EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012945 (Gene tree)
Gene ID: 100183429
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 555 bases
Position: chr9:5288180-5288734
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023952	Ribosomal_L12	PF00542.19	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024198	-	555	-	ENSCINP00000023952	184 (aa)	-	F6RGQ1

Gene Model

Click here to download ENSCING00000012945's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012945	-	94	44.751	ENSG00000262814	MRPL12	88	41.489	Homo_sapiens
ENSCING00000012945	-	95	43.085	ENSAPOG00000005018	mrpl12	97	43.085	Acanthochromis_polyacanthus
ENSCING00000012945	-	95	43.158	ENSACIG00000006182	mrpl12	97	42.857	Amphilophus_citrinellus
ENSCING00000012945	-	95	43.850	ENSAOCG00000003859	mrpl12	97	43.850	Amphiprion_ocellaris
ENSCING00000012945	-	95	43.850	ENSAPEG00000005897	mrpl12	97	43.850	Amphiprion_percula
ENSCING00000012945	-	95	45.455	ENSATEG00000023948	mrpl12	97	45.699	Anabas_testudineus
ENSCING00000012945	-	85	45.963	ENSACAG00000010743	MRPL12	71	44.099	Anolis_carolinensis
ENSCING00000012945	-	98	44.262	ENSANAG00000037237	-	88	44.809	Aotus_nancymaae
ENSCING00000012945	-	98	42.246	ENSANAG00000020985	-	89	39.572	Aotus_nancymaae
ENSCING00000012945	-	96	44.503	ENSACLG00000022963	mrpl12	98	42.932	Astatotilapia_calliptera
ENSCING00000012945	-	82	48.408	ENSAMXG00000032543	mrpl12	83	47.879	Astyanax_mexicanus
ENSCING00000012945	-	73	49.296	ENSBTAG00000000417	MRPL12	72	47.887	Bos_taurus
ENSCING00000012945	-	100	44.565	WBGene00012361	mrpl-12	99	44.565	Caenorhabditis_elegans
ENSCING00000012945	-	98	44.920	ENSCJAG00000001652	MRPL12	88	42.246	Callithrix_jacchus
ENSCING00000012945	-	73	48.592	ENSCHIG00000027210	MRPL12	72	47.183	Capra_hircus
ENSCING00000012945	-	73	47.887	ENSTSYG00000009746	MRPL12	72	47.183	Carlito_syrichta
ENSCING00000012945	-	73	48.252	ENSCPOG00000035389	MRPL12	72	47.552	Cavia_porcellus
ENSCING00000012945	-	98	44.920	ENSCCAG00000026887	MRPL12	88	42.246	Cebus_capucinus
ENSCING00000012945	-	73	51.408	ENSCATG00000045041	MRPL12	88	40.957	Cercocebus_atys
ENSCING00000012945	-	73	48.252	ENSCLAG00000012764	MRPL12	72	47.552	Chinchilla_lanigera
ENSCING00000012945	-	73	50.704	ENSCSAG00000002234	MRPL12	88	40.957	Chlorocebus_sabaeus
ENSCING00000012945	-	73	47.887	ENSCPBG00000011476	MRPL12	72	47.183	Chrysemys_picta_bellii
ENSCING00000012945	-	73	47.887	ENSCANG00000029130	MRPL12	88	41.489	Colobus_angolensis_palliatus
ENSCING00000012945	-	73	50.345	ENSCGRG00001005393	Mrpl12	71	46.207	Cricetulus_griseus_chok1gshd
ENSCING00000012945	-	73	50.345	ENSCGRG00000015907	Mrpl12	73	46.207	Cricetulus_griseus_crigri
ENSCING00000012945	-	82	51.613	ENSCSEG00000009238	mrpl12	79	48.387	Cynoglossus_semilaevis
