EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012867 (Gene tree)
Gene ID: 100184445
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3991 bases
Position: chr9:6137179-6141169
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023840	MMR_HSR1	PF01926.23	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024086	-	1625	-	ENSCINP00000023840	519 (aa)	-	F6PZD7

Gene Model

Click here to download ENSCING00000012867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012867	-	78	39.851	ENSG00000178605	GTPBP6	78	39.851	Homo_sapiens
ENSCING00000012867	-	76	39.901	ENSAPOG00000001396	gtpbp6	78	38.551	Acanthochromis_polyacanthus
ENSCING00000012867	-	82	39.261	ENSAMEG00000001958	GTPBP6	97	37.578	Ailuropoda_melanoleuca
ENSCING00000012867	-	83	38.497	ENSACIG00000001694	gtpbp6	81	38.085	Amphilophus_citrinellus
ENSCING00000012867	-	73	40.945	ENSAOCG00000014817	gtpbp6	78	38.837	Amphiprion_ocellaris
ENSCING00000012867	-	73	40.945	ENSAPEG00000017894	gtpbp6	78	38.785	Amphiprion_percula
ENSCING00000012867	-	73	41.579	ENSATEG00000012768	gtpbp6	79	39.394	Anabas_testudineus
ENSCING00000012867	-	77	40.640	ENSAPLG00000005592	GTPBP6	98	40.640	Anas_platyrhynchos
ENSCING00000012867	-	82	40.278	ENSACAG00000011834	GTPBP6	80	40.278	Anolis_carolinensis
ENSCING00000012867	-	82	38.605	ENSACLG00000002216	gtpbp6	78	38.605	Astatotilapia_calliptera
ENSCING00000012867	-	87	38.681	ENSAMXG00000012493	gtpbp6	90	38.681	Astyanax_mexicanus
ENSCING00000012867	-	77	38.480	ENSBTAG00000054315	GTPBP6	80	37.500	Bos_taurus
ENSCING00000012867	-	63	42.424	ENSCJAG00000013056	GTPBP6	92	42.424	Callithrix_jacchus
ENSCING00000012867	-	73	39.842	ENSCAFG00000010931	GTPBP6	82	38.889	Canis_familiaris
ENSCING00000012867	-	73	39.842	ENSCAFG00020010766	-	82	38.889	Canis_lupus_dingo
ENSCING00000012867	-	73	39.842	ENSCAFG00020001279	-	82	38.889	Canis_lupus_dingo
ENSCING00000012867	-	78	38.929	ENSCHIG00000000121	GTPBP6	78	38.929	Capra_hircus
ENSCING00000012867	-	73	40.314	ENSCCAG00000032874	GTPBP6	85	37.118	Cebus_capucinus
ENSCING00000012867	-	78	40.098	ENSCATG00000024945	GTPBP6	78	40.098	Cercocebus_atys
ENSCING00000012867	-	78	41.262	ENSCPBG00000007520	GTPBP6	92	38.086	Chrysemys_picta_bellii
ENSCING00000012867	-	75	64.916	ENSCSAVG00000009232	-	97	64.916	Ciona_savignyi
ENSCING00000012867	-	73	38.786	ENSCGRG00001022411	Gtpbp6	74	38.786	Cricetulus_griseus_chok1gshd
ENSCING00000012867	-	73	38.786	ENSCGRG00000007715	Gtpbp6	88	38.786	Cricetulus_griseus_crigri
ENSCING00000012867	-	84	38.688	ENSCSEG00000007271	gtpbp6	89	36.966	Cynoglossus_semilaevis
ENSCING00000012867	-	81	39.953	ENSCVAG00000015417	gtpbp6	81	39.671	Cyprinodon_variegatus
ENSCING00000012867	-	86	39.254	ENSDARG00000061091	gtpbp6	82	39.254	Danio_rerio
ENSCING00000012867	-	61	37.421	ENSDNOG00000039508	GTPBP6	82	35.864	Dasypus_novemcinctus
ENSCING00000012867	-	99	32.532	FBgn0039339	CG5116	99	32.532	Drosophila_melanogaster
ENSCING00000012867	-	77	39.651	ENSEBUG00000000404	gtpbp6	72	39.651	Eptatretus_burgeri
ENSCING00000012867	-	69	40.164	ENSEASG00005007092	-	50	38.780	Equus_asinus_asinus
ENSCING00000012867	-	73	39.740	ENSECAG00000032734	GTPBP6	82	38.129	Equus_caballus
ENSCING00000012867	-	77	40.943	ENSELUG00000016376	gtpbp6	75	39.953	Esox_lucius
ENSCING00000012867	-	78	35.784	ENSFCAG00000010310	-	82	44.928	Felis_catus
ENSCING00000012867	-	65	41.194	ENSFCAG00000013263	-	65	41.194	Felis_catus
