EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012641 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4495 bases
Position: chr1:6949921-6954415
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023498	MMR_HSR1	PF01926.23	6.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000023744	-	1136	-	ENSCINP00000023498	358 (aa)	-	F6WS50

Gene Model

Click here to download ENSCING00000012641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012641	-	98	53.693	ENSG00000105793	GTPBP10	98	55.981	Homo_sapiens
ENSCING00000012641	-	99	50.541	ENSAPOG00000024081	gtpbp10	93	52.247	Acanthochromis_polyacanthus
ENSCING00000012641	-	98	53.977	ENSAMEG00000011273	GTPBP10	88	53.977	Ailuropoda_melanoleuca
ENSCING00000012641	-	96	48.688	ENSACIG00000011274	gtpbp10	90	48.688	Amphilophus_citrinellus
ENSCING00000012641	-	92	48.640	ENSAOCG00000013674	gtpbp10	91	48.640	Amphiprion_ocellaris
ENSCING00000012641	-	99	51.541	ENSAPEG00000002756	gtpbp10	93	51.685	Amphiprion_percula
ENSCING00000012641	-	99	50.139	ENSATEG00000000187	gtpbp10	93	50.139	Anabas_testudineus
ENSCING00000012641	-	98	55.114	ENSAPLG00000006290	GTPBP10	93	55.114	Anas_platyrhynchos
ENSCING00000012641	-	100	53.911	ENSACAG00000015854	GTPBP10	94	53.911	Anolis_carolinensis
ENSCING00000012641	-	98	53.672	ENSANAG00000020267	GTPBP10	88	53.672	Aotus_nancymaae
ENSCING00000012641	-	99	50.279	ENSACLG00000017490	gtpbp10	93	50.279	Astatotilapia_calliptera
ENSCING00000012641	-	96	50.291	ENSAMXG00000001853	gtpbp10	83	50.000	Astyanax_mexicanus
ENSCING00000012641	-	98	53.125	ENSBTAG00000032166	GTPBP10	88	53.429	Bos_taurus
ENSCING00000012641	-	92	34.503	WBGene00016145	C26E6.12	85	34.503	Caenorhabditis_elegans
ENSCING00000012641	-	98	54.237	ENSCJAG00000014212	GTPBP10	88	54.237	Callithrix_jacchus
ENSCING00000012641	-	98	53.977	ENSCAFG00000001882	GTPBP10	89	54.286	Canis_familiaris
ENSCING00000012641	-	98	53.977	ENSCAFG00020016274	GTPBP10	89	54.286	Canis_lupus_dingo
ENSCING00000012641	-	98	53.693	ENSCHIG00000019551	GTPBP10	88	53.693	Capra_hircus
ENSCING00000012641	-	95	54.839	ENSTSYG00000008399	GTPBP10	83	59.155	Carlito_syrichta
ENSCING00000012641	-	96	51.603	ENSCAPG00000005690	GTPBP10	92	62.162	Cavia_aperea
ENSCING00000012641	-	98	53.846	ENSCPOG00000003608	GTPBP10	94	59.375	Cavia_porcellus
ENSCING00000012641	-	98	53.107	ENSCCAG00000025362	GTPBP10	88	53.107	Cebus_capucinus
ENSCING00000012641	-	98	53.125	ENSCATG00000012178	GTPBP10	88	53.125	Cercocebus_atys
ENSCING00000012641	-	98	54.286	ENSCLAG00000006695	GTPBP10	94	57.812	Chinchilla_lanigera
