EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4170 bases
Position: chr1:4929185-4933354
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023861	RIG-I_C-RD	PF11648.8	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024107	-	1322	-	ENSCINP00000023861	366 (aa)	-	F6PUA9

Gene Model

Click here to download ENSCING00000012881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012881	-	86	31.790	ENSTSYG00000032842	-	80	31.776	Carlito_syrichta
ENSCING00000012881	-	86	53.651	ENSCING00000009744	-	55	53.226	Ciona_intestinalis
ENSCING00000012881	-	86	31.193	ENSEBUG00000007527	dhx58	50	31.193	Eptatretus_burgeri
ENSCING00000012881	-	86	34.663	ENSFDAG00000011958	-	59	34.769	Fukomys_damarensis
ENSCING00000012881	-	86	33.129	ENSPMAG00000009697	DDX58	54	33.129	Petromyzon_marinus
ENSCING00000012881	-	86	30.625	ENSPNYG00000010709	dhx58	53	30.625	Pundamilia_nyererei
ENSCING00000012881	-	86	31.329	ENSRROG00000035891	DHX58	51	31.329	Rhinopithecus_roxellana
ENSCING00000012881	-	86	30.247	ENSSSCG00000017416	DHX58	51	30.247	Sus_scrofa