ENSCING00000012867	-	73	42.932	ENSFALG00000004133	GTPBP6	79	42.932	Ficedula_albicollis
ENSCING00000012867	-	82	38.515	ENSFHEG00000012018	gtpbp6	81	38.515	Fundulus_heteroclitus
ENSCING00000012867	-	72	41.223	ENSGMOG00000004778	gtpbp6	92	41.223	Gadus_morhua
ENSCING00000012867	-	76	40.547	ENSGALG00000016717	GTPBP6	98	40.750	Gallus_gallus
ENSCING00000012867	-	82	38.228	ENSGAFG00000018158	gtpbp6	86	36.489	Gambusia_affinis
ENSCING00000012867	-	72	40.849	ENSGACG00000013857	gtpbp6	92	40.849	Gasterosteus_aculeatus
ENSCING00000012867	-	78	42.647	ENSGAGG00000021606	GTPBP6	76	42.647	Gopherus_agassizii
ENSCING00000012867	-	51	43.774	ENSGGOG00000002792	-	92	43.774	Gorilla_gorilla
ENSCING00000012867	-	82	38.837	ENSHBUG00000013113	gtpbp6	78	38.837	Haplochromis_burtoni
ENSCING00000012867	-	78	40.342	ENSHGLG00000000207	GTPBP6	79	40.342	Heterocephalus_glaber_female
ENSCING00000012867	-	69	42.500	ENSHGLG00100000320	GTPBP6	99	42.500	Heterocephalus_glaber_male
ENSCING00000012867	-	78	40.196	ENSIPUG00000022531	gtpbp6	74	40.196	Ictalurus_punctatus
ENSCING00000012867	-	87	38.631	ENSKMAG00000016464	gtpbp6	85	38.546	Kryptolebias_marmoratus
ENSCING00000012867	-	73	40.945	ENSLBEG00000024203	gtpbp6	79	38.837	Labrus_bergylta
ENSCING00000012867	-	81	40.662	ENSLACG00000012754	GTPBP6	75	40.471	Latimeria_chalumnae
ENSCING00000012867	-	78	40.144	ENSLOCG00000008009	gtpbp6	84	40.144	Lepisosteus_oculatus
ENSCING00000012867	-	78	39.753	ENSMFAG00000041568	GTPBP6	78	39.753	Macaca_fascicularis
ENSCING00000012867	-	78	34.474	ENSMNEG00000039609	GTPBP6	77	34.474	Macaca_nemestrina
ENSCING00000012867	-	73	42.257	ENSMAMG00000012631	gtpbp6	79	39.907	Mastacembelus_armatus
ENSCING00000012867	-	82	38.372	ENSMZEG00005002869	gtpbp6	78	38.372	Maylandia_zebra
ENSCING00000012867	-	70	42.663	ENSMGAG00000014752	GTPBP6	90	42.663	Meleagris_gallopavo
ENSCING00000012867	-	87	37.500	ENSMMOG00000005950	gtpbp6	85	37.500	Mola_mola
ENSCING00000012867	-	77	40.488	ENSMODG00000000326	GTPBP6	94	39.168	Monodelphis_domestica
ENSCING00000012867	-	80	37.619	ENSMALG00000014993	gtpbp6	78	37.383	Monopterus_albus
ENSCING00000012867	-	71	42.175	MGP_CAROLIEiJ_G0027536	Gtpbp6	72	42.175	Mus_caroli
ENSCING00000012867	-	72	42.175	ENSMUSG00000033434	Gtpbp6	72	42.175	Mus_musculus
ENSCING00000012867	-	72	41.910	MGP_SPRETEiJ_G0028534	Gtpbp6	72	41.910	Mus_spretus
ENSCING00000012867	-	72	39.733	ENSMPUG00000001536	GTPBP6	80	39.733	Mustela_putorius_furo
ENSCING00000012867	-	83	38.584	ENSNGAG00000011609	Gtpbp6	83	38.864	Nannospalax_galili
ENSCING00000012867	-	92	36.308	ENSNBRG00000017629	gtpbp6	90	36.308	Neolamprologus_brichardi
ENSCING00000012867	-	51	42.105	ENSMEUG00000001355	-	82	39.623	Notamacropus_eugenii
ENSCING00000012867	-	73	40.052	ENSODEG00000001052	GTPBP6	75	40.052	Octodon_degus
ENSCING00000012867	-	82	39.070	ENSONIG00000007330	gtpbp6	80	39.070	Oreochromis_niloticus
ENSCING00000012867	-	85	33.917	ENSOANG00000007007	-	96	33.917	Ornithorhynchus_anatinus
ENSCING00000012867	-	78	38.592	ENSOCUG00000008245	GTPBP6	79	38.592	Oryctolagus_cuniculus
ENSCING00000012867	-	87	38.462	ENSORLG00000016077	gtpbp6	85	38.462	Oryzias_latipes
ENSCING00000012867	-	87	38.462	ENSORLG00020018687	gtpbp6	85	38.462	Oryzias_latipes_hni
ENSCING00000012867	-	87	38.428	ENSORLG00015014255	gtpbp6	85	38.428	Oryzias_latipes_hsok
ENSCING00000012867	-	87	39.121	ENSOMEG00000004496	gtpbp6	85	39.121	Oryzias_melastigma
