EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012500 (Gene tree)
Gene ID: 100181122
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2213 bases
Position: chr3:5418916-5421128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023300	2OG-FeII_Oxy	PF03171.20	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000023546	-	1419	-	ENSCINP00000023300	323 (aa)	-	F6S5X9

Gene Model

Click here to download ENSCING00000012500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012500	-	71	36.596	ENSAPOG00000011678	si:dkey-10o6.2	79	36.596	Acanthochromis_polyacanthus
ENSCING00000012500	-	97	32.188	ENSACIG00000011675	-	98	32.188	Amphilophus_citrinellus
ENSCING00000012500	-	87	34.948	ENSACIG00000024115	si:dkey-10o6.2	89	34.948	Amphilophus_citrinellus
ENSCING00000012500	-	98	33.746	ENSAOCG00000013068	si:dkey-10o6.2	99	33.746	Amphiprion_ocellaris
ENSCING00000012500	-	98	33.437	ENSAPEG00000011246	si:dkey-10o6.2	99	33.437	Amphiprion_percula
ENSCING00000012500	-	97	34.062	ENSATEG00000021952	si:dkey-10o6.2	98	34.062	Anabas_testudineus
ENSCING00000012500	-	97	33.540	ENSATEG00000021945	si:dkey-10o6.2	98	33.540	Anabas_testudineus
ENSCING00000012500	-	97	34.783	ENSATEG00000000030	si:dkey-10o6.2	98	34.783	Anabas_testudineus
ENSCING00000012500	-	97	33.230	ENSACLG00000023011	si:dkey-10o6.2	98	33.230	Astatotilapia_calliptera
ENSCING00000012500	-	87	34.859	ENSAMXG00000021555	si:dkey-10o6.2	90	34.859	Astyanax_mexicanus
ENSCING00000012500	-	88	36.458	ENSCING00000007255	-	87	36.458	Ciona_intestinalis
ENSCING00000012500	-	97	43.354	ENSCING00000016920	-	93	43.354	Ciona_intestinalis
ENSCING00000012500	-	98	51.104	ENSCING00000022311	-	98	51.104	Ciona_intestinalis
ENSCING00000012500	-	73	44.255	ENSCING00000011926	-	99	44.255	Ciona_intestinalis
ENSCING00000012500	-	75	60.166	ENSCSAVG00000001337	-	99	60.166	Ciona_savignyi
ENSCING00000012500	-	97	44.514	ENSCSAVG00000004616	-	98	44.514	Ciona_savignyi
ENSCING00000012500	-	57	34.197	ENSCSAVG00000004871	-	99	34.197	Ciona_savignyi
ENSCING00000012500	-	52	44.970	ENSCSAVG00000001775	-	99	44.970	Ciona_savignyi
ENSCING00000012500	-	98	58.044	ENSCSAVG00000000201	-	98	58.044	Ciona_savignyi
ENSCING00000012500	-	87	35.192	ENSCSEG00000000918	si:dkey-10o6.2	89	35.192	Cynoglossus_semilaevis
ENSCING00000012500	-	87	33.910	ENSCSEG00000000927	si:dkey-10o6.2	90	33.910	Cynoglossus_semilaevis
ENSCING00000012500	-	97	36.646	ENSCVAG00000015074	si:dkey-10o6.2	98	36.646	Cyprinodon_variegatus
ENSCING00000012500	-	97	33.022	ENSDARG00000074628	si:dkey-10o6.2	87	33.022	Danio_rerio
ENSCING00000012500	-	87	35.294	ENSELUG00000003488	si:dkey-10o6.2	91	35.294	Esox_lucius
ENSCING00000012500	-	97	35.404	ENSFHEG00000019035	si:dkey-10o6.2	98	35.404	Fundulus_heteroclitus
ENSCING00000012500	-	87	37.979	ENSGMOG00000018989	si:dkey-10o6.2	92	37.979	Gadus_morhua
ENSCING00000012500	-	98	35.913	ENSGAFG00000006137	si:dkey-10o6.2	99	35.913	Gambusia_affinis
ENSCING00000012500	-	87	33.108	ENSGACG00000006806	si:dkey-10o6.2	90	33.108	Gasterosteus_aculeatus
ENSCING00000012500	-	97	33.230	ENSHBUG00000008853	si:dkey-10o6.2	98	33.230	Haplochromis_burtoni
ENSCING00000012500	-	87	36.552	ENSHCOG00000017671	-	90	36.552	Hippocampus_comes
ENSCING00000012500	-	87	34.138	ENSHCOG00000017626	si:dkey-10o6.2	90	34.138	Hippocampus_comes
ENSCING00000012500	-	98	32.812	ENSIPUG00000018879	si:dkey-10o6.2	88	32.686	Ictalurus_punctatus