ENSCING00000012641	-	98	53.125	ENSCSAG00000012493	GTPBP10	88	53.125	Chlorocebus_sabaeus
ENSCING00000012641	-	96	52.478	ENSCHOG00000000392	GTPBP10	94	52.478	Choloepus_hoffmanni
ENSCING00000012641	-	100	72.576	ENSCSAVG00000011258	-	87	79.412	Ciona_savignyi
ENSCING00000012641	-	98	53.125	ENSCANG00000034809	GTPBP10	88	53.125	Colobus_angolensis_palliatus
ENSCING00000012641	-	96	53.061	ENSCGRG00001000101	Gtpbp10	92	52.571	Cricetulus_griseus_chok1gshd
ENSCING00000012641	-	96	53.061	ENSCGRG00000003724	Gtpbp10	90	58.974	Cricetulus_griseus_crigri
ENSCING00000012641	-	100	50.681	ENSCSEG00000001830	gtpbp10	92	50.820	Cynoglossus_semilaevis
ENSCING00000012641	-	99	52.381	ENSCVAG00000001795	gtpbp10	89	52.528	Cyprinodon_variegatus
ENSCING00000012641	-	100	51.667	ENSDARG00000040300	gtpbp10	91	51.667	Danio_rerio
ENSCING00000012641	-	98	52.273	ENSDNOG00000041099	GTPBP10	89	52.273	Dasypus_novemcinctus
ENSCING00000012641	-	56	63.107	ENSDORG00000015471	Gtpbp10	89	63.107	Dipodomys_ordii
ENSCING00000012641	-	96	45.821	FBgn0032818	CG10628	87	45.821	Drosophila_melanogaster
ENSCING00000012641	-	99	49.718	ENSETEG00000010827	GTPBP10	89	49.718	Echinops_telfairi
ENSCING00000012641	-	98	54.571	ENSEASG00005019630	GTPBP10	88	54.571	Equus_asinus_asinus
ENSCING00000012641	-	98	54.286	ENSECAG00000017416	GTPBP10	88	54.286	Equus_caballus
ENSCING00000012641	-	98	50.000	ENSEEUG00000002135	GTPBP10	88	50.000	Erinaceus_europaeus
ENSCING00000012641	-	99	50.420	ENSELUG00000010662	gtpbp10	91	50.420	Esox_lucius
ENSCING00000012641	-	98	54.261	ENSFCAG00000019336	GTPBP10	88	54.571	Felis_catus
ENSCING00000012641	-	91	54.294	ENSFALG00000007709	GTPBP10	91	54.294	Ficedula_albicollis
ENSCING00000012641	-	98	54.986	ENSFDAG00000011617	GTPBP10	92	63.333	Fukomys_damarensis
ENSCING00000012641	-	100	52.078	ENSFHEG00000018435	gtpbp10	94	52.078	Fundulus_heteroclitus
ENSCING00000012641	-	96	49.565	ENSGMOG00000008039	gtpbp10	94	49.709	Gadus_morhua
ENSCING00000012641	-	97	56.322	ENSGALG00000009035	GTPBP10	88	55.977	Gallus_gallus
ENSCING00000012641	-	99	49.721	ENSGAFG00000015123	gtpbp10	89	49.860	Gambusia_affinis
ENSCING00000012641	-	99	51.541	ENSGACG00000012277	gtpbp10	95	63.750	Gasterosteus_aculeatus
ENSCING00000012641	-	99	55.899	ENSGAGG00000021223	GTPBP10	94	55.587	Gopherus_agassizii
ENSCING00000012641	-	98	53.409	ENSGGOG00000034985	GTPBP10	88	53.409	Gorilla_gorilla
ENSCING00000012641	-	99	50.279	ENSHBUG00000004852	gtpbp10	93	50.279	Haplochromis_burtoni
ENSCING00000012641	-	98	54.131	ENSHGLG00000014579	GTPBP10	95	59.375	Heterocephalus_glaber_female