ENSCING00000012867	-	78	38.480	ENSOGAG00000011327	GTPBP6	92	38.498	Otolemur_garnettii
ENSCING00000012867	-	76	36.430	ENSOARG00000000946	GTPBP6	97	36.430	Ovis_aries
ENSCING00000012867	-	70	41.828	ENSPPAG00000028400	-	79	41.828	Pan_paniscus
ENSCING00000012867	-	78	36.957	ENSPPRG00000004932	-	79	36.957	Panthera_pardus
ENSCING00000012867	-	73	32.105	ENSPPRG00000006710	-	70	32.895	Panthera_pardus
ENSCING00000012867	-	78	39.753	ENSPTRG00000050696	GTPBP6	96	35.742	Pan_troglodytes
ENSCING00000012867	-	78	37.778	ENSPANG00000011580	GTPBP6	78	37.778	Papio_anubis
ENSCING00000012867	-	90	39.535	ENSPKIG00000022514	gtpbp6	82	39.535	Paramormyrops_kingsleyae
ENSCING00000012867	-	77	41.809	ENSPSIG00000013117	GTPBP6	99	41.809	Pelodiscus_sinensis
ENSCING00000012867	-	76	43.176	ENSPMAG00000006496	gtpbp6	98	43.176	Petromyzon_marinus
ENSCING00000012867	-	82	39.862	ENSPCIG00000016456	GTPBP6	93	37.576	Phascolarctos_cinereus
ENSCING00000012867	-	82	38.051	ENSPFOG00000015695	gtpbp6	92	41.067	Poecilia_formosa
ENSCING00000012867	-	78	38.575	ENSPLAG00000015495	gtpbp6	86	36.681	Poecilia_latipinna
ENSCING00000012867	-	82	38.462	ENSPMEG00000000859	gtpbp6	94	36.327	Poecilia_mexicana
ENSCING00000012867	-	82	38.228	ENSPREG00000017643	gtpbp6	96	36.489	Poecilia_reticulata
ENSCING00000012867	-	51	44.151	ENSPPYG00000020075	-	96	44.151	Pongo_abelii
ENSCING00000012867	-	82	38.605	ENSPNYG00000000521	gtpbp6	77	38.605	Pundamilia_nyererei
ENSCING00000012867	-	87	37.582	ENSPNAG00000002094	gtpbp6	81	37.582	Pygocentrus_nattereri
ENSCING00000012867	-	76	40.099	ENSRNOG00000048168	Gtpbp6	77	40.000	Rattus_norvegicus
ENSCING00000012867	-	76	40.099	ENSRNOG00000037426	Gtpbp6	77	40.000	Rattus_norvegicus
ENSCING00000012867	-	78	40.000	ENSRBIG00000027538	GTPBP6	78	40.000	Rhinopithecus_bieti
ENSCING00000012867	-	78	40.247	ENSRROG00000033503	GTPBP6	78	40.247	Rhinopithecus_roxellana
ENSCING00000012867	-	83	40.183	ENSSHAG00000015570	GTPBP6	85	39.121	Sarcophilus_harrisii
ENSCING00000012867	-	87	38.428	ENSSFOG00015004098	gtpbp6	79	38.428	Scleropages_formosus
ENSCING00000012867	-	86	38.581	ENSSMAG00000019520	gtpbp6	83	38.074	Scophthalmus_maximus
ENSCING00000012867	-	87	38.462	ENSSDUG00000002202	gtpbp6	82	38.462	Seriola_dumerili
ENSCING00000012867	-	87	38.901	ENSSLDG00000023633	gtpbp6	93	38.901	Seriola_lalandi_dorsalis
ENSCING00000012867	-	83	40.411	ENSSPUG00000005537	GTPBP6	83	40.411	Sphenodon_punctatus
ENSCING00000012867	-	80	39.762	ENSSPAG00000017406	gtpbp6	88	38.017	Stegastes_partitus
ENSCING00000012867	-	77	39.409	ENSSSCG00000037491	-	85	37.581	Sus_scrofa
ENSCING00000012867	-	77	39.409	ENSSSCG00000033858	-	88	38.346	Sus_scrofa
ENSCING00000012867	-	72	41.689	ENSTGUG00000010642	-	83	41.689	Taeniopygia_guttata
ENSCING00000012867	-	82	40.092	ENSTRUG00000011175	gtpbp6	82	40.092	Takifugu_rubripes
ENSCING00000012867	-	73	42.368	ENSTNIG00000010659	gtpbp6	87	42.368	Tetraodon_nigroviridis
ENSCING00000012867	-	76	39.651	ENSUMAG00000018848	GTPBP6	96	39.651	Ursus_maritimus
ENSCING00000012867	-	71	40.270	ENSVVUG00000008199	GTPBP6	83	32.482	Vulpes_vulpes
ENSCING00000012867	-	73	44.503	ENSXETG00000004125	gtpbp6	79	41.763	Xenopus_tropicalis
ENSCING00000012867	-	55	40.138	ENSXCOG00000006281	gtpbp6	62	38.608	Xiphophorus_couchianus
ENSCING00000012867	-	82	37.995	ENSXMAG00000015980	gtpbp6	96	36.292	Xiphophorus_maculatus