EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012198 (Gene tree)
Gene ID: 100185054
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 11635 bases
Position: chr5:2883562-2895196
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018892	Vault	PF01505.18	1.7e-61	1	4
ENSCINP00000018892	Vault	PF01505.18	1.7e-61	2	4
ENSCINP00000018892	Vault	PF01505.18	1.7e-61	3	4
ENSCINP00000018892	Vault	PF01505.18	1.7e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018892	-	2622	-	ENSCINP00000018892	859 (aa)	-	F7B9N2

Gene Model

Click here to download ENSCING00000012198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012198	-	98	64.603	ENSG00000013364	MVP	100	76.316	Homo_sapiens
ENSCING00000012198	-	97	65.658	ENSAPOG00000008671	mvp	98	65.698	Acanthochromis_polyacanthus
ENSCING00000012198	-	99	63.805	ENSAMEG00000014878	MVP	97	63.805	Ailuropoda_melanoleuca
ENSCING00000012198	-	99	66.937	ENSACIG00000024427	mvp	99	66.937	Amphilophus_citrinellus
ENSCING00000012198	-	63	66.851	ENSAOCG00000021379	mvp	95	67.304	Amphiprion_ocellaris
ENSCING00000012198	-	97	66.316	ENSAPEG00000007015	mvp	97	66.316	Amphiprion_percula
ENSCING00000012198	-	98	66.280	ENSATEG00000017429	mvp	98	66.396	Anabas_testudineus
ENSCING00000012198	-	97	67.780	ENSACAG00000014742	MVP	97	67.780	Anolis_carolinensis
ENSCING00000012198	-	98	64.486	ENSANAG00000025785	MVP	96	64.486	Aotus_nancymaae
ENSCING00000012198	-	99	64.151	ENSACLG00000016512	mvp	99	64.444	Astatotilapia_calliptera
ENSCING00000012198	-	97	67.019	ENSAMXG00000039149	mvp	97	67.371	Astyanax_mexicanus
ENSCING00000012198	-	99	64.617	ENSBTAG00000007952	MVP	97	64.617	Bos_taurus
ENSCING00000012198	-	98	64.252	ENSCJAG00000007166	MVP	96	64.252	Callithrix_jacchus
ENSCING00000012198	-	99	63.921	ENSCAFG00000016970	MVP	97	63.921	Canis_familiaris
ENSCING00000012198	-	99	63.921	ENSCAFG00020017730	MVP	97	63.921	Canis_lupus_dingo
ENSCING00000012198	-	98	64.610	ENSCHIG00000007963	MVP	96	64.610	Capra_hircus
ENSCING00000012198	-	97	63.518	ENSTSYG00000004093	MVP	96	63.520	Carlito_syrichta
ENSCING00000012198	-	98	62.911	ENSCAPG00000015186	MVP	95	63.028	Cavia_aperea
ENSCING00000012198	-	98	64.261	ENSCPOG00000007374	MVP	99	64.261	Cavia_porcellus
ENSCING00000012198	-	88	65.566	ENSCCAG00000033828	-	95	52.774	Cebus_capucinus
ENSCING00000012198	-	77	64.053	ENSCCAG00000026419	-	95	64.053	Cebus_capucinus
ENSCING00000012198	-	98	61.792	ENSCATG00000036298	MVP	96	61.792	Cercocebus_atys
ENSCING00000012198	-	98	63.594	ENSCLAG00000011381	MVP	96	63.594	Chinchilla_lanigera
ENSCING00000012198	-	98	64.486	ENSCSAG00000006120	MVP	96	64.486	Chlorocebus_sabaeus
ENSCING00000012198	-	98	49.712	ENSCANG00000041427	MVP	95	52.765	Colobus_angolensis_palliatus
ENSCING00000012198	-	98	64.028	ENSCGRG00001015253	Mvp	99	64.028	Cricetulus_griseus_chok1gshd