ENSCING00000012641	-	98	54.131	ENSHGLG00100013616	GTPBP10	88	53.977	Heterocephalus_glaber_male
ENSCING00000012641	-	98	51.420	ENSHCOG00000007155	gtpbp10	94	50.980	Hippocampus_comes
ENSCING00000012641	-	100	49.441	ENSIPUG00000003080	gtpbp10	90	49.441	Ictalurus_punctatus
ENSCING00000012641	-	98	53.714	ENSSTOG00000008220	GTPBP10	91	60.000	Ictidomys_tridecemlineatus
ENSCING00000012641	-	98	52.857	ENSJJAG00000020189	Gtpbp10	90	59.829	Jaculus_jaculus
ENSCING00000012641	-	99	49.721	ENSKMAG00000003426	gtpbp10	92	49.721	Kryptolebias_marmoratus
ENSCING00000012641	-	99	49.721	ENSLBEG00000006127	gtpbp10	93	49.721	Labrus_bergylta
ENSCING00000012641	-	100	51.397	ENSLACG00000015237	GTPBP10	93	51.397	Latimeria_chalumnae
ENSCING00000012641	-	100	51.381	ENSLOCG00000010313	gtpbp10	93	51.381	Lepisosteus_oculatus
ENSCING00000012641	-	98	55.524	ENSLAFG00000009945	GTPBP10	93	55.524	Loxodonta_africana
ENSCING00000012641	-	98	53.125	ENSMFAG00000020045	GTPBP10	98	53.869	Macaca_fascicularis
ENSCING00000012641	-	98	53.125	ENSMMUG00000023656	GTPBP10	89	55.502	Macaca_mulatta
ENSCING00000012641	-	98	53.125	ENSMNEG00000044506	GTPBP10	88	53.125	Macaca_nemestrina
ENSCING00000012641	-	98	52.841	ENSMLEG00000036303	GTPBP10	88	52.841	Mandrillus_leucophaeus
ENSCING00000012641	-	100	50.546	ENSMAMG00000013099	gtpbp10	93	50.276	Mastacembelus_armatus
ENSCING00000012641	-	99	50.279	ENSMZEG00005022457	gtpbp10	93	50.279	Maylandia_zebra
ENSCING00000012641	-	68	56.967	ENSMGAG00000008512	GTPBP10	85	56.967	Meleagris_gallopavo
ENSCING00000012641	-	96	52.907	ENSMAUG00000012555	Gtpbp10	90	58.974	Mesocricetus_auratus
ENSCING00000012641	-	100	54.190	ENSMICG00000010172	GTPBP10	89	54.494	Microcebus_murinus
ENSCING00000012641	-	97	51.862	ENSMOCG00000017168	Gtpbp10	90	58.974	Microtus_ochrogaster
ENSCING00000012641	-	92	51.360	ENSMMOG00000003534	gtpbp10	93	50.588	Mola_mola
ENSCING00000012641	-	98	54.237	ENSMODG00000010453	GTPBP10	89	54.237	Monodelphis_domestica
ENSCING00000012641	-	99	49.584	ENSMALG00000002814	gtpbp10	84	49.020	Monopterus_albus
ENSCING00000012641	-	98	53.143	MGP_CAROLIEiJ_G0026947	Gtpbp10	95	58.621	Mus_caroli
ENSCING00000012641	-	98	52.286	ENSMUSG00000040464	Gtpbp10	90	57.759	Mus_musculus
ENSCING00000012641	-	98	53.429	MGP_PahariEiJ_G0021720	Gtpbp10	96	58.974	Mus_pahari
ENSCING00000012641	-	98	52.857	MGP_SPRETEiJ_G0027942	-	95	58.621	Mus_spretus
ENSCING00000012641	-	80	53.571	ENSMPUG00000018321	GTPBP10	87	53.571	Mustela_putorius_furo
ENSCING00000012641	-	98	53.409	ENSMLUG00000007418	-	88	53.714	Myotis_lucifugus
ENSCING00000012641	-	98	53.429	ENSNGAG00000013941	Gtpbp10	90	61.538	Nannospalax_galili
