EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012953 (Gene tree)
Gene ID: 100187426
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 879 bases
Position: chr9:5025342-5026220
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023962	DUF1325	PF07039.11	7.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024208	-	879	-	ENSCINP00000023962	293 (aa)	-	F6RG39

Gene Model

Click here to download ENSCING00000012953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012953	-	99	61.938	ENSG00000176476	SGF29	99	61.938	Homo_sapiens
ENSCING00000012953	-	98	62.238	ENSAPOG00000007072	sgf29	99	62.238	Acanthochromis_polyacanthus
ENSCING00000012953	-	99	59.516	ENSAMEG00000015388	SGF29	99	59.516	Ailuropoda_melanoleuca
ENSCING00000012953	-	85	64.516	ENSACIG00000024432	sgf29	99	64.516	Amphilophus_citrinellus
ENSCING00000012953	-	98	62.238	ENSAOCG00000013494	sgf29	99	62.238	Amphiprion_ocellaris
ENSCING00000012953	-	89	60.536	ENSAPEG00000007284	sgf29	96	60.536	Amphiprion_percula
ENSCING00000012953	-	98	62.238	ENSATEG00000017566	sgf29	99	62.238	Anabas_testudineus
ENSCING00000012953	-	99	61.644	ENSACAG00000006595	SGF29	99	61.644	Anolis_carolinensis
ENSCING00000012953	-	99	51.903	ENSANAG00000032813	-	95	59.583	Aotus_nancymaae
ENSCING00000012953	-	99	61.938	ENSANAG00000037641	-	99	61.938	Aotus_nancymaae
ENSCING00000012953	-	100	53.584	ENSANAG00000023337	-	94	53.584	Aotus_nancymaae
ENSCING00000012953	-	96	63.345	ENSACLG00000016730	sgf29	97	63.345	Astatotilapia_calliptera
ENSCING00000012953	-	99	60.067	ENSAMXG00000003395	sgf29	99	60.067	Astyanax_mexicanus
ENSCING00000012953	-	99	61.938	ENSBTAG00000016883	SGF29	99	61.938	Bos_taurus
ENSCING00000012953	-	61	38.333	WBGene00021205	Y17G9B.8	74	38.333	Caenorhabditis_elegans
ENSCING00000012953	-	99	61.938	ENSCJAG00000006577	SGF29	99	61.938	Callithrix_jacchus
ENSCING00000012953	-	96	62.057	ENSCAFG00000017127	SGF29	92	62.057	Canis_familiaris
ENSCING00000012953	-	96	62.057	ENSCAFG00020017597	SGF29	92	62.057	Canis_lupus_dingo
ENSCING00000012953	-	99	61.938	ENSCHIG00000015325	SGF29	99	61.938	Capra_hircus
ENSCING00000012953	-	83	62.551	ENSTSYG00000003314	-	96	62.551	Carlito_syrichta
ENSCING00000012953	-	99	61.938	ENSTSYG00000025878	-	99	61.938	Carlito_syrichta
ENSCING00000012953	-	78	59.307	ENSCAPG00000000732	SGF29	90	59.307	Cavia_aperea
ENSCING00000012953	-	99	62.284	ENSCPOG00000027037	SGF29	99	62.284	Cavia_porcellus
ENSCING00000012953	-	99	61.938	ENSCCAG00000027359	-	99	61.938	Cebus_capucinus
ENSCING00000012953	-	92	49.071	ENSCCAG00000027313	-	63	49.071	Cebus_capucinus
ENSCING00000012953	-	99	61.938	ENSCATG00000034020	SGF29	99	61.938	Cercocebus_atys
ENSCING00000012953	-	99	62.284	ENSCLAG00000011510	SGF29	99	62.284	Chinchilla_lanigera
ENSCING00000012953	-	99	58.108	ENSCSAG00000006259	SGF29	99	58.108	Chlorocebus_sabaeus
ENSCING00000012953	-	86	41.897	ENSCHOG00000013831	-	99	41.897	Choloepus_hoffmanni
ENSCING00000012953	-	99	61.301	ENSCPBG00000012638	SGF29	85	61.301	Chrysemys_picta_bellii
ENSCING00000012953	-	72	90.000	ENSCSAVG00000007328	-	87	90.000	Ciona_savignyi
