EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012556 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2686 bases
Position: chr1:7593748-7596433
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023395	Ribosomal_L35p	PF01632.19	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000023641	-	832	-	ENSCINP00000023395	260 (aa)	-	F7AAT5

Gene Model

Click here to download ENSCING00000012556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012556	-	60	41.401	ENSAMEG00000005978	MRPL35	59	46.957	Ailuropoda_melanoleuca
ENSCING00000012556	-	60	40.764	ENSATEG00000021800	mrpl35	57	49.524	Anabas_testudineus
ENSCING00000012556	-	61	41.139	ENSANAG00000030616	MRPL35	57	49.107	Aotus_nancymaae
ENSCING00000012556	-	64	36.905	ENSACLG00000021543	mrpl35	62	48.673	Astatotilapia_calliptera
ENSCING00000012556	-	64	35.882	ENSAMXG00000040020	mrpl35	65	42.857	Astyanax_mexicanus
ENSCING00000012556	-	60	41.401	ENSBTAG00000004823	MRPL35	51	49.505	Bos_taurus
ENSCING00000012556	-	55	43.056	ENSCJAG00000022808	-	57	48.214	Callithrix_jacchus
ENSCING00000012556	-	55	43.056	ENSCJAG00000019467	-	57	48.214	Callithrix_jacchus
ENSCING00000012556	-	60	41.509	ENSCAFG00000007553	MRPL35	59	46.957	Canis_familiaris
ENSCING00000012556	-	60	40.881	ENSCAFG00020016017	MRPL35	59	46.087	Canis_lupus_dingo
ENSCING00000012556	-	58	42.105	ENSCHIG00000016097	MRPL35	51	49.505	Capra_hircus
ENSCING00000012556	-	58	42.000	ENSCPOG00000012387	MRPL35	59	49.565	Cavia_porcellus
ENSCING00000012556	-	55	44.444	ENSCLAG00000004489	MRPL35	52	51.923	Chinchilla_lanigera
ENSCING00000012556	-	55	42.254	ENSCPBG00000001213	MRPL35	67	42.537	Chrysemys_picta_bellii
ENSCING00000012556	-	82	62.212	ENSCSAVG00000009271	-	75	74.691	Ciona_savignyi
ENSCING00000012556	-	62	34.783	ENSCANG00000028695	-	62	43.750	Colobus_angolensis_palliatus
ENSCING00000012556	-	56	41.096	ENSCSEG00000001344	mrpl35	74	45.255	Cynoglossus_semilaevis
ENSCING00000012556	-	60	42.138	ENSDORG00000012391	Mrpl35	60	46.957	Dipodomys_ordii
ENSCING00000012556	-	61	42.138	ENSEASG00005001655	MRPL35	53	46.957	Equus_asinus_asinus
ENSCING00000012556	-	61	41.509	ENSECAG00000024527	MRPL35	53	46.957	Equus_caballus
ENSCING00000012556	-	52	42.177	ENSELUG00000010029	mrpl35	81	42.177	Esox_lucius
ENSCING00000012556	-	60	42.038	ENSFCAG00000040448	-	57	45.763	Felis_catus
ENSCING00000012556	-	55	39.860	ENSFCAG00000025565	-	54	44.231	Felis_catus
ENSCING00000012556	-	54	39.007	ENSFDAG00000001484	MRPL35	56	45.283	Fukomys_damarensis
ENSCING00000012556	-	61	34.591	ENSGAFG00000009819	mrpl35	67	40.984	Gambusia_affinis
ENSCING00000012556	-	55	43.662	ENSGAGG00000020090	MRPL35	60	44.030	Gopherus_agassizii
ENSCING00000012556	-	64	36.905	ENSHBUG00000022325	mrpl35	62	48.673	Haplochromis_burtoni
ENSCING00000012556	-	68	37.017	ENSHGLG00100012873	MRPL35	63	48.696	Heterocephalus_glaber_male
ENSCING00000012556	-	56	40.690	ENSKMAG00000005185	mrpl35	52	53.608	Kryptolebias_marmoratus
ENSCING00000012556	-	56	39.752	ENSLACG00000002159	MRPL35	58	48.214	Latimeria_chalumnae
ENSCING00000012556	-	52	42.537	ENSLAFG00000001319	MRPL35	63	41.791	Loxodonta_africana
ENSCING00000012556	-	64	40.351	ENSMZEG00005008064	mrpl35	62	49.558	Maylandia_zebra
ENSCING00000012556	-	58	43.333	ENSMAUG00000009361	Mrpl35	63	43.284	Mesocricetus_auratus
ENSCING00000012556	-	65	39.011	ENSMICG00000000776	MRPL35	57	48.305	Microcebus_murinus
ENSCING00000012556	-	57	41.892	ENSMOCG00000008652	Mrpl35	59	46.087	Microtus_ochrogaster
ENSCING00000012556	-	56	41.026	ENSMMOG00000013882	mrpl35	61	50.442	Mola_mola
ENSCING00000012556	-	57	40.940	ENSMALG00000008539	mrpl35	72	43.511	Monopterus_albus
