EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000011960 (Gene tree)
Gene ID: 100184797
Gene Symbol: -
Alias: -
Full Name: elongation factor G%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 19573 bases
Position: chr7:2164837-2184409
Accession: 100184797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000022593	GTP_EFTU	PF00009.27	1e-63	1	1
ENSCINP00000022593	GTP_EFTU_D2	PF03144.25	1.4e-09	1	1
ENSCINP00000022593	EFG_IV	PF03764.18	6.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022839	-	2656	XM_002128301	ENSCINP00000022593	768 (aa)	XP_002128337	F6UKC4

Gene Model

Click here to download ENSCING00000011960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000011960	-	94	59.254	ENSG00000168827	GFM1	100	81.667	Homo_sapiens
ENSCING00000011960	-	88	58.284	ENSAPOG00000016489	gfm1	96	58.284	Acanthochromis_polyacanthus
ENSCING00000011960	-	97	58.199	ENSAMEG00000013542	GFM1	97	58.199	Ailuropoda_melanoleuca
ENSCING00000011960	-	93	54.812	ENSACIG00000014465	gfm1	92	54.812	Amphilophus_citrinellus
ENSCING00000011960	-	93	58.881	ENSAOCG00000006023	gfm1	94	58.881	Amphiprion_ocellaris
ENSCING00000011960	-	93	58.881	ENSAPEG00000024499	gfm1	97	58.601	Amphiprion_percula
ENSCING00000011960	-	93	58.462	ENSATEG00000013789	gfm1	94	58.462	Anabas_testudineus
ENSCING00000011960	-	93	57.880	ENSAPLG00000005022	GFM1	97	57.880	Anas_platyrhynchos
ENSCING00000011960	-	95	56.376	ENSACAG00000006829	GFM1	99	56.376	Anolis_carolinensis
ENSCING00000011960	-	95	59.290	ENSANAG00000035983	GFM1	95	59.290	Aotus_nancymaae
ENSCING00000011960	-	92	60.000	ENSACLG00000016586	gfm1	96	59.244	Astatotilapia_calliptera
ENSCING00000011960	-	97	56.469	ENSAMXG00000013435	gfm1	98	56.469	Astyanax_mexicanus
ENSCING00000011960	-	94	59.336	ENSBTAG00000027795	GFM1	95	59.336	Bos_taurus
ENSCING00000011960	-	90	52.594	WBGene00009246	gfm-1	95	51.393	Caenorhabditis_elegans
ENSCING00000011960	-	94	59.254	ENSCJAG00000000363	GFM1	95	59.254	Callithrix_jacchus
ENSCING00000011960	-	94	59.724	ENSCAFG00000009006	GFM1	99	59.765	Canis_familiaris
ENSCING00000011960	-	95	58.999	ENSCAFG00020005878	GFM1	98	59.724	Canis_lupus_dingo
ENSCING00000011960	-	98	57.881	ENSCHIG00000015220	GFM1	97	57.881	Capra_hircus
ENSCING00000011960	-	94	59.116	ENSTSYG00000002013	GFM1	95	59.116	Carlito_syrichta
ENSCING00000011960	-	95	51.096	ENSCAPG00000005699	GFM1	96	51.307	Cavia_aperea
ENSCING00000011960	-	94	59.392	ENSCPOG00000001194	GFM1	95	59.392	Cavia_porcellus
ENSCING00000011960	-	94	59.116	ENSCCAG00000025561	GFM1	95	59.116	Cebus_capucinus
ENSCING00000011960	-	96	58.639	ENSCATG00000037622	GFM1	96	58.639	Cercocebus_atys
ENSCING00000011960	-	94	59.116	ENSCLAG00000002503	GFM1	94	59.116	Chinchilla_lanigera
ENSCING00000011960	-	96	58.832	ENSCSAG00000012162	GFM1	95	58.832	Chlorocebus_sabaeus
ENSCING00000011960	-	98	51.995	ENSCHOG00000004867	GFM1	98	51.995	Choloepus_hoffmanni
ENSCING00000011960	-	93	59.972	ENSCPBG00000018367	GFM1	94	59.972	Chrysemys_picta_bellii
ENSCING00000011960	-	95	84.952	ENSCSAVG00000008514	-	99	84.952	Ciona_savignyi
ENSCING00000011960	-	96	58.832	ENSCANG00000031714	GFM1	95	58.832	Colobus_angolensis_palliatus
