING00000011753	-	66	38.551	ENSMGAG00000001901	NOC4L	92	38.551	Meleagris_gallopavo
ENSCING00000011753	-	99	35.932	ENSMAUG00000018153	Noc4l	99	35.932	Mesocricetus_auratus
ENSCING00000011753	-	96	36.095	ENSMICG00000011789	NOC4L	92	36.095	Microcebus_murinus
ENSCING00000011753	-	98	34.848	ENSMOCG00000015072	-	98	34.848	Microtus_ochrogaster
ENSCING00000011753	-	91	35.685	ENSMOCG00000022696	-	93	35.685	Microtus_ochrogaster
ENSCING00000011753	-	89	36.722	ENSMODG00000015342	NOC4L	97	36.722	Monodelphis_domestica
ENSCING00000011753	-	98	37.665	ENSMALG00000013174	noc4l	97	37.665	Monopterus_albus
ENSCING00000011753	-	98	34.808	MGP_CAROLIEiJ_G0027548	Noc4l	98	35.203	Mus_caroli
ENSCING00000011753	-	98	35.000	ENSMUSG00000033294	Noc4l	98	35.397	Mus_musculus
ENSCING00000011753	-	98	35.783	MGP_PahariEiJ_G0024130	Noc4l	98	35.783	Mus_pahari
ENSCING00000011753	-	98	35.385	MGP_SPRETEiJ_G0028546	Noc4l	98	35.783	Mus_spretus
ENSCING00000011753	-	83	36.117	ENSMPUG00000002415	NOC4L	96	36.117	Mustela_putorius_furo
ENSCING00000011753	-	96	34.442	ENSMLUG00000028195	NOC4L	96	34.442	Myotis_lucifugus
ENSCING00000011753	-	98	35.728	ENSNGAG00000002758	Noc4l	98	35.728	Nannospalax_galili
ENSCING00000011753	-	97	36.802	ENSNBRG00000020542	noc4l	95	36.802	Neolamprologus_brichardi
ENSCING00000011753	-	98	31.227	ENSNLEG00000008553	NOC4L	97	31.227	Nomascus_leucogenys
ENSCING00000011753	-	70	40.872	ENSMEUG00000004020	NOC4L	70	40.872	Notamacropus_eugenii
ENSCING00000011753	-	59	44.156	ENSOPRG00000012976	-	98	44.156	Ochotona_princeps
ENSCING00000011753	-	97	35.340	ENSODEG00000007796	NOC4L	99	35.340	Octodon_degus
ENSCING00000011753	-	97	36.944	ENSONIG00000003800	noc4l	95	36.944	Oreochromis_niloticus
ENSCING00000011753	-	82	37.327	ENSOANG00000007306	NOC4L	98	37.327	Ornithorhynchus_anatinus
ENSCING00000011753	-	97	35.115	ENSORLG00000010804	noc4l	95	35.115	Oryzias_latipes
ENSCING00000011753	-	97	35.496	ENSORLG00020000286	noc4l	95	35.496	Oryzias_latipes_hni
ENSCING00000011753	-	97	32.890	ENSORLG00015023020	noc4l	94	32.890	Oryzias_latipes_hsok
ENSCING00000011753	-	97	35.534	ENSOMEG00000022646	noc4l	95	35.534	Oryzias_melastigma
ENSCING00000011753	-	96	36.811	ENSOGAG00000001727	NOC4L	95	36.811	Otolemur_garnettii
ENSCING00000011753	-	97	36.791	ENSOARG00000011688	NOC4L	92	36.791	Ovis_aries
ENSCING00000011753	-	96	35.756	ENSPPAG00000042504	NOC4L	98	36.183	Pan_paniscus
ENSCING00000011753	-	97	36.133	ENSPPRG00000014742	NOC4L	97	36.133	Panthera_pardus
ENSCING00000011753	-	98	35.465	ENSPTRG00000050596	NOC4L	97	35.465	Pan_troglodytes
ENSCING00000011753	-	98	36.047	ENSPANG00000011004	NOC4L	97	35.853	Papio_anubis
ENSCING00000011753	-	97	36.660	ENSPKIG00000017628	noc4l	96	36.660	Paramormyrops_kingsleyae
ENSCING00000011753	-	81	37.589	ENSPSIG00000007614	NOC4L	97	37.589	Pelodiscus_sinensis
ENSCING00000011753	-	98	35.361	ENSPMGG00000004587	noc4l	97	35.361	Periophthalmus_magnuspinnatus
ENSCING00000011753	-	99	35.373	ENSPEMG00000011021	Noc4l	99	35.373	Peromyscus_maniculatus_bairdii