ENSCING00000012500	-	98	32.812	ENSIPUG00000018911	-	98	32.812	Ictalurus_punctatus
ENSCING00000012500	-	97	33.645	ENSKMAG00000006197	si:dkey-10o6.2	98	33.645	Kryptolebias_marmoratus
ENSCING00000012500	-	87	34.266	ENSLBEG00000003823	si:dkey-10o6.2	82	34.266	Labrus_bergylta
ENSCING00000012500	-	97	31.975	ENSLBEG00000003839	si:dkey-10o6.2	98	31.975	Labrus_bergylta
ENSCING00000012500	-	97	33.645	ENSMAMG00000023022	si:dkey-10o6.2	98	33.645	Mastacembelus_armatus
ENSCING00000012500	-	97	34.268	ENSMAMG00000023020	si:dkey-10o6.2	98	34.268	Mastacembelus_armatus
ENSCING00000012500	-	98	34.568	ENSMAMG00000023025	-	99	34.568	Mastacembelus_armatus
ENSCING00000012500	-	98	33.333	ENSMAMG00000023026	-	99	33.333	Mastacembelus_armatus
ENSCING00000012500	-	97	33.230	ENSMZEG00005012018	si:dkey-10o6.2	98	33.230	Maylandia_zebra
ENSCING00000012500	-	94	33.657	ENSMMOG00000020383	si:dkey-10o6.2	91	33.657	Mola_mola
ENSCING00000012500	-	87	36.770	ENSMALG00000011300	si:dkey-10o6.2	90	36.770	Monopterus_albus
ENSCING00000012500	-	97	31.056	ENSNBRG00000015840	si:dkey-10o6.2	98	31.056	Neolamprologus_brichardi
ENSCING00000012500	-	97	33.851	ENSONIG00000015572	si:dkey-10o6.2	98	33.851	Oreochromis_niloticus
ENSCING00000012500	-	97	35.312	ENSORLG00000001314	si:dkey-10o6.2	98	35.312	Oryzias_latipes
ENSCING00000012500	-	97	35.312	ENSORLG00020002660	si:dkey-10o6.2	98	35.312	Oryzias_latipes_hni
ENSCING00000012500	-	97	33.956	ENSOMEG00000003617	si:dkey-10o6.2	96	33.956	Oryzias_melastigma
ENSCING00000012500	-	87	38.163	ENSPKIG00000024109	-	89	38.163	Paramormyrops_kingsleyae
ENSCING00000012500	-	98	34.169	ENSPKIG00000004183	si:dkey-10o6.2	86	34.169	Paramormyrops_kingsleyae
ENSCING00000012500	-	98	34.169	ENSPKIG00000004206	si:dkey-10o6.2	80	34.169	Paramormyrops_kingsleyae
ENSCING00000012500	-	87	31.707	ENSPMGG00000021603	si:dkey-10o6.2	90	32.056	Periophthalmus_magnuspinnatus
ENSCING00000012500	-	99	34.049	ENSPFOG00000017244	si:dkey-10o6.2	99	34.049	Poecilia_formosa
ENSCING00000012500	-	87	36.111	ENSPLAG00000008037	si:dkey-10o6.2	91	36.111	Poecilia_latipinna
ENSCING00000012500	-	70	37.118	ENSPMEG00000020748	si:dkey-10o6.2	95	37.118	Poecilia_mexicana
ENSCING00000012500	-	98	35.093	ENSPREG00000005108	si:dkey-10o6.2	99	35.093	Poecilia_reticulata
ENSCING00000012500	-	97	32.919	ENSPNYG00000010698	si:dkey-10o6.2	98	32.919	Pundamilia_nyererei
ENSCING00000012500	-	87	36.111	ENSPNAG00000014123	si:dkey-10o6.2	89	36.111	Pygocentrus_nattereri
ENSCING00000012500	-	63	38.235	ENSPNAG00000014485	-	60	38.235	Pygocentrus_nattereri
ENSCING00000012500	-	89	36.770	ENSSFOG00015015345	si:dkey-10o6.2	92	36.770	Scleropages_formosus
ENSCING00000012500	-	87	36.237	ENSSMAG00000019016	si:dkey-10o6.2	90	36.237	Scophthalmus_maximus
ENSCING00000012500	-	97	33.230	ENSSDUG00000000943	si:dkey-10o6.2	98	33.230	Seriola_dumerili
ENSCING00000012500	-	97	32.919	ENSSLDG00000003462	si:dkey-10o6.2	98	32.919	Seriola_lalandi_dorsalis
ENSCING00000012500	-	97	34.161	ENSSPAG00000020962	si:dkey-10o6.2	98	34.161	Stegastes_partitus
ENSCING00000012500	-	87	33.218	ENSTRUG00000019532	si:dkey-10o6.2	90	33.218	Takifugu_rubripes
ENSCING00000012500	-	98	34.365	ENSXCOG00000000855	si:dkey-10o6.2	99	34.365	Xiphophorus_couchianus
ENSCING00000012500	-	98	35.294	ENSXMAG00000012432	si:dkey-10o6.2	99	35.294	Xiphophorus_maculatus