EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000012960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1217 bases
Position: chr9:4960465-4961681
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023970	Methyltransf_31	PF13847.6	3e-12	1	1
ENSCINP00000023970	Methyltransf_8	PF05148.15	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024216	-	822	-	ENSCINP00000023970	274 (aa)	-	F6RBS2

Gene Model

Click here to download ENSCING00000012960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000012960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000012960	-	99	34.432	ENSAPOG00000015421	zgc:162396	99	34.432	Acanthochromis_polyacanthus
ENSCING00000012960	-	99	32.482	ENSACIG00000015427	zgc:162396	99	32.482	Amphilophus_citrinellus
ENSCING00000012960	-	99	33.088	ENSAOCG00000004131	zgc:162396	99	33.088	Amphiprion_ocellaris
ENSCING00000012960	-	99	33.456	ENSAPEG00000008189	zgc:162396	99	33.456	Amphiprion_percula
ENSCING00000012960	-	99	32.482	ENSATEG00000011813	zgc:162396	97	32.482	Anabas_testudineus
ENSCING00000012960	-	82	31.718	ENSAPLG00000012593	-	83	31.718	Anas_platyrhynchos
ENSCING00000012960	-	99	32.841	ENSACLG00000006906	zgc:162396	99	32.841	Astatotilapia_calliptera
ENSCING00000012960	-	99	33.579	ENSAMXG00000030552	zgc:162396	99	33.579	Astyanax_mexicanus
ENSCING00000012960	-	93	33.163	ENSCPBG00000002804	-	92	30.488	Chrysemys_picta_bellii
ENSCING00000012960	-	68	31.959	ENSCING00000014393	-	81	31.959	Ciona_intestinalis
ENSCING00000012960	-	99	32.353	ENSCVAG00000021429	zgc:162396	99	32.353	Cyprinodon_variegatus
ENSCING00000012960	-	99	32.103	ENSDARG00000069549	zgc:162396	99	32.103	Danio_rerio
ENSCING00000012960	-	99	31.734	ENSELUG00000005372	zgc:162396	99	31.734	Esox_lucius
ENSCING00000012960	-	89	33.065	ENSFALG00000012826	-	90	33.065	Ficedula_albicollis
ENSCING00000012960	-	99	33.088	ENSFHEG00000005224	-	99	33.088	Fundulus_heteroclitus
ENSCING00000012960	-	82	31.718	ENSGALG00000050548	-	82	31.718	Gallus_gallus
ENSCING00000012960	-	82	31.718	ENSGALG00000047535	-	82	31.718	Gallus_gallus
ENSCING00000012960	-	82	31.718	ENSGALG00000042073	-	82	31.718	Gallus_gallus
ENSCING00000012960	-	99	33.824	ENSGAFG00000018387	-	99	33.824	Gambusia_affinis
ENSCING00000012960	-	99	32.472	ENSGACG00000002200	zgc:162396	95	32.472	Gasterosteus_aculeatus
ENSCING00000012960	-	99	32.472	ENSHBUG00000017584	zgc:162396	99	32.472	Haplochromis_burtoni
ENSCING00000012960	-	99	32.971	ENSIPUG00000001213	-	99	32.971	Ictalurus_punctatus
ENSCING00000012960	-	99	32.472	ENSIPUG00000001159	zgc:162396	99	32.472	Ictalurus_punctatus
ENSCING00000012960	-	99	32.727	ENSIPUG00000001171	-	99	32.727	Ictalurus_punctatus
ENSCING00000012960	-	99	33.574	ENSKMAG00000018426	-	99	33.574	Kryptolebias_marmoratus
ENSCING00000012960	-	99	32.472	ENSLBEG00000026502	zgc:162396	99	32.472	Labrus_bergylta
ENSCING00000012960	-	99	33.948	ENSMAMG00000013213	zgc:162396	99	33.948	Mastacembelus_armatus