ENSCING00000012945	-	95	43.915	ENSCVAG00000008710	mrpl12	97	42.857	Cyprinodon_variegatus
ENSCING00000012945	-	97	44.737	ENSDARG00000038768	mrpl12	95	44.324	Danio_rerio
ENSCING00000012945	-	73	51.799	ENSDNOG00000042484	MRPL12	71	49.640	Dasypus_novemcinctus
ENSCING00000012945	-	73	47.552	ENSDORG00000008074	Mrpl12	72	51.049	Dipodomys_ordii
ENSCING00000012945	-	94	39.773	FBgn0011787	mRpL12	96	41.011	Drosophila_melanogaster
ENSCING00000012945	-	73	48.252	ENSEASG00005005780	MRPL12	72	47.552	Equus_asinus_asinus
ENSCING00000012945	-	73	48.252	ENSECAG00000009323	MRPL12	72	47.552	Equus_caballus
ENSCING00000012945	-	97	40.860	ENSEEUG00000015613	MRPL12	88	39.247	Erinaceus_europaeus
ENSCING00000012945	-	95	45.506	ENSELUG00000010073	mrpl12	87	45.304	Esox_lucius
ENSCING00000012945	-	73	46.853	ENSFDAG00000014977	MRPL12	82	46.154	Fukomys_damarensis
ENSCING00000012945	-	75	53.846	ENSFHEG00000014518	mrpl12	77	51.049	Fundulus_heteroclitus
ENSCING00000012945	-	91	48.521	ENSGMOG00000008213	mrpl12	85	47.337	Gadus_morhua
ENSCING00000012945	-	73	53.571	ENSGALG00000045753	MRPL12	74	50.714	Gallus_gallus
ENSCING00000012945	-	95	46.809	ENSGAFG00000003529	mrpl12	89	45.213	Gambusia_affinis
ENSCING00000012945	-	90	44.910	ENSGACG00000010541	mrpl12	85	44.311	Gasterosteus_aculeatus
ENSCING00000012945	-	81	46.795	ENSGAGG00000013180	MRPL12	93	42.328	Gopherus_agassizii
ENSCING00000012945	-	94	45.304	ENSGGOG00000009356	MRPL12	88	41.489	Gorilla_gorilla
ENSCING00000012945	-	96	43.158	ENSHBUG00000004986	mrpl12	97	42.632	Haplochromis_burtoni
ENSCING00000012945	-	73	47.552	ENSHGLG00000009470	MRPL12	71	46.853	Heterocephalus_glaber_female
ENSCING00000012945	-	73	49.286	ENSHGLG00100005034	MRPL12	72	47.857	Heterocephalus_glaber_male
ENSCING00000012945	-	95	45.455	ENSHCOG00000018775	mrpl12	97	44.920	Hippocampus_comes
ENSCING00000012945	-	75	52.778	ENSIPUG00000007392	Mrpl12	79	47.059	Ictalurus_punctatus
ENSCING00000012945	-	97	42.553	ENSSTOG00000031761	MRPL12	88	42.021	Ictidomys_tridecemlineatus
ENSCING00000012945	-	73	48.252	ENSJJAG00000018729	Mrpl12	71	47.552	Jaculus_jaculus
ENSCING00000012945	-	95	42.632	ENSKMAG00000012978	mrpl12	97	42.632	Kryptolebias_marmoratus
ENSCING00000012945	-	95	46.524	ENSLBEG00000024610	mrpl12	97	46.524	Labrus_bergylta
ENSCING00000012945	-	73	46.853	ENSLAFG00000004594	MRPL12	72	46.853	Loxodonta_africana
ENSCING00000012945	-	73	50.704	ENSMFAG00000042253	MRPL12	88	40.957	Macaca_fascicularis
ENSCING00000012945	-	73	50.704	ENSMNEG00000016503	MRPL12	88	40.957	Macaca_nemestrina
ENSCING00000012945	-	73	50.704	ENSMLEG00000041715	MRPL12	88	40.957	Mandrillus_leucophaeus
ENSCING00000012945	-	75	53.147	ENSMAMG00000020677	mrpl12	73	51.748	Mastacembelus_armatus
ENSCING00000012945	-	96	44.503	ENSMZEG00005011802	mrpl12	98	42.932	Maylandia_zebra
ENSCING00000012945	-	96	44.503	ENSMZEG00005021473	mrpl12	98	42.932	Maylandia_zebra
