EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain-containing protein 1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3244 bases
Position: chrHT001067.1:597-3840
Accession: 100187123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000022396	Ribosomal_L1	PF00687.21	1.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022642	-	863	XM_002122989	ENSCINP00000022396	225 (aa)	XP_002123025	F6S014

Gene Model

Click here to download ENSCING00000011810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011810	-	100	36.681	ENSG00000171490	RSL1D1	100	44.000	Homo_sapiens
ENSCING00000011810	-	100	33.333	ENSAPOG00000004544	rsl1d1	61	33.333	Acanthochromis_polyacanthus
ENSCING00000011810	-	100	33.480	ENSACIG00000006608	rsl1d1	69	33.480	Amphilophus_citrinellus
ENSCING00000011810	-	100	34.211	ENSAOCG00000001548	rsl1d1	62	34.211	Amphiprion_ocellaris
ENSCING00000011810	-	100	34.211	ENSAPEG00000003334	rsl1d1	62	34.211	Amphiprion_percula
ENSCING00000011810	-	100	32.895	ENSATEG00000009247	rsl1d1	61	32.895	Anabas_testudineus
ENSCING00000011810	-	100	37.281	ENSAPLG00000004451	RSL1D1	51	37.281	Anas_platyrhynchos
ENSCING00000011810	-	100	34.498	ENSANAG00000028185	-	53	34.498	Aotus_nancymaae
ENSCING00000011810	-	100	34.211	ENSACLG00000017535	rsl1d1	63	34.211	Astatotilapia_calliptera
ENSCING00000011810	-	100	31.278	ENSAMXG00000008624	rsl1d1	61	31.278	Astyanax_mexicanus
ENSCING00000011810	-	100	31.878	ENSCHIG00000009867	-	53	31.878	Capra_hircus
ENSCING00000011810	-	100	35.371	ENSCATG00000031153	RSL1D1	53	35.371	Cercocebus_atys
ENSCING00000011810	-	100	33.772	ENSCPBG00000004564	RSL1D1	88	33.166	Chrysemys_picta_bellii
ENSCING00000011810	-	99	54.222	ENSCSAVG00000011797	-	67	54.222	Ciona_savignyi
ENSCING00000011810	-	100	32.599	ENSCGRG00001014989	Rsl1d1	51	32.599	Cricetulus_griseus_chok1gshd
ENSCING00000011810	-	100	32.599	ENSCGRG00000001905	Rsl1d1	51	32.599	Cricetulus_griseus_crigri
ENSCING00000011810	-	100	33.333	ENSCSEG00000019693	rsl1d1	62	33.333	Cynoglossus_semilaevis
ENSCING00000011810	-	100	36.404	ENSCVAG00000000672	rsl1d1	64	36.404	Cyprinodon_variegatus
ENSCING00000011810	-	100	33.333	ENSDARG00000055868	rsl1d1	61	33.333	Danio_rerio
ENSCING00000011810	-	99	34.081	ENSEBUG00000005400	-	53	34.081	Eptatretus_burgeri
ENSCING00000011810	-	100	35.526	ENSELUG00000019243	rsl1d1	77	31.140	Esox_lucius
ENSCING00000011810	-	100	35.371	ENSFDAG00000011414	RSL1D1	51	35.371	Fukomys_damarensis
ENSCING00000011810	-	100	32.456	ENSFHEG00000017235	rsl1d1	63	32.456	Fundulus_heteroclitus
ENSCING00000011810	-	100	32.159	ENSGMOG00000013048	rsl1d1	80	32.159	Gadus_morhua
ENSCING00000011810	-	100	35.526	ENSGALG00000033690	RSL1D1	51	35.526	Gallus_gallus
ENSCING00000011810	-	100	34.649	ENSGAFG00000020794	rsl1d1	61	34.649	Gambusia_affinis
ENSCING00000011810	-	100	31.140	ENSGACG00000004483	rsl1d1	66	31.140	Gasterosteus_aculeatus
ENSCING00000011810	-	100	33.772	ENSHBUG00000001551	rsl1d1	63	33.772	Haplochromis_burtoni
ENSCING00000011810	-	100	34.934	ENSHGLG00000006774	RSL1D1	51	34.934	Heterocephalus_glaber_female
ENSCING00000011810	-	100	34.934	ENSHGLG00100017781	RSL1D1	51	34.934	Heterocephalus_glaber_male
ENSCING00000011810	-	99	30.222	ENSHCOG00000015208	rsl1d1	63	30.222	Hippocampus_comes
ENSCING00000011810	-	100	32.159	ENSIPUG00000001677	rsl1d1	60	32.159	Ictalurus_punctatus
ENSCING00000011810	-	100	32.895	ENSKMAG00000021908	rsl1d1	63	32.895	Kryptolebias_marmoratus
ENSCING00000011810	-	100	33.333	ENSLBEG00000001076	rsl1d1	65	33.333	Labrus_bergylta
ENSCING00000011810	-	100	32.895	ENSLOCG00000007416	rsl1d1	54	32.895	Lepisosteus_oculatus
ENSCING00000011810	-	100	35.808	ENSMMUG00000019632	RSL1D1	98	41.401	Macaca_mulatta
ENSCING00000011810	-	100	31.579	ENSMAMG00000004385	rsl1d1	62	31.579	Mastacembelus_armatus
ENSCING00000011810	-	100	34.211	ENSMZEG00005007150	rsl1d1	63	34.211	Maylandia_zebra