ENSCING00000011960	-	96	58.839	ENSCGRG00001022095	GFM1	97	58.839	Cricetulus_griseus_chok1gshd
ENSCING00000011960	-	96	58.839	ENSCGRG00000012043	GFM1	97	58.839	Cricetulus_griseus_crigri
ENSCING00000011960	-	93	55.524	ENSCSEG00000017088	gfm1	96	55.524	Cynoglossus_semilaevis
ENSCING00000011960	-	93	59.161	ENSCVAG00000004126	gfm1	98	57.762	Cyprinodon_variegatus
ENSCING00000011960	-	94	57.698	ENSDARG00000063624	gfm1	95	57.698	Danio_rerio
ENSCING00000011960	-	53	56.897	ENSDNOG00000016385	-	99	56.897	Dasypus_novemcinctus
ENSCING00000011960	-	94	58.425	ENSDORG00000014165	Gfm1	95	58.425	Dipodomys_ordii
ENSCING00000011960	-	96	56.644	FBgn0263133	mEFG1	99	56.644	Drosophila_melanogaster
ENSCING00000011960	-	94	54.897	ENSETEG00000019197	GFM1	95	54.897	Echinops_telfairi
ENSCING00000011960	-	89	54.386	ENSEBUG00000012794	gfm1	99	54.386	Eptatretus_burgeri
ENSCING00000011960	-	87	46.377	ENSEEUG00000000429	GFM1	92	46.377	Erinaceus_europaeus
ENSCING00000011960	-	93	57.821	ENSELUG00000014728	gfm1	94	57.821	Esox_lucius
ENSCING00000011960	-	94	59.751	ENSFCAG00000013291	GFM1	95	59.751	Felis_catus
ENSCING00000011960	-	88	57.879	ENSFALG00000007619	GFM1	99	57.879	Ficedula_albicollis
ENSCING00000011960	-	94	59.392	ENSFDAG00000016559	GFM1	95	59.392	Fukomys_damarensis
ENSCING00000011960	-	93	59.021	ENSFHEG00000006091	gfm1	94	59.021	Fundulus_heteroclitus
ENSCING00000011960	-	93	58.042	ENSGMOG00000010161	gfm1	97	58.042	Gadus_morhua
ENSCING00000011960	-	96	56.369	ENSGALG00000009634	GFM1	99	56.369	Gallus_gallus
ENSCING00000011960	-	93	58.741	ENSGAFG00000012527	gfm1	94	58.741	Gambusia_affinis
ENSCING00000011960	-	93	59.135	ENSGACG00000009864	gfm1	98	56.274	Gasterosteus_aculeatus
ENSCING00000011960	-	94	59.254	ENSGGOG00000003085	GFM1	95	59.254	Gorilla_gorilla
ENSCING00000011960	-	92	60.000	ENSHBUG00000002120	gfm1	94	60.000	Haplochromis_burtoni
ENSCING00000011960	-	94	59.945	ENSHGLG00000016855	GFM1	95	59.945	Heterocephalus_glaber_female
ENSCING00000011960	-	94	59.945	ENSHGLG00100013049	GFM1	95	59.945	Heterocephalus_glaber_male
ENSCING00000011960	-	96	57.531	ENSHCOG00000007638	gfm1	95	59.601	Hippocampus_comes
ENSCING00000011960	-	93	57.961	ENSIPUG00000005873	gfm1	94	57.961	Ictalurus_punctatus
ENSCING00000011960	-	96	58.943	ENSSTOG00000010150	GFM1	98	58.943	Ictidomys_tridecemlineatus
ENSCING00000011960	-	99	57.763	ENSJJAG00000016447	Gfm1	99	57.763	Jaculus_jaculus
ENSCING00000011960	-	93	58.659	ENSKMAG00000020768	gfm1	94	58.659	Kryptolebias_marmoratus
ENSCING00000011960	-	92	58.097	ENSLBEG00000021315	gfm1	99	58.097	Labrus_bergylta
ENSCING00000011960	-	96	56.528	ENSLACG00000012295	GFM1	98	56.528	Latimeria_chalumnae
ENSCING00000011960	-	93	55.139	ENSLOCG00000003778	gfm1	97	55.139	Lepisosteus_oculatus
ENSCING00000011960	-	94	58.978	ENSLAFG00000010945	GFM1	98	57.597	Loxodonta_africana
ENSCING00000011960	-	96	58.832	ENSMFAG00000035731	GFM1	95	58.832	Macaca_fascicularis
ENSCING00000011960	-	96	58.832	ENSMMUG00000004961	GFM1	95	58.832	Macaca_mulatta
ENSCING00000011960	-	96	58.560	ENSMNEG00000033245	GFM1	95	58.560	Macaca_nemestrina