ENSCING00000012945	-	73	50.355	ENSMAUG00000002006	Mrpl12	72	50.355	Mesocricetus_auratus
ENSCING00000012945	-	73	51.064	ENSMICG00000047418	MRPL12	72	51.064	Microcebus_murinus
ENSCING00000012945	-	73	46.897	ENSMOCG00000019919	Mrpl12	72	46.207	Microtus_ochrogaster
ENSCING00000012945	-	84	48.734	ENSMMOG00000011266	mrpl12	97	44.086	Mola_mola
ENSCING00000012945	-	73	47.518	ENSMODG00000002902	MRPL12	72	50.355	Monodelphis_domestica
ENSCING00000012945	-	93	45.405	ENSMALG00000001391	mrpl12	96	45.405	Monopterus_albus
ENSCING00000012945	-	73	49.306	MGP_CAROLIEiJ_G0017522	Mrpl12	72	45.833	Mus_caroli
ENSCING00000012945	-	73	49.306	ENSMUSG00000039640	Mrpl12	72	45.833	Mus_musculus
ENSCING00000012945	-	73	48.611	MGP_PahariEiJ_G0018648	Mrpl12	72	45.833	Mus_pahari
ENSCING00000012945	-	73	49.306	MGP_SPRETEiJ_G0018366	Mrpl12	72	45.833	Mus_spretus
ENSCING00000012945	-	73	46.259	ENSNGAG00000010189	Mrpl12	72	46.259	Nannospalax_galili
ENSCING00000012945	-	96	44.503	ENSNBRG00000020817	mrpl12	98	42.932	Neolamprologus_brichardi
ENSCING00000012945	-	98	42.553	ENSNLEG00000035133	MRPL12	88	42.021	Nomascus_leucogenys
ENSCING00000012945	-	83	36.025	ENSMEUG00000010783	-	81	43.066	Notamacropus_eugenii
ENSCING00000012945	-	73	51.049	ENSODEG00000008765	MRPL12	72	46.853	Octodon_degus
ENSCING00000012945	-	67	34.532	ENSOANG00000021537	-	99	33.094	Ornithorhynchus_anatinus
ENSCING00000012945	-	78	53.378	ENSORLG00000007092	mrpl12	76	49.324	Oryzias_latipes
ENSCING00000012945	-	78	53.378	ENSORLG00020001351	mrpl12	76	49.324	Oryzias_latipes_hni
ENSCING00000012945	-	78	53.378	ENSORLG00015012065	mrpl12	76	49.324	Oryzias_latipes_hsok
ENSCING00000012945	-	82	50.323	ENSOMEG00000006871	mrpl12	79	47.742	Oryzias_melastigma
ENSCING00000012945	-	73	47.586	ENSOGAG00000005297	MRPL12	72	45.517	Otolemur_garnettii
ENSCING00000012945	-	72	48.571	ENSOARG00000018221	MRPL12	62	47.143	Ovis_aries
ENSCING00000012945	-	94	43.094	ENSPPAG00000042009	MRPL12	88	42.021	Pan_paniscus
ENSCING00000012945	-	73	48.592	ENSPPRG00000002570	MRPL12	72	47.887	Panthera_pardus
ENSCING00000012945	-	73	49.645	ENSPTIG00000019530	MRPL12	71	50.355	Panthera_tigris_altaica
ENSCING00000012945	-	94	43.094	ENSPTRG00000043438	MRPL12	88	42.021	Pan_troglodytes
ENSCING00000012945	-	73	50.704	ENSPANG00000019331	MRPL12	88	40.957	Papio_anubis
ENSCING00000012945	-	83	51.899	ENSPKIG00000012772	mrpl12	81	49.045	Paramormyrops_kingsleyae
ENSCING00000012945	-	70	46.324	ENSPSIG00000018211	MRPL12	68	47.794	Pelodiscus_sinensis
ENSCING00000012945	-	93	49.153	ENSPMGG00000008509	mrpl12	81	48.125	Periophthalmus_magnuspinnatus
ENSCING00000012945	-	73	50.000	ENSPEMG00000005848	Mrpl12	72	50.000	Peromyscus_maniculatus_bairdii
ENSCING00000012945	-	82	46.405	ENSPMAG00000001357	mrpl12	69	48.951	Petromyzon_marinus