ENSCING00000012953	-	85	61.446	ENSCANG00000039654	SGF29	100	61.446	Colobus_angolensis_palliatus
ENSCING00000012953	-	99	58.276	ENSCGRG00001014941	-	99	58.276	Cricetulus_griseus_chok1gshd
ENSCING00000012953	-	99	61.938	ENSCGRG00001016730	-	99	61.938	Cricetulus_griseus_chok1gshd
ENSCING00000012953	-	99	61.592	ENSCGRG00000003808	Sgf29	99	61.592	Cricetulus_griseus_crigri
ENSCING00000012953	-	81	65.254	ENSCSEG00000010575	sgf29	86	64.315	Cynoglossus_semilaevis
ENSCING00000012953	-	98	61.888	ENSCVAG00000014381	sgf29	99	61.888	Cyprinodon_variegatus
ENSCING00000012953	-	99	62.284	ENSDARG00000002339	sgf29	99	62.284	Danio_rerio
ENSCING00000012953	-	99	61.938	ENSDNOG00000048338	SGF29	98	61.938	Dasypus_novemcinctus
ENSCING00000012953	-	99	62.284	ENSDORG00000007002	Sgf29	99	62.284	Dipodomys_ordii
ENSCING00000012953	-	97	43.158	FBgn0050390	Sgf29	93	43.158	Drosophila_melanogaster
ENSCING00000012953	-	99	62.069	ENSEBUG00000008631	sgf29	97	62.069	Eptatretus_burgeri
ENSCING00000012953	-	97	60.563	ENSEASG00005014751	SGF29	96	60.563	Equus_asinus_asinus
ENSCING00000012953	-	99	61.938	ENSECAG00000011445	SGF29	94	61.938	Equus_caballus
ENSCING00000012953	-	90	63.258	ENSEEUG00000008521	SGF29	99	63.258	Erinaceus_europaeus
ENSCING00000012953	-	98	61.888	ENSELUG00000023888	sgf29	99	61.888	Esox_lucius
ENSCING00000012953	-	99	61.938	ENSFCAG00000012297	SGF29	99	61.938	Felis_catus
ENSCING00000012953	-	99	62.284	ENSFDAG00000012928	SGF29	99	62.284	Fukomys_damarensis
ENSCING00000012953	-	89	60.000	ENSFHEG00000022427	sgf29	95	60.000	Fundulus_heteroclitus
ENSCING00000012953	-	99	59.310	ENSGMOG00000000328	sgf29	99	59.310	Gadus_morhua
ENSCING00000012953	-	99	60.274	ENSGALG00000020590	SGF29	99	60.274	Gallus_gallus
ENSCING00000012953	-	98	62.238	ENSGAFG00000020626	sgf29	99	62.238	Gambusia_affinis
ENSCING00000012953	-	99	59.862	ENSGACG00000015001	sgf29	99	59.862	Gasterosteus_aculeatus
ENSCING00000012953	-	99	61.301	ENSGAGG00000012655	SGF29	99	61.301	Gopherus_agassizii
ENSCING00000012953	-	99	61.592	ENSGGOG00000000807	-	99	61.592	Gorilla_gorilla
ENSCING00000012953	-	74	60.648	ENSHBUG00000013677	sgf29	87	60.648	Haplochromis_burtoni
ENSCING00000012953	-	99	62.284	ENSHGLG00000014468	SGF29	99	62.284	Heterocephalus_glaber_female
ENSCING00000012953	-	99	62.284	ENSHGLG00100000132	SGF29	99	62.284	Heterocephalus_glaber_male
ENSCING00000012953	-	98	61.538	ENSHCOG00000002018	sgf29	99	61.538	Hippocampus_comes
ENSCING00000012953	-	99	62.284	ENSIPUG00000001851	sgf29	99	62.284	Ictalurus_punctatus
ENSCING00000012953	-	99	61.938	ENSSTOG00000013258	SGF29	99	61.938	Ictidomys_tridecemlineatus
ENSCING00000012953	-	99	61.938	ENSJJAG00000009013	Sgf29	99	61.938	Jaculus_jaculus
ENSCING00000012953	-	98	62.937	ENSKMAG00000004341	sgf29	97	65.560	Kryptolebias_marmoratus
ENSCING00000012953	-	81	64.706	ENSLBEG00000006754	sgf29	95	64.706	Labrus_bergylta
ENSCING00000012953	-	83	54.545	ENSLACG00000005336	SGF29	99	54.545	Latimeria_chalumnae
ENSCING00000012953	-	99	61.938	ENSLAFG00000028439	SGF29	99	61.938	Loxodonta_africana
ENSCING00000012953	-	99	61.938	ENSMFAG00000038040	SGF29	93	68.182	Macaca_fascicularis
