EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012193 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1291 bases
Position: chr5:2996148-2997438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002072	RRP36	PF06102.12	1.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002072	-	759	-	ENSCINP00000002072	253 (aa)	-	F7AG76

Gene Model

Click here to download ENSCING00000012193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012193	-	97	35.200	ENSG00000124541	RRP36	81	38.426	Homo_sapiens
ENSCING00000012193	-	70	43.503	ENSAPOG00000022015	rrp36	64	39.474	Acanthochromis_polyacanthus
ENSCING00000012193	-	80	39.604	ENSACIG00000020578	-	52	38.756	Amphilophus_citrinellus
ENSCING00000012193	-	70	44.633	ENSAOCG00000013439	rrp36	52	44.633	Amphiprion_ocellaris
ENSCING00000012193	-	70	44.633	ENSAPEG00000020996	rrp36	52	44.633	Amphiprion_percula
ENSCING00000012193	-	77	44.388	ENSATEG00000016946	rrp36	54	44.845	Anabas_testudineus
ENSCING00000012193	-	85	37.104	ENSANAG00000021773	RRP36	81	38.028	Aotus_nancymaae
ENSCING00000012193	-	70	30.682	ENSACLG00000013982	RRP36	59	36.029	Astatotilapia_calliptera
ENSCING00000012193	-	77	34.021	ENSACLG00000008408	rrp36	77	34.021	Astatotilapia_calliptera
ENSCING00000012193	-	97	37.849	ENSBTAG00000053873	RRP36	97	37.849	Bos_taurus
ENSCING00000012193	-	87	36.161	ENSCJAG00000004943	RRP36	83	37.037	Callithrix_jacchus
ENSCING00000012193	-	87	37.054	ENSCAFG00020011057	RRP36	92	37.273	Canis_lupus_dingo
ENSCING00000012193	-	79	40.000	ENSCHIG00000003210	-	89	40.000	Capra_hircus
ENSCING00000012193	-	85	38.914	ENSCHIG00000016354	-	85	38.914	Capra_hircus
ENSCING00000012193	-	57	42.759	ENSCHIG00000019781	-	68	42.759	Capra_hircus
ENSCING00000012193	-	73	39.572	ENSTSYG00000037176	RRP36	71	39.572	Carlito_syrichta
ENSCING00000012193	-	84	35.484	ENSCAPG00000010983	RRP36	91	36.406	Cavia_aperea
ENSCING00000012193	-	86	35.586	ENSCPOG00000025932	RRP36	96	36.486	Cavia_porcellus
ENSCING00000012193	-	87	37.054	ENSCCAG00000000048	RRP36	82	37.963	Cebus_capucinus
ENSCING00000012193	-	82	39.437	ENSCATG00000041903	RRP36	81	39.437	Cercocebus_atys
ENSCING00000012193	-	85	37.168	ENSCLAG00000013166	RRP36	98	37.168	Chinchilla_lanigera
ENSCING00000012193	-	87	37.946	ENSCSAG00000011553	RRP36	82	38.889	Chlorocebus_sabaeus
ENSCING00000012193	-	83	37.441	ENSCPBG00000003555	RRP36	53	37.441	Chrysemys_picta_bellii
ENSCING00000012193	-	86	57.143	ENSCSAVG00000002672	-	95	57.143	Ciona_savignyi
ENSCING00000012193	-	83	38.889	ENSCANG00000035127	RRP36	83	38.889	Colobus_angolensis_palliatus
ENSCING00000012193	-	85	37.788	ENSCGRG00001021461	Rrp36	99	36.522	Cricetulus_griseus_chok1gshd
ENSCING00000012193	-	85	37.788	ENSCGRG00000006286	Rrp36	99	36.522	Cricetulus_griseus_crigri
ENSCING00000012193	-	73	42.553	ENSCSEG00000001039	RRP36	67	40.435	Cynoglossus_semilaevis
ENSCING00000012193	-	70	34.463	ENSCVAG00000017798	rrp36	75	34.615	Cyprinodon_variegatus
ENSCING00000012193	-	80	40.976	ENSDARG00000032516	rrp36	63	40.187	Danio_rerio
ENSCING00000012193	-	84	35.185	ENSDORG00000012186	Rrp36	92	35.185	Dipodomys_ordii
ENSCING00000012193	-	68	31.282	FBgn0038235	CG8461	55	37.410	Drosophila_melanogaster
