EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012518 (Gene tree)
Gene ID: 100184230
Gene Symbol: -
Alias: -
Full Name: G patch domain-containing protein 1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2415 bases
Position: chr3:5579985-5582399
Accession: 100184230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023326	DUF1604	PF07713.13	4.1e-35	1	1
ENSCINP00000023326	G-patch	PF01585.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000023572	-	2415	XM_002128108	ENSCINP00000023326	805 (aa)	XP_002128144	F7BDS7

Gene Model

Click here to download ENSCING00000012518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012518	-	95	33.295	ENSG00000076650	GPATCH1	73	55.319	Homo_sapiens
ENSCING00000012518	-	99	33.333	ENSAMEG00000015575	GPATCH1	93	32.584	Ailuropoda_melanoleuca
ENSCING00000012518	-	84	47.685	ENSAOCG00000006668	gpatch1	77	48.095	Amphiprion_ocellaris
ENSCING00000012518	-	84	34.065	ENSAPEG00000000026	gpatch1	68	36.728	Amphiprion_percula
ENSCING00000012518	-	83	34.469	ENSATEG00000014494	gpatch1	68	36.530	Anabas_testudineus
ENSCING00000012518	-	72	37.008	ENSAPLG00000007584	GPATCH1	69	37.008	Anas_platyrhynchos
ENSCING00000012518	-	95	33.256	ENSANAG00000027002	GPATCH1	92	32.402	Aotus_nancymaae
ENSCING00000012518	-	74	36.350	ENSACLG00000024740	gpatch1	66	36.556	Astatotilapia_calliptera
ENSCING00000012518	-	74	35.521	ENSAMXG00000020177	gpatch1	72	35.714	Astyanax_mexicanus
ENSCING00000012518	-	90	34.170	ENSBTAG00000000721	GPATCH1	68	37.191	Bos_taurus
ENSCING00000012518	-	72	30.111	WBGene00011109	R07E5.1	67	30.757	Caenorhabditis_elegans
ENSCING00000012518	-	95	33.718	ENSCJAG00000000684	GPATCH1	92	32.519	Callithrix_jacchus
ENSCING00000012518	-	95	35.342	ENSCAFG00000007457	GPATCH1	68	35.901	Canis_familiaris
ENSCING00000012518	-	95	35.342	ENSCAFG00020019731	GPATCH1	81	35.901	Canis_lupus_dingo
ENSCING00000012518	-	84	35.668	ENSCHIG00000019626	GPATCH1	83	35.602	Capra_hircus
ENSCING00000012518	-	80	34.516	ENSCAPG00000008827	GPATCH1	68	36.201	Cavia_aperea
ENSCING00000012518	-	99	32.995	ENSCPOG00000024477	GPATCH1	66	34.615	Cavia_porcellus
ENSCING00000012518	-	95	33.179	ENSCCAG00000024676	GPATCH1	94	32.265	Cebus_capucinus
ENSCING00000012518	-	84	33.766	ENSCATG00000043637	GPATCH1	73	56.383	Cercocebus_atys
ENSCING00000012518	-	81	35.223	ENSCLAG00000003395	-	95	33.333	Chinchilla_lanigera
ENSCING00000012518	-	84	33.333	ENSCSAG00000004743	GPATCH1	93	31.908	Chlorocebus_sabaeus
ENSCING00000012518	-	81	36.103	ENSCPBG00000000666	GPATCH1	92	36.338	Chrysemys_picta_bellii
ENSCING00000012518	-	70	38.264	ENSCANG00000012540	GPATCH1	82	38.387	Colobus_angolensis_palliatus