ENSCING00000012945	-	73	45.455	ENSPCIG00000029585	MRPL12	72	49.650	Phascolarctos_cinereus
ENSCING00000012945	-	82	47.742	ENSPFOG00000024338	mrpl12	73	50.323	Poecilia_formosa
ENSCING00000012945	-	82	47.742	ENSPLAG00000002664	mrpl12	79	50.323	Poecilia_latipinna
ENSCING00000012945	-	82	47.742	ENSPMEG00000021484	mrpl12	79	50.323	Poecilia_mexicana
ENSCING00000012945	-	82	49.032	ENSPREG00000004225	mrpl12	84	51.613	Poecilia_reticulata
ENSCING00000012945	-	98	42.021	ENSPPYG00000008744	MRPL12	88	41.489	Pongo_abelii
ENSCING00000012945	-	73	49.296	ENSPCOG00000016998	MRPL12	72	47.887	Propithecus_coquereli
ENSCING00000012945	-	73	49.296	ENSPVAG00000011002	MRPL12	72	47.887	Pteropus_vampyrus
ENSCING00000012945	-	95	46.032	ENSPNYG00000008879	mrpl12	98	43.386	Pundamilia_nyererei
ENSCING00000012945	-	82	47.436	ENSPNAG00000003320	mrpl12	80	51.282	Pygocentrus_nattereri
ENSCING00000012945	-	73	50.000	ENSRNOG00000036695	Mrpl12	52	46.528	Rattus_norvegicus
ENSCING00000012945	-	73	51.408	ENSRBIG00000029573	MRPL12	88	41.489	Rhinopithecus_bieti
ENSCING00000012945	-	73	51.408	ENSRROG00000010180	MRPL12	88	41.489	Rhinopithecus_roxellana
ENSCING00000012945	-	76	38.312	YGL068W	-	79	36.364	Saccharomyces_cerevisiae
ENSCING00000012945	-	96	45.355	ENSSBOG00000033734	MRPL12	90	42.623	Saimiri_boliviensis_boliviensis
ENSCING00000012945	-	81	51.634	ENSSFOG00015023998	mrpl12	80	48.366	Scleropages_formosus
ENSCING00000012945	-	69	56.250	ENSSFOG00015023051	mrpl12	68	56.250	Scleropages_formosus
ENSCING00000012945	-	75	53.191	ENSSMAG00000001700	mrpl12	73	49.645	Scophthalmus_maximus
ENSCING00000012945	-	75	53.846	ENSSDUG00000014547	mrpl12	76	50.350	Seriola_dumerili
ENSCING00000012945	-	95	45.213	ENSSLDG00000003829	mrpl12	97	43.085	Seriola_lalandi_dorsalis
ENSCING00000012945	-	78	50.336	ENSSPUG00000011062	MRPL12	79	50.340	Sphenodon_punctatus
ENSCING00000012945	-	95	45.503	ENSSPAG00000010692	mrpl12	97	43.386	Stegastes_partitus
ENSCING00000012945	-	73	49.296	ENSSSCG00000033148	MRPL12	72	48.592	Sus_scrofa
ENSCING00000012945	-	73	45.139	ENSTGUG00000003446	MRPL12	91	44.444	Taeniopygia_guttata
ENSCING00000012945	-	82	50.000	ENSTRUG00000021764	mrpl12	62	48.026	Takifugu_rubripes
ENSCING00000012945	-	97	45.263	ENSTNIG00000010438	mrpl12	94	45.263	Tetraodon_nigroviridis
ENSCING00000012945	-	86	47.879	ENSTBEG00000010871	MRPL12	81	45.455	Tupaia_belangeri
ENSCING00000012945	-	73	49.296	ENSTTRG00000007611	MRPL12	72	48.592	Tursiops_truncatus
ENSCING00000012945	-	73	36.022	ENSUAMG00000016771	MRPL12	77	35.484	Ursus_americanus
ENSCING00000012945	-	73	46.853	ENSUMAG00000016332	MRPL12	60	46.154	Ursus_maritimus
ENSCING00000012945	-	73	51.408	ENSVVUG00000020000	MRPL12	72	49.296	Vulpes_vulpes
ENSCING00000012945	-	82	50.968	ENSXMAG00000028444	mrpl12	97	43.386	Xiphophorus_maculatus