ENSCING00000012193	-	85	37.557	ENSEASG00005003169	RRP36	91	38.498	Equus_asinus_asinus
ENSCING00000012193	-	85	37.557	ENSECAG00000040238	RRP36	91	38.498	Equus_caballus
ENSCING00000012193	-	55	41.549	ENSEEUG00000010515	RRP36	55	41.549	Erinaceus_europaeus
ENSCING00000012193	-	84	40.465	ENSELUG00000016840	rrp36	59	40.465	Esox_lucius
ENSCING00000012193	-	85	37.273	ENSFCAG00000043818	RRP36	86	37.273	Felis_catus
ENSCING00000012193	-	70	41.111	ENSFDAG00000010380	RRP36	81	41.111	Fukomys_damarensis
ENSCING00000012193	-	53	42.857	ENSFHEG00000000761	rrp36	65	42.857	Fundulus_heteroclitus
ENSCING00000012193	-	70	41.243	ENSGACG00000019603	RRP36	68	35.683	Gasterosteus_aculeatus
ENSCING00000012193	-	97	35.200	ENSGGOG00000037384	RRP36	91	35.200	Gorilla_gorilla
ENSCING00000012193	-	77	36.869	ENSHBUG00000008974	RRP36	66	35.909	Haplochromis_burtoni
ENSCING00000012193	-	70	40.556	ENSHGLG00000018082	RRP36	69	40.556	Heterocephalus_glaber_female
ENSCING00000012193	-	70	40.556	ENSHGLG00100019303	RRP36	69	40.556	Heterocephalus_glaber_male
ENSCING00000012193	-	81	33.333	ENSIPUG00000016548	rrp36	75	33.906	Ictalurus_punctatus
ENSCING00000012193	-	84	37.838	ENSSTOG00000009511	RRP36	90	37.838	Ictidomys_tridecemlineatus
ENSCING00000012193	-	85	38.739	ENSJJAG00000023363	Rrp36	94	37.557	Jaculus_jaculus
ENSCING00000012193	-	83	38.967	ENSLACG00000001888	rrp36	76	36.948	Latimeria_chalumnae
ENSCING00000012193	-	83	37.037	ENSLAFG00000032704	RRP36	98	37.037	Loxodonta_africana
ENSCING00000012193	-	83	38.889	ENSMFAG00000003547	RRP36	82	38.889	Macaca_fascicularis
ENSCING00000012193	-	83	38.889	ENSMNEG00000044747	RRP36	82	38.889	Macaca_nemestrina
ENSCING00000012193	-	87	37.946	ENSMLEG00000034272	RRP36	82	38.889	Mandrillus_leucophaeus
ENSCING00000012193	-	75	41.451	ENSMAMG00000019157	-	52	40.796	Mastacembelus_armatus
ENSCING00000012193	-	79	36.946	ENSMZEG00005015204	RRP36	60	36.946	Maylandia_zebra
ENSCING00000012193	-	86	37.273	ENSMAUG00000003648	Rrp36	96	37.273	Mesocricetus_auratus
ENSCING00000012193	-	87	37.611	ENSMICG00000045230	RRP36	87	37.611	Microcebus_murinus
ENSCING00000012193	-	86	35.747	ENSMOCG00000002009	Rrp36	89	36.652	Microtus_ochrogaster
ENSCING00000012193	-	76	38.660	ENSMMOG00000018637	-	55	38.660	Mola_mola
ENSCING00000012193	-	54	37.857	ENSMODG00000029304	-	72	39.041	Monodelphis_domestica
ENSCING00000012193	-	77	41.538	ENSMALG00000008142	-	62	40.887	Monopterus_albus
ENSCING00000012193	-	85	35.780	MGP_CAROLIEiJ_G0021680	Rrp36	87	35.780	Mus_caroli
ENSCING00000012193	-	86	36.199	ENSMUSG00000023971	Rrp36	95	36.199	Mus_musculus
ENSCING00000012193	-	86	36.818	MGP_PahariEiJ_G0020671	Rrp36	95	36.818	Mus_pahari
ENSCING00000012193	-	85	36.697	MGP_SPRETEiJ_G0022592	Rrp36	87	36.697	Mus_spretus
ENSCING00000012193	-	83	37.963	ENSNLEG00000033289	RRP36	98	37.963	Nomascus_leucogenys
ENSCING00000012193	-	54	45.255	ENSOPRG00000002274	RRP36	54	45.255	Ochotona_princeps
ENSCING00000012193	-	89	33.617	ENSODEG00000015915	RRP36	99	34.199	Octodon_degus
ENSCING00000012193	-	76	36.979	ENSONIG00000015983	rrp36	71	34.348	Oreochromis_niloticus
ENSCING00000012193	-	82	37.441	ENSORLG00000029500	rrp36	50	42.614	Oryzias_latipes