ENSCING00000012518	-	81	34.270	ENSCGRG00001016736	Gpatch1	67	36.320	Cricetulus_griseus_chok1gshd
ENSCING00000012518	-	81	30.357	ENSCGRG00000005069	Gpatch1	63	31.757	Cricetulus_griseus_crigri
ENSCING00000012518	-	88	36.784	ENSCSEG00000019456	-	89	51.304	Cynoglossus_semilaevis
ENSCING00000012518	-	95	32.963	ENSDARG00000033418	gpatch1	91	33.851	Danio_rerio
ENSCING00000012518	-	95	34.266	ENSDNOG00000005291	GPATCH1	96	33.109	Dasypus_novemcinctus
ENSCING00000012518	-	95	34.634	ENSDORG00000012546	Gpatch1	84	34.610	Dipodomys_ordii
ENSCING00000012518	-	74	36.434	ENSETEG00000003626	GPATCH1	69	36.491	Echinops_telfairi
ENSCING00000012518	-	99	30.212	ENSEBUG00000011286	gpatch1	83	31.039	Eptatretus_burgeri
ENSCING00000012518	-	90	34.438	ENSEASG00005021162	GPATCH1	87	35.649	Equus_asinus_asinus
ENSCING00000012518	-	84	35.714	ENSECAG00000022743	GPATCH1	66	37.558	Equus_caballus
ENSCING00000012518	-	95	33.713	ENSELUG00000018195	gpatch1	89	34.589	Esox_lucius
ENSCING00000012518	-	99	33.296	ENSFCAG00000014917	GPATCH1	93	32.363	Felis_catus
ENSCING00000012518	-	84	34.403	ENSFALG00000007821	GPATCH1	68	37.481	Ficedula_albicollis
ENSCING00000012518	-	80	34.979	ENSFDAG00000003871	GPATCH1	94	31.787	Fukomys_damarensis
ENSCING00000012518	-	74	34.733	ENSGMOG00000003830	gpatch1	73	34.733	Gadus_morhua
ENSCING00000012518	-	99	33.073	ENSGALG00000004839	GPATCH1	93	34.062	Gallus_gallus
ENSCING00000012518	-	95	33.642	ENSGACG00000017544	gpatch1	93	32.834	Gasterosteus_aculeatus
ENSCING00000012518	-	95	34.316	ENSGAGG00000010067	GPATCH1	68	37.774	Gopherus_agassizii
ENSCING00000012518	-	92	33.254	ENSGGOG00000010862	GPATCH1	80	33.691	Gorilla_gorilla
ENSCING00000012518	-	74	36.501	ENSHBUG00000023462	gpatch1	91	34.157	Haplochromis_burtoni
ENSCING00000012518	-	98	33.560	ENSHGLG00000009334	GPATCH1	93	32.288	Heterocephalus_glaber_female
ENSCING00000012518	-	98	33.447	ENSHGLG00100018074	GPATCH1	92	32.621	Heterocephalus_glaber_male
ENSCING00000012518	-	74	36.484	ENSIPUG00000014977	gpatch1	67	36.538	Ictalurus_punctatus
ENSCING00000012518	-	89	34.078	ENSSTOG00000003720	GPATCH1	81	34.710	Ictidomys_tridecemlineatus
ENSCING00000012518	-	84	34.496	ENSJJAG00000023765	Gpatch1	68	36.350	Jaculus_jaculus
ENSCING00000012518	-	74	36.980	ENSKMAG00000017950	gpatch1	68	36.980	Kryptolebias_marmoratus
ENSCING00000012518	-	74	34.655	ENSLBEG00000026527	gpatch1	88	32.327	Labrus_bergylta
ENSCING00000012518	-	82	35.128	ENSLACG00000008130	GPATCH1	67	38.278	Latimeria_chalumnae
ENSCING00000012518	-	84	34.460	ENSLOCG00000001800	gpatch1	90	33.566	Lepisosteus_oculatus
ENSCING00000012518	-	95	34.149	ENSLAFG00000013589	GPATCH1	86	35.125	Loxodonta_africana