ENSCING00000011960	-	97	57.392	ENSMLEG00000030908	GFM1	99	57.392	Mandrillus_leucophaeus
ENSCING00000011960	-	93	60.000	ENSMAMG00000011760	gfm1	94	60.000	Mastacembelus_armatus
ENSCING00000011960	-	92	60.000	ENSMZEG00005016639	gfm1	94	60.000	Maylandia_zebra
ENSCING00000011960	-	93	57.961	ENSMGAG00000010641	GFM1	95	57.961	Meleagris_gallopavo
ENSCING00000011960	-	94	59.751	ENSMAUG00000000611	Gfm1	95	59.751	Mesocricetus_auratus
ENSCING00000011960	-	93	60.251	ENSMICG00000049086	GFM1	94	60.251	Microcebus_murinus
ENSCING00000011960	-	99	57.368	ENSMOCG00000000465	Gfm1	99	57.368	Microtus_ochrogaster
ENSCING00000011960	-	92	59.155	ENSMMOG00000012538	gfm1	95	59.155	Mola_mola
ENSCING00000011960	-	93	60.894	ENSMODG00000015673	GFM1	95	60.894	Monodelphis_domestica
ENSCING00000011960	-	93	59.161	ENSMALG00000012508	gfm1	94	59.161	Monopterus_albus
ENSCING00000011960	-	94	59.059	MGP_CAROLIEiJ_G0025052	Gfm1	95	59.059	Mus_caroli
ENSCING00000011960	-	94	59.336	ENSMUSG00000027774	Gfm1	95	59.336	Mus_musculus
ENSCING00000011960	-	94	59.474	MGP_PahariEiJ_G0026495	Gfm1	95	59.474	Mus_pahari
ENSCING00000011960	-	94	59.336	MGP_SPRETEiJ_G0025994	Gfm1	95	59.336	Mus_spretus
ENSCING00000011960	-	94	60.304	ENSMPUG00000002859	GFM1	95	60.304	Mustela_putorius_furo
ENSCING00000011960	-	94	59.669	ENSMLUG00000000452	GFM1	95	59.669	Myotis_lucifugus
ENSCING00000011960	-	96	57.938	ENSNGAG00000012375	Gfm1	96	57.938	Nannospalax_galili
ENSCING00000011960	-	92	59.718	ENSNBRG00000004631	gfm1	96	59.718	Neolamprologus_brichardi
ENSCING00000011960	-	94	59.392	ENSNLEG00000004176	GFM1	95	59.392	Nomascus_leucogenys
ENSCING00000011960	-	89	54.332	ENSMEUG00000007784	GFM1	98	54.332	Notamacropus_eugenii
ENSCING00000011960	-	96	57.551	ENSOPRG00000009860	GFM1	97	57.551	Ochotona_princeps
ENSCING00000011960	-	93	59.972	ENSODEG00000004316	GFM1	94	59.972	Octodon_degus
ENSCING00000011960	-	92	60.000	ENSONIG00000003772	gfm1	94	60.000	Oreochromis_niloticus
ENSCING00000011960	-	94	59.254	ENSOCUG00000013561	GFM1	95	59.254	Oryctolagus_cuniculus
ENSCING00000011960	-	92	59.551	ENSORLG00000006487	gfm1	99	59.551	Oryzias_latipes
ENSCING00000011960	-	93	59.414	ENSORLG00020003362	gfm1	94	59.414	Oryzias_latipes_hni
ENSCING00000011960	-	93	59.275	ENSORLG00015005829	gfm1	94	59.275	Oryzias_latipes_hsok
ENSCING00000011960	-	93	59.301	ENSOMEG00000012894	gfm1	95	58.322	Oryzias_melastigma
ENSCING00000011960	-	95	58.735	ENSOGAG00000008298	GFM1	95	58.735	Otolemur_garnettii
ENSCING00000011960	-	94	58.953	ENSOARG00000002409	GFM1	98	58.953	Ovis_aries
ENSCING00000011960	-	94	59.254	ENSPPAG00000033881	GFM1	95	59.254	Pan_paniscus
ENSCING00000011960	-	94	59.751	ENSPPRG00000009281	GFM1	95	59.751	Panthera_pardus
ENSCING00000011960	-	94	59.751	ENSPTIG00000012416	GFM1	95	59.751	Panthera_tigris_altaica
ENSCING00000011960	-	94	59.254	ENSPTRG00000015570	GFM1	95	59.254	Pan_troglodytes
ENSCING00000011960	-	96	58.832	ENSPANG00000016512	GFM1	95	58.832	Papio_anubis
ENSCING00000011960	-	96	57.531	ENSPKIG00000004876	gfm1	97	57.531	Paramormyrops_kingsleyae
ENSCING00000011960	-	95	58.503	ENSPSIG00000012567	GFM1	97	58.503	Pelodiscus_sinensis