ENSCING00000011810	-	100	35.088	ENSMGAG00000000863	RSL1D1	52	35.088	Meleagris_gallopavo
ENSCING00000011810	-	100	33.772	ENSMOCG00000017724	Rsl1d1	52	33.772	Microtus_ochrogaster
ENSCING00000011810	-	100	32.018	ENSMMOG00000003730	rsl1d1	75	32.018	Mola_mola
ENSCING00000011810	-	100	31.004	ENSMODG00000029494	-	52	31.004	Monodelphis_domestica
ENSCING00000011810	-	100	35.217	ENSMODG00000004625	-	50	35.217	Monodelphis_domestica
ENSCING00000011810	-	100	33.772	ENSMALG00000009531	rsl1d1	61	33.772	Monopterus_albus
ENSCING00000011810	-	100	32.895	ENSMUSG00000005846	Rsl1d1	50	32.895	Mus_musculus
ENSCING00000011810	-	100	32.895	MGP_SPRETEiJ_G0021352	Rsl1d1	50	32.895	Mus_spretus
ENSCING00000011810	-	100	32.895	ENSNGAG00000013578	-	50	32.895	Nannospalax_galili
ENSCING00000011810	-	100	33.772	ENSNBRG00000002777	rsl1d1	62	33.772	Neolamprologus_brichardi
ENSCING00000011810	-	100	35.808	ENSNLEG00000012149	-	60	35.808	Nomascus_leucogenys
ENSCING00000011810	-	100	32.018	ENSOPRG00000004442	-	50	32.018	Ochotona_princeps
ENSCING00000011810	-	100	32.456	ENSONIG00000019757	rsl1d1	64	32.456	Oreochromis_niloticus
ENSCING00000011810	-	100	31.556	ENSOANG00000009408	-	54	31.556	Ornithorhynchus_anatinus
ENSCING00000011810	-	100	32.456	ENSORLG00000002877	rsl1d1	65	32.456	Oryzias_latipes
ENSCING00000011810	-	100	32.456	ENSORLG00020006636	rsl1d1	65	32.456	Oryzias_latipes_hni
ENSCING00000011810	-	100	32.895	ENSORLG00015005427	rsl1d1	65	32.895	Oryzias_latipes_hsok
ENSCING00000011810	-	100	33.333	ENSOMEG00000008036	rsl1d1	62	33.333	Oryzias_melastigma
ENSCING00000011810	-	99	33.040	ENSPKIG00000022687	rsl1d1	60	33.040	Paramormyrops_kingsleyae
ENSCING00000011810	-	100	32.456	ENSPSIG00000011642	RSL1D1	50	32.456	Pelodiscus_sinensis
ENSCING00000011810	-	100	33.040	ENSPMGG00000022261	rsl1d1	78	32.895	Periophthalmus_magnuspinnatus
ENSCING00000011810	-	88	32.161	ENSPEMG00000009523	Rsl1d1	50	32.895	Peromyscus_maniculatus_bairdii
ENSCING00000011810	-	100	34.934	ENSPCIG00000026851	-	57	34.934	Phascolarctos_cinereus
ENSCING00000011810	-	100	35.965	ENSPFOG00000005017	rsl1d1	63	35.965	Poecilia_formosa
ENSCING00000011810	-	100	35.965	ENSPLAG00000000482	rsl1d1	56	35.965	Poecilia_latipinna
ENSCING00000011810	-	100	35.526	ENSPMEG00000007032	rsl1d1	62	35.526	Poecilia_mexicana
ENSCING00000011810	-	100	34.211	ENSPREG00000016619	rsl1d1	59	34.211	Poecilia_reticulata
ENSCING00000011810	-	100	32.174	ENSPPYG00000019335	-	51	32.174	Pongo_abelii
ENSCING00000011810	-	100	33.624	ENSPCOG00000022456	RSL1D1	56	33.624	Propithecus_coquereli
ENSCING00000011810	-	100	34.211	ENSPNYG00000002850	rsl1d1	62	34.211	Pundamilia_nyererei
ENSCING00000011810	-	100	33.921	ENSPNAG00000011848	rsl1d1	61	33.921	Pygocentrus_nattereri
ENSCING00000011810	-	100	35.088	ENSSFOG00015011354	rsl1d1	65	35.088	Scleropages_formosus
ENSCING00000011810	-	100	32.018	ENSSMAG00000007957	rsl1d1	65	32.018	Scophthalmus_maximus
ENSCING00000011810	-	100	31.579	ENSSDUG00000008447	rsl1d1	58	31.579	Seriola_dumerili
ENSCING00000011810	-	100	32.895	ENSSLDG00000008293	rsl1d1	63	32.895	Seriola_lalandi_dorsalis
ENSCING00000011810	-	100	35.088	ENSSPUG00000007525	RSL1D1	50	35.088	Sphenodon_punctatus
ENSCING00000011810	-	100	35.088	ENSSPAG00000009755	rsl1d1	61	35.088	Stegastes_partitus
ENSCING00000011810	-	100	34.649	ENSTGUG00000005174	RSL1D1	92	34.649	Taeniopygia_guttata
ENSCING00000011810	-	100	32.609	ENSTRUG00000016970	rsl1d1	65	32.609	Takifugu_rubripes
ENSCING00000011810	-	100	31.304	ENSTNIG00000012925	rsl1d1	64	31.304	Tetraodon_nigroviridis
ENSCING00000011810	-	100	34.649	ENSUAMG00000004470	RSL1D1	50	34.171	Ursus_americanus
ENSCING00000011810	-	100	33.772	ENSXETG00000033365	-	51	33.772	Xenopus_tropicalis
ENSCING00000011810	-	63	38.889	ENSXCOG00000003117	rsl1d1	62	38.889	Xiphophorus_couchianus
ENSCING00000011810	-	100	35.526	ENSXMAG00000025111	rsl1d1	65	35.526	Xiphophorus_maculatus