ENSCING00000012556	-	57	41.892	MGP_CAROLIEiJ_G0028491	Mrpl35	61	42.748	Mus_caroli
ENSCING00000012556	-	57	41.892	ENSMUSG00000052962	Mrpl35	61	42.748	Mus_musculus
ENSCING00000012556	-	57	41.216	MGP_PahariEiJ_G0022227	Mrpl35	59	45.217	Mus_pahari
ENSCING00000012556	-	57	41.216	MGP_SPRETEiJ_G0029496	Mrpl35	59	45.217	Mus_spretus
ENSCING00000012556	-	56	41.026	ENSNBRG00000008083	mrpl35	86	42.466	Neolamprologus_brichardi
ENSCING00000012556	-	58	43.333	ENSOPRG00000016834	MRPL35	66	45.038	Ochotona_princeps
ENSCING00000012556	-	59	40.260	ENSODEG00000003180	MRPL35	55	48.148	Octodon_degus
ENSCING00000012556	-	56	41.026	ENSONIG00000020132	mrpl35	80	42.466	Oreochromis_niloticus
ENSCING00000012556	-	65	39.645	ENSOCUG00000010193	MRPL35	57	47.321	Oryctolagus_cuniculus
ENSCING00000012556	-	51	47.015	ENSORLG00000015918	mrpl35	73	48.507	Oryzias_latipes
ENSCING00000012556	-	51	47.015	ENSORLG00020009134	mrpl35	73	48.507	Oryzias_latipes_hni
ENSCING00000012556	-	51	46.667	ENSORLG00015000228	mrpl35	67	46.667	Oryzias_latipes_hsok
ENSCING00000012556	-	51	46.269	ENSOMEG00000006008	mrpl35	61	52.212	Oryzias_melastigma
ENSCING00000012556	-	57	42.568	ENSOGAG00000004048	MRPL35	57	47.458	Otolemur_garnettii
ENSCING00000012556	-	60	41.401	ENSPPRG00000006561	-	57	45.763	Panthera_pardus
ENSCING00000012556	-	60	40.127	ENSPPRG00000015141	-	59	45.217	Panthera_pardus
ENSCING00000012556	-	60	39.490	ENSPTIG00000006319	-	59	45.217	Panthera_tigris_altaica
ENSCING00000012556	-	60	40.764	ENSPTIG00000019867	-	57	45.763	Panthera_tigris_altaica
ENSCING00000012556	-	57	44.000	ENSPEMG00000021175	Mrpl35	59	49.565	Peromyscus_maniculatus_bairdii
ENSCING00000012556	-	62	36.585	ENSPCIG00000004298	-	58	40.945	Phascolarctos_cinereus
ENSCING00000012556	-	61	34.783	ENSPFOG00000001115	mrpl35	64	43.966	Poecilia_formosa
ENSCING00000012556	-	61	34.783	ENSPLAG00000011281	mrpl35	64	43.966	Poecilia_latipinna
ENSCING00000012556	-	61	34.783	ENSPMEG00000004702	mrpl35	64	43.966	Poecilia_mexicana
ENSCING00000012556	-	64	37.647	ENSPREG00000014850	mrpl35	60	44.860	Poecilia_reticulata
ENSCING00000012556	-	58	43.137	ENSPCOG00000007856	MRPL35	57	47.458	Propithecus_coquereli
ENSCING00000012556	-	60	42.767	ENSPVAG00000012679	MRPL35	66	44.615	Pteropus_vampyrus
ENSCING00000012556	-	64	36.905	ENSPNYG00000022623	mrpl35	62	48.673	Pundamilia_nyererei
ENSCING00000012556	-	64	37.647	ENSPNAG00000018009	mrpl35	66	43.697	Pygocentrus_nattereri
ENSCING00000012556	-	57	41.216	ENSSBOG00000022291	MRPL35	62	47.321	Saimiri_boliviensis_boliviensis
ENSCING00000012556	-	65	34.831	ENSSFOG00015004266	mrpl35	51	46.939	Scleropages_formosus
ENSCING00000012556	-	62	40.237	ENSSMAG00000002498	mrpl35	61	47.788	Scophthalmus_maximus
ENSCING00000012556	-	60	41.772	ENSSSCG00000021746	MRPL35	59	47.414	Sus_scrofa
ENSCING00000012556	-	60	42.675	ENSTBEG00000015366	MRPL35	58	48.305	Tupaia_belangeri
ENSCING00000012556	-	60	41.401	ENSTTRG00000010371	MRPL35	57	46.429	Tursiops_truncatus
ENSCING00000012556	-	60	41.401	ENSUAMG00000025275	MRPL35	59	46.957	Ursus_americanus
ENSCING00000012556	-	60	41.401	ENSUMAG00000007891	MRPL35	59	46.957	Ursus_maritimus
ENSCING00000012556	-	57	43.243	ENSVPAG00000012004	MRPL35	59	46.957	Vicugna_pacos
ENSCING00000012556	-	67	33.333	ENSVVUG00000000063	MRPL35	57	35.338	Vulpes_vulpes
ENSCING00000012556	-	65	40.000	ENSXETG00000028100	mrpl35	61	43.511	Xenopus_tropicalis
ENSCING00000012556	-	54	39.865	ENSXCOG00000008830	mrpl35	71	39.695	Xiphophorus_couchianus
ENSCING00000012556	-	54	39.597	ENSXMAG00000013548	mrpl35	72	38.806	Xiphophorus_maculatus