ENSCING00000012518	-	95	32.874	ENSMFAG00000034418	GPATCH1	73	56.383	Macaca_fascicularis
ENSCING00000012518	-	84	33.679	ENSMMUG00000011790	GPATCH1	73	55.319	Macaca_mulatta
ENSCING00000012518	-	95	33.103	ENSMNEG00000045084	GPATCH1	73	56.383	Macaca_nemestrina
ENSCING00000012518	-	74	36.350	ENSMZEG00005001926	gpatch1	66	36.556	Maylandia_zebra
ENSCING00000012518	-	95	34.673	ENSMGAG00000005775	GPATCH1	69	36.322	Meleagris_gallopavo
ENSCING00000012518	-	84	34.545	ENSMOCG00000000174	Gpatch1	76	35.534	Microtus_ochrogaster
ENSCING00000012518	-	74	35.580	ENSMMOG00000002140	gpatch1	71	35.893	Mola_mola
ENSCING00000012518	-	98	32.597	ENSMODG00000012226	GPATCH1	80	34.070	Monodelphis_domestica
ENSCING00000012518	-	74	36.199	ENSMALG00000014386	gpatch1	69	36.501	Monopterus_albus
ENSCING00000012518	-	84	34.112	ENSMUSG00000063808	Gpatch1	96	55.319	Mus_musculus
ENSCING00000012518	-	84	34.501	MGP_PahariEiJ_G0012816	Gpatch1	96	56.383	Mus_pahari
ENSCING00000012518	-	84	34.371	MGP_SPRETEiJ_G0030681	Gpatch1	96	56.383	Mus_spretus
ENSCING00000012518	-	86	35.823	ENSMPUG00000007658	GPATCH1	81	35.593	Mustela_putorius_furo
ENSCING00000012518	-	86	34.307	ENSMLUG00000012161	GPATCH1	82	33.770	Myotis_lucifugus
ENSCING00000012518	-	84	33.990	ENSNGAG00000012455	Gpatch1	92	32.772	Nannospalax_galili
ENSCING00000012518	-	84	33.593	ENSNLEG00000007659	GPATCH1	73	55.319	Nomascus_leucogenys
ENSCING00000012518	-	65	32.318	ENSMEUG00000015174	GPATCH1	61	32.149	Notamacropus_eugenii
ENSCING00000012518	-	84	34.635	ENSODEG00000007103	GPATCH1	81	34.896	Octodon_degus
ENSCING00000012518	-	74	36.157	ENSONIG00000003302	gpatch1	70	36.309	Oreochromis_niloticus
ENSCING00000012518	-	89	34.201	ENSOANG00000012732	GPATCH1	69	36.883	Ornithorhynchus_anatinus
ENSCING00000012518	-	90	34.393	ENSOCUG00000015905	GPATCH1	81	34.935	Oryctolagus_cuniculus
ENSCING00000012518	-	95	33.644	ENSORLG00000018706	gpatch1	88	33.527	Oryzias_latipes
ENSCING00000012518	-	74	35.000	ENSOMEG00000022688	gpatch1	91	32.952	Oryzias_melastigma
ENSCING00000012518	-	87	35.101	ENSOGAG00000004016	GPATCH1	96	35.547	Otolemur_garnettii
ENSCING00000012518	-	89	34.276	ENSOARG00000004365	GPATCH1	81	34.850	Ovis_aries
ENSCING00000012518	-	95	32.910	ENSPPAG00000020990	GPATCH1	74	55.789	Pan_paniscus
ENSCING00000012518	-	91	34.313	ENSPPRG00000017245	GPATCH1	93	33.109	Panthera_pardus
ENSCING00000012518	-	99	33.333	ENSPTIG00000019649	GPATCH1	93	32.366	Panthera_tigris_altaica
ENSCING00000012518	-	95	32.910	ENSPTRG00000010803	GPATCH1	73	55.319	Pan_troglodytes
ENSCING00000012518	-	95	32.870	ENSPANG00000012374	GPATCH1	97	32.587	Papio_anubis
ENSCING00000012518	-	74	35.977	ENSPKIG00000020745	gpatch1	65	35.894	Paramormyrops_kingsleyae