ENSCING00000012960	-	99	32.841	ENSMZEG00005000798	zgc:162396	99	32.841	Maylandia_zebra
ENSCING00000012960	-	82	30.000	ENSMGAG00000003269	-	82	30.000	Meleagris_gallopavo
ENSCING00000012960	-	99	30.403	ENSMMOG00000005445	zgc:162396	99	30.403	Mola_mola
ENSCING00000012960	-	99	32.472	ENSNBRG00000014954	zgc:162396	99	32.472	Neolamprologus_brichardi
ENSCING00000012960	-	99	32.841	ENSONIG00000004463	zgc:162396	99	32.841	Oreochromis_niloticus
ENSCING00000012960	-	91	30.800	ENSOANG00000021828	-	89	30.800	Ornithorhynchus_anatinus
ENSCING00000012960	-	51	42.446	ENSORLG00000018107	zgc:162396	80	42.446	Oryzias_latipes
ENSCING00000012960	-	99	35.897	ENSORLG00015008543	zgc:162396	99	35.897	Oryzias_latipes_hsok
ENSCING00000012960	-	99	35.165	ENSOMEG00000010640	zgc:162396	99	35.165	Oryzias_melastigma
ENSCING00000012960	-	99	30.909	ENSPKIG00000014798	zgc:162396	99	30.909	Paramormyrops_kingsleyae
ENSCING00000012960	-	66	32.778	ENSPMAG00000006166	zgc:162396	89	32.778	Petromyzon_marinus
ENSCING00000012960	-	83	33.624	ENSPMAG00000003743	zgc:162396	92	33.624	Petromyzon_marinus
ENSCING00000012960	-	66	33.333	ENSPMAG00000004744	zgc:162396	77	33.333	Petromyzon_marinus
ENSCING00000012960	-	99	34.559	ENSPFOG00000002666	zgc:162396	99	34.559	Poecilia_formosa
ENSCING00000012960	-	99	34.559	ENSPLAG00000010281	zgc:162396	99	34.559	Poecilia_latipinna
ENSCING00000012960	-	99	34.191	ENSPMEG00000002349	zgc:162396	99	34.191	Poecilia_mexicana
ENSCING00000012960	-	99	33.456	ENSPREG00000016491	zgc:162396	99	33.456	Poecilia_reticulata
ENSCING00000012960	-	99	32.841	ENSPNYG00000009858	zgc:162396	99	32.841	Pundamilia_nyererei
ENSCING00000012960	-	99	32.103	ENSPNAG00000026074	zgc:162396	99	32.103	Pygocentrus_nattereri
ENSCING00000012960	-	99	33.579	ENSPNAG00000004920	zgc:162396	99	33.579	Pygocentrus_nattereri
ENSCING00000012960	-	99	32.103	ENSSFOG00015023495	zgc:162396	99	32.103	Scleropages_formosus
ENSCING00000012960	-	99	31.365	ENSSFOG00015023503	zgc:162396	99	31.365	Scleropages_formosus
ENSCING00000012960	-	99	31.734	ENSSMAG00000004484	zgc:162396	99	31.734	Scophthalmus_maximus
ENSCING00000012960	-	99	30.996	ENSSDUG00000010278	zgc:162396	99	30.996	Seriola_dumerili
ENSCING00000012960	-	99	31.734	ENSSLDG00000021423	zgc:162396	99	31.734	Seriola_lalandi_dorsalis
ENSCING00000012960	-	82	34.348	ENSSPUG00000015532	-	70	34.348	Sphenodon_punctatus
ENSCING00000012960	-	99	35.036	ENSSPAG00000005505	zgc:162396	99	35.036	Stegastes_partitus
ENSCING00000012960	-	99	30.882	ENSTRUG00000010648	-	98	30.882	Takifugu_rubripes
ENSCING00000012960	-	99	32.847	ENSTRUG00000007506	zgc:162396	100	32.847	Takifugu_rubripes
ENSCING00000012960	-	99	31.408	ENSTNIG00000001485	zgc:162396	99	31.408	Tetraodon_nigroviridis
ENSCING00000012960	-	99	32.721	ENSXCOG00000014529	zgc:162396	99	32.721	Xiphophorus_couchianus
ENSCING00000012960	-	99	33.088	ENSXMAG00000023129	zgc:162396	99	33.088	Xiphophorus_maculatus