ENSCING00000012953	-	99	61.938	ENSMMUG00000011370	SGF29	99	61.938	Macaca_mulatta
ENSCING00000012953	-	100	61.092	ENSMNEG00000043534	SGF29	99	62.753	Macaca_nemestrina
ENSCING00000012953	-	99	61.938	ENSMLEG00000031039	SGF29	99	61.938	Mandrillus_leucophaeus
ENSCING00000012953	-	98	62.238	ENSMAMG00000017907	sgf29	99	62.238	Mastacembelus_armatus
ENSCING00000012953	-	96	63.345	ENSMZEG00005001194	sgf29	97	63.345	Maylandia_zebra
ENSCING00000012953	-	96	63.345	ENSMZEG00005002947	sgf29	97	63.345	Maylandia_zebra
ENSCING00000012953	-	99	60.274	ENSMGAG00000012201	SGF29	99	60.274	Meleagris_gallopavo
ENSCING00000012953	-	99	61.938	ENSMAUG00000011063	Sgf29	99	61.938	Mesocricetus_auratus
ENSCING00000012953	-	99	61.938	ENSMICG00000009973	SGF29	99	61.938	Microcebus_murinus
ENSCING00000012953	-	99	61.938	ENSMOCG00000021358	Sgf29	99	61.938	Microtus_ochrogaster
ENSCING00000012953	-	85	62.698	ENSMMOG00000012706	sgf29	99	62.698	Mola_mola
ENSCING00000012953	-	99	62.284	ENSMODG00000015642	SGF29	99	62.284	Monodelphis_domestica
ENSCING00000012953	-	98	62.238	ENSMALG00000000231	sgf29	95	62.238	Monopterus_albus
ENSCING00000012953	-	99	62.284	MGP_CAROLIEiJ_G0030456	Sgf29	98	67.949	Mus_caroli
ENSCING00000012953	-	99	62.284	ENSMUSG00000030714	Sgf29	98	67.949	Mus_musculus
ENSCING00000012953	-	99	62.284	MGP_PahariEiJ_G0013666	Sgf29	90	72.727	Mus_pahari
ENSCING00000012953	-	99	62.284	MGP_SPRETEiJ_G0031570	Sgf29	98	67.949	Mus_spretus
ENSCING00000012953	-	99	61.938	ENSMPUG00000012669	SGF29	99	61.938	Mustela_putorius_furo
ENSCING00000012953	-	99	61.938	ENSMLUG00000022554	SGF29	99	61.938	Myotis_lucifugus
ENSCING00000012953	-	99	62.284	ENSNGAG00000022634	Sgf29	99	62.284	Nannospalax_galili
ENSCING00000012953	-	84	65.306	ENSNBRG00000020775	sgf29	98	65.306	Neolamprologus_brichardi
ENSCING00000012953	-	92	55.556	ENSNLEG00000001604	SGF29	96	55.556	Nomascus_leucogenys
ENSCING00000012953	-	75	70.548	ENSMEUG00000006221	SGF29	75	70.548	Notamacropus_eugenii
ENSCING00000012953	-	99	61.938	ENSOPRG00000009316	SGF29	99	61.938	Ochotona_princeps
ENSCING00000012953	-	99	62.630	ENSODEG00000013702	SGF29	99	62.630	Octodon_degus
ENSCING00000012953	-	98	62.021	ENSONIG00000009377	sgf29	99	62.021	Oreochromis_niloticus
ENSCING00000012953	-	67	65.306	ENSOANG00000009696	SGF29	99	65.306	Ornithorhynchus_anatinus
ENSCING00000012953	-	91	63.158	ENSOCUG00000025361	-	99	63.158	Oryctolagus_cuniculus
ENSCING00000012953	-	82	49.583	ENSOCUG00000021684	-	98	49.583	Oryctolagus_cuniculus
ENSCING00000012953	-	98	62.238	ENSORLG00000027873	sgf29	99	62.238	Oryzias_latipes
ENSCING00000012953	-	98	62.238	ENSORLG00020020976	-	99	62.238	Oryzias_latipes_hni
ENSCING00000012953	-	98	62.238	ENSORLG00015011795	sgf29	99	62.238	Oryzias_latipes_hsok
ENSCING00000012953	-	98	62.238	ENSOMEG00000020118	sgf29	99	62.238	Oryzias_melastigma
ENSCING00000012953	-	99	59.170	ENSOGAG00000015794	-	99	59.170	Otolemur_garnettii
ENSCING00000012953	-	96	44.755	ENSOGAG00000034571	-	96	44.755	Otolemur_garnettii
ENSCING00000012953	-	99	61.938	ENSOARG00000003226	SGF29	99	61.938	Ovis_aries