ENSCING00000011960	-	92	58.650	ENSPMGG00000014068	gfm1	97	58.650	Periophthalmus_magnuspinnatus
ENSCING00000011960	-	94	59.945	ENSPEMG00000008942	Gfm1	95	59.945	Peromyscus_maniculatus_bairdii
ENSCING00000011960	-	79	60.891	ENSPCIG00000020195	GFM1	93	60.891	Phascolarctos_cinereus
ENSCING00000011960	-	93	59.161	ENSPFOG00000011022	gfm1	94	59.161	Poecilia_formosa
ENSCING00000011960	-	93	59.021	ENSPLAG00000019585	gfm1	95	58.772	Poecilia_latipinna
ENSCING00000011960	-	93	59.021	ENSPMEG00000012376	gfm1	94	59.021	Poecilia_mexicana
ENSCING00000011960	-	93	58.601	ENSPREG00000001332	gfm1	89	58.601	Poecilia_reticulata
ENSCING00000011960	-	94	59.254	ENSPPYG00000014244	GFM1	95	59.254	Pongo_abelii
ENSCING00000011960	-	92	59.065	ENSPCAG00000008934	GFM1	99	59.065	Procavia_capensis
ENSCING00000011960	-	95	59.285	ENSPCOG00000022259	GFM1	95	59.285	Propithecus_coquereli
ENSCING00000011960	-	94	59.116	ENSPVAG00000013605	GFM1	95	59.116	Pteropus_vampyrus
ENSCING00000011960	-	92	59.859	ENSPNYG00000006037	gfm1	95	59.859	Pundamilia_nyererei
ENSCING00000011960	-	95	58.047	ENSPNAG00000001237	gfm1	96	58.047	Pygocentrus_nattereri
ENSCING00000011960	-	94	59.198	ENSRNOG00000012873	Gfm1	95	59.198	Rattus_norvegicus
ENSCING00000011960	-	96	58.696	ENSRBIG00000031363	GFM1	95	58.696	Rhinopithecus_bieti
ENSCING00000011960	-	96	58.832	ENSRROG00000031081	GFM1	95	58.832	Rhinopithecus_roxellana
ENSCING00000011960	-	92	52.448	YLR069C	-	92	52.448	Saccharomyces_cerevisiae
ENSCING00000011960	-	94	59.254	ENSSBOG00000023252	GFM1	95	59.254	Saimiri_boliviensis_boliviensis
ENSCING00000011960	-	95	59.375	ENSSHAG00000017772	GFM1	97	59.375	Sarcophilus_harrisii
ENSCING00000011960	-	95	57.745	ENSSFOG00015003117	gfm1	99	57.745	Scleropages_formosus
ENSCING00000011960	-	98	56.217	ENSSMAG00000013221	gfm1	99	56.217	Scophthalmus_maximus
ENSCING00000011960	-	93	59.021	ENSSDUG00000018665	gfm1	94	59.021	Seriola_dumerili
ENSCING00000011960	-	93	59.021	ENSSLDG00000020606	gfm1	94	59.021	Seriola_lalandi_dorsalis
ENSCING00000011960	-	95	58.082	ENSSPUG00000018686	GFM1	97	58.082	Sphenodon_punctatus
ENSCING00000011960	-	93	58.881	ENSSPAG00000008800	gfm1	94	58.881	Stegastes_partitus
ENSCING00000011960	-	94	59.336	ENSSSCG00000025651	GFM1	94	59.336	Sus_scrofa
ENSCING00000011960	-	93	59.441	ENSTRUG00000009244	gfm1	94	59.441	Takifugu_rubripes
ENSCING00000011960	-	98	57.275	ENSTNIG00000007729	gfm1	99	57.275	Tetraodon_nigroviridis
ENSCING00000011960	-	88	54.934	ENSTBEG00000017404	GFM1	89	54.934	Tupaia_belangeri
ENSCING00000011960	-	96	58.345	ENSTTRG00000001735	GFM1	96	58.345	Tursiops_truncatus
ENSCING00000011960	-	94	59.751	ENSUAMG00000026381	GFM1	95	59.751	Ursus_americanus
ENSCING00000011960	-	94	59.751	ENSUMAG00000011268	GFM1	95	59.751	Ursus_maritimus
ENSCING00000011960	-	94	57.815	ENSVPAG00000009444	GFM1	95	57.815	Vicugna_pacos
ENSCING00000011960	-	94	59.448	ENSVVUG00000020091	GFM1	99	59.471	Vulpes_vulpes
ENSCING00000011960	-	94	59.474	ENSXETG00000032551	GFM1	95	59.474	Xenopus_tropicalis
ENSCING00000011960	-	51	58.505	ENSXCOG00000012590	gfm1	87	58.505	Xiphophorus_couchianus
ENSCING00000011960	-	93	58.462	ENSXMAG00000000261	gfm1	94	58.462	Xiphophorus_maculatus