ENSCING00000011753	-	98	33.973	ENSPCIG00000004756	NOC4L	98	33.397	Phascolarctos_cinereus
ENSCING00000011753	-	98	37.165	ENSPFOG00000019666	noc4l	97	37.165	Poecilia_formosa
ENSCING00000011753	-	85	37.826	ENSPLAG00000002727	-	92	37.826	Poecilia_latipinna
ENSCING00000011753	-	98	37.165	ENSPLAG00000007196	noc4l	97	37.165	Poecilia_latipinna
ENSCING00000011753	-	98	37.165	ENSPMEG00000006050	noc4l	97	37.165	Poecilia_mexicana
ENSCING00000011753	-	55	38.014	ENSPMEG00000011164	-	94	38.014	Poecilia_mexicana
ENSCING00000011753	-	97	37.016	ENSPREG00000007187	noc4l	96	37.016	Poecilia_reticulata
ENSCING00000011753	-	86	31.696	ENSPPYG00000005136	-	89	31.250	Pongo_abelii
ENSCING00000011753	-	94	33.065	ENSPCAG00000009845	NOC4L	94	33.065	Procavia_capensis
ENSCING00000011753	-	96	36.220	ENSPCOG00000020675	NOC4L	96	36.220	Propithecus_coquereli
ENSCING00000011753	-	66	36.919	ENSPVAG00000000458	NOC4L	65	36.919	Pteropus_vampyrus
ENSCING00000011753	-	97	37.066	ENSPNYG00000013588	noc4l	95	37.066	Pundamilia_nyererei
ENSCING00000011753	-	95	36.653	ENSPNAG00000025632	noc4l	93	36.653	Pygocentrus_nattereri
ENSCING00000011753	-	98	35.010	ENSRNOG00000037478	Noc4l	98	35.010	Rattus_norvegicus
ENSCING00000011753	-	96	35.686	ENSRBIG00000037584	NOC4L	96	35.490	Rhinopithecus_bieti
ENSCING00000011753	-	96	35.490	ENSRROG00000033324	NOC4L	96	35.294	Rhinopithecus_roxellana
ENSCING00000011753	-	86	36.484	ENSSBOG00000031768	NOC4L	96	36.147	Saimiri_boliviensis_boliviensis
ENSCING00000011753	-	90	36.998	ENSSHAG00000011598	NOC4L	96	36.998	Sarcophilus_harrisii
ENSCING00000011753	-	90	36.382	ENSSFOG00015000842	noc4l	88	36.527	Scleropages_formosus
ENSCING00000011753	-	97	37.143	ENSSMAG00000019065	noc4l	97	37.143	Scophthalmus_maximus
ENSCING00000011753	-	98	37.925	ENSSDUG00000007110	noc4l	98	37.925	Seriola_dumerili
ENSCING00000011753	-	98	37.925	ENSSLDG00000022859	noc4l	98	37.925	Seriola_lalandi_dorsalis
ENSCING00000011753	-	95	35.259	ENSSPUG00000009730	NOC4L	96	35.167	Sphenodon_punctatus
ENSCING00000011753	-	98	37.311	ENSSPAG00000006316	noc4l	98	37.311	Stegastes_partitus
ENSCING00000011753	-	96	35.261	ENSSSCG00000009739	NOC4L	96	39.080	Sus_scrofa
ENSCING00000011753	-	96	33.792	ENSTGUG00000008115	-	98	33.792	Taeniopygia_guttata
ENSCING00000011753	-	93	34.211	ENSTNIG00000003941	noc4l	87	36.344	Tetraodon_nigroviridis
ENSCING00000011753	-	78	38.411	ENSTTRG00000000638	NOC4L	78	38.411	Tursiops_truncatus
ENSCING00000011753	-	97	35.742	ENSUAMG00000001296	NOC4L	97	35.742	Ursus_americanus
ENSCING00000011753	-	85	37.753	ENSUMAG00000002643	NOC4L	86	37.753	Ursus_maritimus
ENSCING00000011753	-	83	38.864	ENSVVUG00000004449	NOC4L	97	38.679	Vulpes_vulpes
ENSCING00000011753	-	97	37.670	ENSXETG00000002043	noc4l	94	37.992	Xenopus_tropicalis
ENSCING00000011753	-	95	37.945	ENSXCOG00000004716	noc4l	94	37.945	Xiphophorus_couchianus
ENSCING00000011753	-	95	37.945	ENSXMAG00000000964	noc4l	94	37.945	Xiphophorus_maculatus