ENSCING00000012518	-	84	35.573	ENSPSIG00000013433	GPATCH1	68	36.991	Pelodiscus_sinensis
ENSCING00000012518	-	74	37.733	ENSPEMG00000000636	Gpatch1	68	37.481	Peromyscus_maniculatus_bairdii
ENSCING00000012518	-	84	34.625	ENSPCIG00000021003	GPATCH1	71	36.294	Phascolarctos_cinereus
ENSCING00000012518	-	74	33.025	ENSPREG00000008264	gpatch1	86	32.695	Poecilia_reticulata
ENSCING00000012518	-	84	33.333	ENSPPYG00000009824	GPATCH1	81	33.159	Pongo_abelii
ENSCING00000012518	-	74	38.636	ENSPCAG00000005931	GPATCH1	66	37.113	Procavia_capensis
ENSCING00000012518	-	90	34.198	ENSPCOG00000009674	GPATCH1	87	34.413	Propithecus_coquereli
ENSCING00000012518	-	74	35.404	ENSPVAG00000017767	GPATCH1	68	35.404	Pteropus_vampyrus
ENSCING00000012518	-	84	35.160	ENSPNYG00000018189	gpatch1	82	34.881	Pundamilia_nyererei
ENSCING00000012518	-	95	32.680	ENSPNAG00000013187	gpatch1	68	35.662	Pygocentrus_nattereri
ENSCING00000012518	-	91	34.065	ENSRNOG00000011584	Gpatch1	68	37.112	Rattus_norvegicus
ENSCING00000012518	-	95	33.641	ENSRROG00000024428	GPATCH1	73	56.383	Rhinopithecus_roxellana
ENSCING00000012518	-	84	34.241	ENSSBOG00000034650	GPATCH1	92	32.626	Saimiri_boliviensis_boliviensis
ENSCING00000012518	-	84	34.452	ENSSHAG00000016016	GPATCH1	68	35.933	Sarcophilus_harrisii
ENSCING00000012518	-	98	34.208	ENSSFOG00015011535	gpatch1	89	34.436	Scleropages_formosus
ENSCING00000012518	-	70	43.972	ENSSMAG00000002883	gpatch1	78	37.021	Scophthalmus_maximus
ENSCING00000012518	-	74	34.763	ENSSDUG00000007444	gpatch1	67	34.918	Seriola_dumerili
ENSCING00000012518	-	70	41.429	ENSSLDG00000002856	gpatch1	88	33.333	Seriola_lalandi_dorsalis
ENSCING00000012518	-	74	36.687	ENSSARG00000004108	GPATCH1	68	36.687	Sorex_araneus
ENSCING00000012518	-	90	34.777	ENSSSCG00000002865	GPATCH1	95	34.312	Sus_scrofa
ENSCING00000012518	-	74	35.823	ENSTGUG00000009401	GPATCH1	69	36.682	Taeniopygia_guttata
ENSCING00000012518	-	84	33.645	ENSTRUG00000025081	gpatch1	89	32.539	Takifugu_rubripes
ENSCING00000012518	-	84	33.645	ENSTRUG00000005785	-	89	32.539	Takifugu_rubripes
ENSCING00000012518	-	83	34.274	ENSTNIG00000002554	gpatch1	90	34.568	Tetraodon_nigroviridis
ENSCING00000012518	-	50	35.676	ENSTBEG00000007750	-	59	35.676	Tupaia_belangeri
ENSCING00000012518	-	67	42.657	ENSTTRG00000012221	GPATCH1	68	33.951	Tursiops_truncatus
ENSCING00000012518	-	93	34.375	ENSUMAG00000014645	GPATCH1	76	56.383	Ursus_maritimus
ENSCING00000012518	-	77	48.555	ENSVPAG00000010313	GPATCH1	61	48.571	Vicugna_pacos
ENSCING00000012518	-	95	35.110	ENSVVUG00000016572	GPATCH1	81	35.640	Vulpes_vulpes
ENSCING00000012518	-	84	30.799	ENSXETG00000018276	gpatch1	70	33.698	Xenopus_tropicalis