ENSCING00000012198	-	98	64.136	ENSCGRG00000006655	Mvp	99	64.136	Cricetulus_griseus_crigri
ENSCING00000012198	-	97	65.581	ENSCSEG00000008233	mvp	95	65.581	Cynoglossus_semilaevis
ENSCING00000012198	-	99	65.904	ENSCVAG00000014286	mvp	99	66.018	Cyprinodon_variegatus
ENSCING00000012198	-	97	66.120	ENSDARG00000021242	mvp	98	66.471	Danio_rerio
ENSCING00000012198	-	98	65.135	ENSDNOG00000040061	MVP	97	65.135	Dasypus_novemcinctus
ENSCING00000012198	-	97	64.497	ENSDORG00000007996	Mvp	97	64.486	Dipodomys_ordii
ENSCING00000012198	-	97	64.706	ENSETEG00000004009	MVP	86	64.706	Echinops_telfairi
ENSCING00000012198	-	90	67.363	ENSEBUG00000003566	-	99	67.363	Eptatretus_burgeri
ENSCING00000012198	-	99	63.963	ENSEASG00005013194	MVP	98	64.277	Equus_asinus_asinus
ENSCING00000012198	-	98	64.336	ENSECAG00000025091	MVP	97	63.812	Equus_caballus
ENSCING00000012198	-	86	63.971	ENSEEUG00000015545	MVP	80	63.971	Erinaceus_europaeus
ENSCING00000012198	-	98	66.395	ENSELUG00000024149	mvp	99	66.462	Esox_lucius
ENSCING00000012198	-	99	63.647	ENSFCAG00000014153	MVP	96	63.647	Felis_catus
ENSCING00000012198	-	99	62.168	ENSFDAG00000007611	MVP	99	62.168	Fukomys_damarensis
ENSCING00000012198	-	98	63.570	ENSFHEG00000022085	mvp	99	63.570	Fundulus_heteroclitus
ENSCING00000012198	-	76	54.009	ENSGMOG00000018225	mvp	99	54.009	Gadus_morhua
ENSCING00000012198	-	97	61.374	ENSGALG00000040471	MVP	99	61.374	Gallus_gallus
ENSCING00000012198	-	98	65.701	ENSGAFG00000020182	mvp	99	65.933	Gambusia_affinis
ENSCING00000012198	-	98	63.991	ENSGACG00000015023	mvp	99	63.679	Gasterosteus_aculeatus
ENSCING00000012198	-	94	64.187	ENSGAGG00000018515	MVP	99	64.366	Gopherus_agassizii
ENSCING00000012198	-	98	64.603	ENSGGOG00000015603	MVP	96	64.603	Gorilla_gorilla
ENSCING00000012198	-	99	65.643	ENSHBUG00000019312	mvp	99	65.984	Haplochromis_burtoni
ENSCING00000012198	-	98	64.843	ENSHGLG00000019034	MVP	95	64.843	Heterocephalus_glaber_female
ENSCING00000012198	-	98	59.649	ENSHGLG00100017258	MVP	99	59.649	Heterocephalus_glaber_male
ENSCING00000012198	-	98	65.087	ENSHCOG00000002602	mvp	98	65.087	Hippocampus_comes
ENSCING00000012198	-	97	66.080	ENSIPUG00000002045	mvp	97	66.432	Ictalurus_punctatus
ENSCING00000012198	-	98	58.372	ENSSTOG00000001480	MVP	98	54.142	Ictidomys_tridecemlineatus
ENSCING00000012198	-	98	64.136	ENSJJAG00000015211	Mvp	96	64.252	Jaculus_jaculus
ENSCING00000012198	-	98	65.823	ENSKMAG00000009170	mvp	98	65.823	Kryptolebias_marmoratus
ENSCING00000012198	-	99	64.813	ENSLBEG00000012831	mvp	99	64.932	Labrus_bergylta
ENSCING00000012198	-	97	69.167	ENSLACG00000006862	MVP	98	69.167	Latimeria_chalumnae
ENSCING00000012198	-	97	61.366	ENSLAFG00000005520	-	99	61.019	Loxodonta_africana
ENSCING00000012198	-	98	64.603	ENSMFAG00000032090	MVP	96	64.603	Macaca_fascicularis
ENSCING00000012198	-	98	64.603	ENSMMUG00000016422	MVP	96	64.603	Macaca_mulatta