ENSCING00000012953	-	96	62.278	ENSPPAG00000039380	SGF29	97	64.435	Pan_paniscus
ENSCING00000012953	-	99	61.938	ENSPPRG00000006831	SGF29	99	61.938	Panthera_pardus
ENSCING00000012953	-	99	61.938	ENSPTIG00000014381	SGF29	99	61.938	Panthera_tigris_altaica
ENSCING00000012953	-	99	46.488	ENSPTRG00000007925	SGF29	98	47.797	Pan_troglodytes
ENSCING00000012953	-	99	61.938	ENSPANG00000019684	SGF29	99	61.938	Papio_anubis
ENSCING00000012953	-	99	57.785	ENSPKIG00000018503	sgf29	99	57.785	Paramormyrops_kingsleyae
ENSCING00000012953	-	98	58.741	ENSPMGG00000006683	sgf29	98	58.741	Periophthalmus_magnuspinnatus
ENSCING00000012953	-	99	61.938	ENSPCIG00000025200	SGF29	99	61.938	Phascolarctos_cinereus
ENSCING00000012953	-	98	62.238	ENSPFOG00000010035	sgf29	98	62.238	Poecilia_formosa
ENSCING00000012953	-	98	62.238	ENSPLAG00000000559	sgf29	99	62.238	Poecilia_latipinna
ENSCING00000012953	-	98	62.238	ENSPMEG00000007026	sgf29	99	62.238	Poecilia_mexicana
ENSCING00000012953	-	98	62.238	ENSPREG00000011868	sgf29	99	62.238	Poecilia_reticulata
ENSCING00000012953	-	99	61.938	ENSPPYG00000007233	SGF29	99	61.938	Pongo_abelii
ENSCING00000012953	-	99	61.938	ENSPCOG00000028233	SGF29	99	61.938	Propithecus_coquereli
ENSCING00000012953	-	84	65.306	ENSPNYG00000012353	sgf29	98	65.306	Pundamilia_nyererei
ENSCING00000012953	-	85	64.516	ENSPNAG00000014651	sgf29	99	64.516	Pygocentrus_nattereri
ENSCING00000012953	-	99	62.284	ENSRNOG00000019245	Sgf29	99	62.284	Rattus_norvegicus
ENSCING00000012953	-	99	61.938	ENSRBIG00000041003	SGF29	99	61.938	Rhinopithecus_bieti
ENSCING00000012953	-	99	61.938	ENSRROG00000044894	SGF29	99	61.938	Rhinopithecus_roxellana
ENSCING00000012953	-	89	63.740	ENSSBOG00000008004	SGF29	98	64.898	Saimiri_boliviensis_boliviensis
ENSCING00000012953	-	81	45.339	ENSSHAG00000002930	-	99	45.339	Sarcophilus_harrisii
ENSCING00000012953	-	99	61.938	ENSSHAG00000011279	-	99	61.938	Sarcophilus_harrisii
ENSCING00000012953	-	99	57.439	ENSSFOG00015001254	sgf29	99	57.439	Scleropages_formosus
ENSCING00000012953	-	98	62.587	ENSSMAG00000016613	sgf29	99	62.587	Scophthalmus_maximus
ENSCING00000012953	-	98	62.238	ENSSDUG00000005977	sgf29	99	62.238	Seriola_dumerili
ENSCING00000012953	-	98	62.238	ENSSLDG00000012446	sgf29	99	62.238	Seriola_lalandi_dorsalis
ENSCING00000012953	-	99	61.301	ENSSPUG00000010121	SGF29	99	61.301	Sphenodon_punctatus
ENSCING00000012953	-	98	62.238	ENSSPAG00000018994	sgf29	99	62.238	Stegastes_partitus
ENSCING00000012953	-	99	61.938	ENSSSCG00000022778	SGF29	99	61.938	Sus_scrofa
ENSCING00000012953	-	95	62.230	ENSTNIG00000006496	SGF29	99	62.230	Tetraodon_nigroviridis
ENSCING00000012953	-	98	61.538	ENSTNIG00000001984	sgf29	98	61.538	Tetraodon_nigroviridis
ENSCING00000012953	-	97	61.404	ENSUAMG00000010172	SGF29	84	63.396	Ursus_americanus
ENSCING00000012953	-	87	64.062	ENSUMAG00000010966	SGF29	79	64.062	Ursus_maritimus
ENSCING00000012953	-	99	62.284	ENSXETG00000033185	sgf29	99	62.284	Xenopus_tropicalis
ENSCING00000012953	-	97	62.676	ENSXCOG00000011501	sgf29	98	62.676	Xiphophorus_couchianus
ENSCING00000012953	-	98	62.238	ENSXMAG00000010932	sgf29	99	62.238	Xiphophorus_maculatus