ENSCING00000012641	-	99	50.000	ENSNBRG00000006085	gtpbp10	93	50.000	Neolamprologus_brichardi
ENSCING00000012641	-	98	53.824	ENSNLEG00000015162	GTPBP10	88	53.824	Nomascus_leucogenys
ENSCING00000012641	-	96	51.009	ENSMEUG00000005934	GTPBP10	90	51.297	Notamacropus_eugenii
ENSCING00000012641	-	98	49.143	ENSOPRG00000012366	GTPBP10	88	49.143	Ochotona_princeps
ENSCING00000012641	-	94	54.464	ENSODEG00000000522	GTPBP10	95	57.812	Octodon_degus
ENSCING00000012641	-	99	50.000	ENSONIG00000006196	gtpbp10	94	50.000	Oreochromis_niloticus
ENSCING00000012641	-	98	53.125	ENSOCUG00000014847	GTPBP10	86	53.429	Oryctolagus_cuniculus
ENSCING00000012641	-	100	49.582	ENSORLG00000009408	gtpbp10	80	49.721	Oryzias_latipes
ENSCING00000012641	-	100	49.582	ENSORLG00020011083	gtpbp10	89	49.582	Oryzias_latipes_hni
ENSCING00000012641	-	100	49.304	ENSORLG00015000477	gtpbp10	95	49.304	Oryzias_latipes_hsok
ENSCING00000012641	-	100	49.861	ENSOMEG00000005980	gtpbp10	94	49.861	Oryzias_melastigma
ENSCING00000012641	-	84	57.000	ENSOGAG00000010568	GTPBP10	83	57.000	Otolemur_garnettii
ENSCING00000012641	-	98	53.258	ENSOARG00000012311	-	88	53.258	Ovis_aries
ENSCING00000012641	-	98	53.693	ENSPPAG00000027408	GTPBP10	88	53.693	Pan_paniscus
ENSCING00000012641	-	98	54.286	ENSPPRG00000005403	-	88	54.286	Panthera_pardus
ENSCING00000012641	-	98	54.000	ENSPTIG00000003183	-	88	54.000	Panthera_tigris_altaica
ENSCING00000012641	-	96	51.895	ENSPTRG00000048897	-	88	51.895	Pan_troglodytes
ENSCING00000012641	-	98	53.693	ENSPTRG00000019384	GTPBP10	88	53.693	Pan_troglodytes
ENSCING00000012641	-	98	53.125	ENSPANG00000005830	GTPBP10	88	53.125	Papio_anubis
ENSCING00000012641	-	100	49.721	ENSPKIG00000000352	gtpbp10	92	49.721	Paramormyrops_kingsleyae
ENSCING00000012641	-	95	56.047	ENSPSIG00000014996	GTPBP10	94	55.718	Pelodiscus_sinensis
ENSCING00000012641	-	94	49.854	ENSPMGG00000021473	gtpbp10	88	49.854	Periophthalmus_magnuspinnatus
ENSCING00000012641	-	97	53.582	ENSPEMG00000009263	Gtpbp10	90	58.120	Peromyscus_maniculatus_bairdii
ENSCING00000012641	-	95	47.941	ENSPMAG00000004034	gtpbp10	85	47.941	Petromyzon_marinus
ENSCING00000012641	-	99	50.696	ENSPFOG00000016036	gtpbp10	88	50.838	Poecilia_formosa
ENSCING00000012641	-	99	50.279	ENSPLAG00000011156	gtpbp10	88	50.279	Poecilia_latipinna
ENSCING00000012641	-	99	50.279	ENSPMEG00000011148	gtpbp10	88	50.420	Poecilia_mexicana
ENSCING00000012641	-	99	50.838	ENSPREG00000016393	gtpbp10	88	50.838	Poecilia_reticulata
ENSCING00000012641	-	98	53.672	ENSPPYG00000017830	GTPBP10	88	53.672	Pongo_abelii