ENSCING00000012198	-	98	64.486	ENSMNEG00000039450	MVP	96	64.486	Macaca_nemestrina
ENSCING00000012198	-	98	64.603	ENSMLEG00000036661	MVP	96	64.603	Mandrillus_leucophaeus
ENSCING00000012198	-	98	65.933	ENSMAMG00000017792	mvp	98	65.972	Mastacembelus_armatus
ENSCING00000012198	-	99	65.757	ENSMZEG00005002831	mvp	99	66.098	Maylandia_zebra
ENSCING00000012198	-	97	55.332	ENSMGAG00000003200	MVP	98	65.366	Meleagris_gallopavo
ENSCING00000012198	-	99	64.005	ENSMAUG00000009864	Mvp	99	64.005	Mesocricetus_auratus
ENSCING00000012198	-	98	68.889	ENSMICG00000010206	MVP	95	64.512	Microcebus_murinus
ENSCING00000012198	-	98	63.795	ENSMOCG00000021967	Mvp	99	63.795	Microtus_ochrogaster
ENSCING00000012198	-	98	63.658	ENSMMOG00000012669	mvp	99	63.658	Mola_mola
ENSCING00000012198	-	97	64.000	ENSMODG00000015756	MVP	95	63.657	Monodelphis_domestica
ENSCING00000012198	-	91	65.963	ENSMALG00000019911	mvp	98	66.211	Monopterus_albus
ENSCING00000012198	-	99	64.079	MGP_CAROLIEiJ_G0030478	Mvp	99	64.079	Mus_caroli
ENSCING00000012198	-	99	64.195	ENSMUSG00000030681	Mvp	99	64.195	Mus_musculus
ENSCING00000012198	-	99	64.195	MGP_PahariEiJ_G0013688	Mvp	99	64.195	Mus_pahari
ENSCING00000012198	-	99	64.195	MGP_SPRETEiJ_G0031592	Mvp	99	64.195	Mus_spretus
ENSCING00000012198	-	98	63.986	ENSMPUG00000012462	MVP	86	63.986	Mustela_putorius_furo
ENSCING00000012198	-	98	56.643	ENSMLUG00000012898	MVP	96	56.643	Myotis_lucifugus
ENSCING00000012198	-	97	63.593	ENSNGAG00000012766	Mvp	97	63.435	Nannospalax_galili
ENSCING00000012198	-	98	57.778	ENSNLEG00000007564	-	95	50.534	Nomascus_leucogenys
ENSCING00000012198	-	89	67.039	ENSMEUG00000014942	MVP	90	67.039	Notamacropus_eugenii
ENSCING00000012198	-	98	62.089	ENSOPRG00000009511	MVP	96	62.089	Ochotona_princeps
ENSCING00000012198	-	97	60.950	ENSODEG00000015812	MVP	92	65.646	Octodon_degus
ENSCING00000012198	-	97	67.417	ENSONIG00000009362	mvp	99	67.417	Oreochromis_niloticus
ENSCING00000012198	-	98	64.419	ENSOANG00000007170	MVP	98	64.419	Ornithorhynchus_anatinus
ENSCING00000012198	-	98	64.136	ENSOCUG00000008668	MVP	96	64.136	Oryctolagus_cuniculus
ENSCING00000012198	-	98	65.006	ENSORLG00000019976	mvp	99	65.006	Oryzias_latipes
ENSCING00000012198	-	98	66.358	ENSORLG00020000633	mvp	99	67.089	Oryzias_latipes_hni
ENSCING00000012198	-	98	65.820	ENSOMEG00000020196	mvp	99	65.820	Oryzias_melastigma
ENSCING00000012198	-	98	62.045	ENSOGAG00000010511	MVP	95	62.089	Otolemur_garnettii
ENSCING00000012198	-	98	64.460	ENSOARG00000005356	MVP	96	64.460	Ovis_aries
ENSCING00000012198	-	98	61.675	ENSPPAG00000036492	MVP	96	61.675	Pan_paniscus
ENSCING00000012198	-	98	64.603	ENSPTRG00000007971	MVP	96	64.603	Pan_troglodytes
ENSCING00000012198	-	98	64.603	ENSPANG00000016369	MVP	96	64.603	Papio_anubis
ENSCING00000012198	-	98	60.803	ENSPKIG00000018322	mvp	99	60.803	Paramormyrops_kingsleyae