ENSCING00000012193	-	70	38.889	ENSORLG00020017452	-	50	41.111	Oryzias_latipes_hni
ENSCING00000012193	-	82	37.089	ENSORLG00015016898	rrp36	50	42.135	Oryzias_latipes_hsok
ENSCING00000012193	-	82	39.151	ENSOMEG00000008623	RRP36	61	39.810	Oryzias_melastigma
ENSCING00000012193	-	87	36.283	ENSOGAG00000012699	RRP36	95	36.283	Otolemur_garnettii
ENSCING00000012193	-	83	30.093	ENSPPAG00000042831	-	88	30.303	Pan_paniscus
ENSCING00000012193	-	85	37.273	ENSPPRG00000014610	RRP36	86	37.273	Panthera_pardus
ENSCING00000012193	-	85	37.273	ENSPTIG00000010853	RRP36	86	37.273	Panthera_tigris_altaica
ENSCING00000012193	-	97	35.200	ENSPTRG00000018184	RRP36	88	35.200	Pan_troglodytes
ENSCING00000012193	-	83	38.889	ENSPANG00000025140	RRP36	82	38.889	Papio_anubis
ENSCING00000012193	-	83	41.038	ENSPKIG00000004303	rrp36	61	41.981	Paramormyrops_kingsleyae
ENSCING00000012193	-	64	36.196	ENSPMGG00000016870	rrp36	52	38.889	Periophthalmus_magnuspinnatus
ENSCING00000012193	-	85	36.866	ENSPEMG00000007015	Rrp36	93	36.866	Peromyscus_maniculatus_bairdii
ENSCING00000012193	-	72	36.757	ENSPCIG00000009179	RRP36	72	36.757	Phascolarctos_cinereus
ENSCING00000012193	-	70	39.548	ENSPLAG00000023901	rrp36	62	35.111	Poecilia_latipinna
ENSCING00000012193	-	89	36.797	ENSPPYG00000016628	RRP36	87	36.797	Pongo_abelii
ENSCING00000012193	-	74	39.362	ENSPCOG00000018401	RRP36	73	39.572	Propithecus_coquereli
ENSCING00000012193	-	73	39.037	ENSPVAG00000008714	RRP36	74	39.037	Pteropus_vampyrus
ENSCING00000012193	-	79	36.946	ENSPNYG00000018030	RRP36	61	36.946	Pundamilia_nyererei
ENSCING00000012193	-	75	41.451	ENSPNAG00000027207	rrp36	51	41.451	Pygocentrus_nattereri
ENSCING00000012193	-	85	37.156	ENSRNOG00000017836	Rrp36	87	37.156	Rattus_norvegicus
ENSCING00000012193	-	97	36.255	ENSRBIG00000040019	RRP36	82	38.889	Rhinopithecus_bieti
ENSCING00000012193	-	97	36.255	ENSRROG00000040721	RRP36	85	37.946	Rhinopithecus_roxellana
ENSCING00000012193	-	87	36.161	ENSSBOG00000030228	RRP36	84	37.037	Saimiri_boliviensis_boliviensis
ENSCING00000012193	-	83	41.315	ENSSFOG00015023058	rrp36	62	41.860	Scleropages_formosus
ENSCING00000012193	-	82	40.376	ENSSMAG00000020911	-	57	40.000	Scophthalmus_maximus
ENSCING00000012193	-	70	42.697	ENSSLDG00000019741	RRP36	80	42.697	Seriola_lalandi_dorsalis
ENSCING00000012193	-	84	37.037	ENSSARG00000000873	RRP36	99	37.037	Sorex_araneus
ENSCING00000012193	-	70	43.017	ENSSPAG00000017154	rrp36	65	39.631	Stegastes_partitus
ENSCING00000012193	-	87	37.500	ENSSSCG00000001656	RRP36	88	37.500	Sus_scrofa
ENSCING00000012193	-	76	31.122	ENSSSCG00000037862	-	81	31.122	Sus_scrofa
ENSCING00000012193	-	80	39.713	ENSTRUG00000021893	rrp36	61	39.713	Takifugu_rubripes
ENSCING00000012193	-	72	40.000	ENSTNIG00000004741	rrp36	69	41.573	Tetraodon_nigroviridis
ENSCING00000012193	-	84	34.247	ENSTTRG00000007001	RRP36	89	36.607	Tursiops_truncatus
ENSCING00000012193	-	87	36.607	ENSUAMG00000015865	RRP36	89	36.607	Ursus_americanus
ENSCING00000012193	-	65	39.521	ENSUMAG00000008726	RRP36	99	39.521	Ursus_maritimus
ENSCING00000012193	-	83	38.426	ENSVPAG00000008904	RRP36	98	38.426	Vicugna_pacos
ENSCING00000012193	-	87	37.054	ENSVVUG00000027816	RRP36	92	37.273	Vulpes_vulpes