ENSCING00000012641	-	63	57.589	ENSPCAG00000015928	GTPBP10	59	57.589	Procavia_capensis
ENSCING00000012641	-	98	54.286	ENSPCOG00000017700	GTPBP10	88	54.286	Propithecus_coquereli
ENSCING00000012641	-	98	49.432	ENSPVAG00000015211	GTPBP10	88	49.714	Pteropus_vampyrus
ENSCING00000012641	-	99	50.559	ENSPNYG00000006017	gtpbp10	93	50.559	Pundamilia_nyererei
ENSCING00000012641	-	100	49.025	ENSPNAG00000004156	gtpbp10	90	49.025	Pygocentrus_nattereri
ENSCING00000012641	-	98	54.000	ENSRNOG00000007098	Gtpbp10	92	54.000	Rattus_norvegicus
ENSCING00000012641	-	98	53.693	ENSRBIG00000020878	GTPBP10	88	53.693	Rhinopithecus_bieti
ENSCING00000012641	-	98	53.693	ENSRROG00000045602	GTPBP10	88	53.693	Rhinopithecus_roxellana
ENSCING00000012641	-	98	53.390	ENSSBOG00000034053	GTPBP10	88	53.390	Saimiri_boliviensis_boliviensis
ENSCING00000012641	-	96	52.738	ENSSHAG00000017517	GTPBP10	86	52.738	Sarcophilus_harrisii
ENSCING00000012641	-	92	51.360	ENSSFOG00015011125	gtpbp10	77	54.286	Scleropages_formosus
ENSCING00000012641	-	96	50.997	ENSSMAG00000017843	gtpbp10	94	49.727	Scophthalmus_maximus
ENSCING00000012641	-	99	50.420	ENSSDUG00000002032	gtpbp10	93	50.420	Seriola_dumerili
ENSCING00000012641	-	99	50.140	ENSSLDG00000015773	gtpbp10	93	50.140	Seriola_lalandi_dorsalis
ENSCING00000012641	-	99	54.494	ENSSPUG00000014574	GTPBP10	93	54.190	Sphenodon_punctatus
ENSCING00000012641	-	99	51.966	ENSSPAG00000003435	gtpbp10	93	51.966	Stegastes_partitus
ENSCING00000012641	-	98	54.571	ENSSSCG00000015305	-	88	54.571	Sus_scrofa
ENSCING00000012641	-	97	54.598	ENSTGUG00000001430	GTPBP10	92	54.598	Taeniopygia_guttata
ENSCING00000012641	-	99	50.980	ENSTRUG00000021373	gtpbp10	93	50.980	Takifugu_rubripes
ENSCING00000012641	-	98	43.296	ENSTNIG00000018351	gtpbp10	92	43.296	Tetraodon_nigroviridis
ENSCING00000012641	-	96	45.481	ENSTBEG00000011567	GTPBP10	89	45.481	Tupaia_belangeri
ENSCING00000012641	-	51	57.065	ENSTTRG00000004572	-	59	57.065	Tursiops_truncatus
ENSCING00000012641	-	98	53.977	ENSUAMG00000006921	GTPBP10	89	53.977	Ursus_americanus
ENSCING00000012641	-	98	53.977	ENSUMAG00000018594	GTPBP10	89	53.977	Ursus_maritimus
ENSCING00000012641	-	98	53.693	ENSVPAG00000004945	GTPBP10	88	53.693	Vicugna_pacos
ENSCING00000012641	-	78	52.857	ENSVVUG00000013675	-	84	52.857	Vulpes_vulpes
ENSCING00000012641	-	100	52.617	ENSXETG00000007436	gtpbp10	90	52.617	Xenopus_tropicalis
ENSCING00000012641	-	99	49.861	ENSXCOG00000019599	gtpbp10	89	49.861	Xiphophorus_couchianus
ENSCING00000012641	-	99	49.582	ENSXMAG00000006881	gtpbp10	89	49.582	Xiphophorus_maculatus