ENSCING00000012198	-	98	67.139	ENSPMGG00000006617	mvp	99	67.258	Periophthalmus_magnuspinnatus
ENSCING00000012198	-	98	63.711	ENSPEMG00000000532	Mvp	99	63.711	Peromyscus_maniculatus_bairdii
ENSCING00000012198	-	98	64.959	ENSPCIG00000025128	MVP	94	65.111	Phascolarctos_cinereus
ENSCING00000012198	-	98	66.049	ENSPFOG00000009770	mvp	98	66.280	Poecilia_formosa
ENSCING00000012198	-	58	58.788	ENSPLAG00000016176	mvp	78	58.788	Poecilia_latipinna
ENSCING00000012198	-	98	66.165	ENSPMEG00000009616	mvp	98	66.396	Poecilia_mexicana
ENSCING00000012198	-	98	65.856	ENSPREG00000011953	mvp	98	65.972	Poecilia_reticulata
ENSCING00000012198	-	98	64.720	ENSPPYG00000007257	-	98	64.720	Pongo_abelii
ENSCING00000012198	-	98	61.682	ENSPPYG00000019352	-	96	61.682	Pongo_abelii
ENSCING00000012198	-	76	69.388	ENSPCAG00000010750	MVP	73	69.388	Procavia_capensis
ENSCING00000012198	-	98	64.630	ENSPCOG00000007547	MVP	95	64.630	Propithecus_coquereli
ENSCING00000012198	-	98	60.870	ENSPVAG00000017213	MVP	95	60.870	Pteropus_vampyrus
ENSCING00000012198	-	98	67.738	ENSPNYG00000012193	mvp	99	67.738	Pundamilia_nyererei
ENSCING00000012198	-	97	66.940	ENSPNAG00000004713	mvp	97	67.292	Pygocentrus_nattereri
ENSCING00000012198	-	98	64.144	ENSRNOG00000020182	Mvp	99	64.144	Rattus_norvegicus
ENSCING00000012198	-	98	62.326	ENSRBIG00000032912	MVP	96	62.326	Rhinopithecus_bieti
ENSCING00000012198	-	98	64.486	ENSRROG00000032290	MVP	96	64.486	Rhinopithecus_roxellana
ENSCING00000012198	-	98	64.603	ENSSBOG00000022115	MVP	96	64.603	Saimiri_boliviensis_boliviensis
ENSCING00000012198	-	98	64.520	ENSSHAG00000009673	MVP	98	64.520	Sarcophilus_harrisii
ENSCING00000012198	-	98	64.672	ENSSFOG00015001397	mvp	98	65.017	Scleropages_formosus
ENSCING00000012198	-	97	64.671	ENSSMAG00000014869	mvp	99	64.671	Scophthalmus_maximus
ENSCING00000012198	-	99	65.490	ENSSDUG00000006071	mvp	99	65.415	Seriola_dumerili
ENSCING00000012198	-	64	67.879	ENSSARG00000013146	-	79	67.879	Sorex_araneus
ENSCING00000012198	-	97	67.143	ENSSPUG00000010594	MVP	99	67.143	Sphenodon_punctatus
ENSCING00000012198	-	99	65.336	ENSSPAG00000018918	mvp	99	65.376	Stegastes_partitus
ENSCING00000012198	-	98	64.747	ENSSSCG00000027946	MVP	96	64.269	Sus_scrofa
ENSCING00000012198	-	98	65.680	ENSTRUG00000000022	mvp	98	65.680	Takifugu_rubripes
ENSCING00000012198	-	56	66.049	ENSTNIG00000006502	mvp	99	66.049	Tetraodon_nigroviridis
ENSCING00000012198	-	91	67.513	ENSTBEG00000007045	MVP	89	67.513	Tupaia_belangeri
ENSCING00000012198	-	98	64.865	ENSTTRG00000005451	MVP	95	64.865	Tursiops_truncatus
ENSCING00000012198	-	99	63.921	ENSVVUG00000026093	MVP	97	63.921	Vulpes_vulpes
ENSCING00000012198	-	95	64.259	ENSXETG00000004670	mvp	99	64.259	Xenopus_tropicalis
ENSCING00000012198	-	97	57.396	ENSXCOG00000004286	mvp	99	57.633	Xiphophorus_couchianus
ENSCING00000012198	-	97	65.854	ENSXMAG00000009640	mvp	97	65.970	Xiphophorus_maculatus