EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000013216 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
7340 bases
Position
chr8:3746605-3753944
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000024343MA3PF02847.179.7e-4112
ENSCINP00000024343MA3PF02847.179.7e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000024589-1927-ENSCINP00000024343467 (aa)-F6V5K2
Gene Model
Click here to download ENSCING00000013216's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013216's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000013216-9141.190ENSG00000150593PDCD49441.475Homo_sapiens
ENSCING00000013216-8844.286ENSAPOG00000018171pdcd4a9444.524Acanthochromis_polyacanthus
ENSCING00000013216-9343.508ENSAPOG00000011195pdcd4b9243.508Acanthochromis_polyacanthus
ENSCING00000013216-9142.045ENSAMEG00000015646PDCD49242.334Ailuropoda_melanoleuca
ENSCING00000013216-9343.964ENSACIG00000016432pdcd4b9343.964Amphilophus_citrinellus
ENSCING00000013216-8843.437ENSACIG00000020573pdcd4a9144.019Amphilophus_citrinellus
ENSCING00000013216-8844.524ENSAOCG00000005375pdcd4a9443.317Amphiprion_ocellaris
ENSCING00000013216-9343.736ENSAOCG00000018427pdcd4b9243.736Amphiprion_ocellaris
ENSCING00000013216-9343.736ENSAPEG00000005735pdcd4b9243.736Amphiprion_percula
ENSCING00000013216-8844.524ENSAPEG00000015119pdcd4a9044.762Amphiprion_percula
ENSCING00000013216-8843.885ENSATEG00000016227pdcd4a8844.578Anabas_testudineus
ENSCING00000013216-8942.317ENSATEG00000008734pdcd4b9042.317Anabas_testudineus
ENSCING00000013216-9641.866ENSAPLG00000003137PDCD49642.140Anas_platyrhynchos
ENSCING00000013216-8846.024ENSACAG00000000420-9544.737Anolis_carolinensis
ENSCING00000013216-9642.609ENSACAG00000015761PDCD49742.609Anolis_carolinensis
ENSCING00000013216-9142.141ENSANAG00000031719PDCD49442.431Aotus_nancymaae
ENSCING00000013216-8945.154ENSACLG00000025687pdcd4b8845.154Astatotilapia_calliptera
ENSCING00000013216-8844.286ENSACLG00000021040pdcd4a9044.498Astatotilapia_calliptera
ENSCING00000013216-8942.019ENSAMXG00000004515pdcd4b8942.317Astyanax_mexicanus
ENSCING00000013216-8844.391ENSAMXG00000030253pdcd4a8844.391Astyanax_mexicanus
ENSCING00000013216-9141.230ENSBTAG00000019434PDCD49441.514Bos_taurus
ENSCING00000013216-9141.913ENSCJAG00000018795PDCD49442.202Callithrix_jacchus
ENSCING00000013216-9141.950ENSCAFG00000010807PDCD49242.237Canis_familiaris
ENSCING00000013216-9142.141ENSCAFG00020011940PDCD49242.431Canis_lupus_dingo
ENSCING00000013216-9141.230ENSCHIG00000022248PDCD49241.514Capra_hircus
ENSCING00000013216-9142.141ENSTSYG00000014536PDCD49642.431Carlito_syrichta
ENSCING00000013216-9139.679ENSCAPG00000014937PDCD49239.679Cavia_aperea
ENSCING00000013216-8942.890ENSCPOG00000007956PDCD49242.890Cavia_porcellus
ENSCING00000013216-9142.369ENSCCAG00000031181PDCD49442.661Cebus_capucinus
ENSCING00000013216-9142.141ENSCATG00000034630PDCD49542.431Cercocebus_atys
ENSCING00000013216-8943.155ENSCLAG00000001136PDCD49243.151Chinchilla_lanigera
ENSCING00000013216-9142.369ENSCSAG00000005152PDCD49242.661Chlorocebus_sabaeus
ENSCING00000013216-9133.030ENSCHOG00000007638PDCD49231.900Choloepus_hoffmanni
ENSCING00000013216-9142.334ENSCPBG00000012844PDCD49342.273Chrysemys_picta_bellii
ENSCING00000013216-9144.186ENSCPBG00000024450-9242.956Chrysemys_picta_bellii
ENSCING00000013216-9381.522ENSCSAVG00000005003-10081.522Ciona_savignyi
ENSCING00000013216-9142.141ENSCANG00000027874PDCD49442.431Colobus_angolensis_palliatus
ENSCING00000013216-9142.141ENSCGRG00001007322Pdcd49242.431Cricetulus_griseus_chok1gshd
ENSCING00000013216-9142.141ENSCGRG00000017491Pdcd49542.431Cricetulus_griseus_crigri
ENSCING00000013216-8843.198ENSCSEG00000002907pdcd4a8844.019Cynoglossus_semilaevis
ENSCING00000013216-9445.270ENSCSEG00000012126pdcd4b9445.270Cynoglossus_semilaevis
ENSCING00000013216-7044.411ENSCVAG00000003035pdcd4a8842.518Cyprinodon_variegatus
ENSCING00000013216-8944.836ENSCVAG00000021740pdcd4b8944.836Cyprinodon_variegatus
ENSCING00000013216-8743.204ENSDARG00000021702pdcd4a8843.614Danio_rerio
ENSCING00000013216-9042.022ENSDARG00000041022pdcd4b9242.308Danio_rerio
ENSCING00000013216-9142.273ENSDNOG00000009494PDCD49242.563Dasypus_novemcinctus
ENSCING00000013216-9142.369ENSDORG00000002615Pdcd49542.237Dipodomys_ordii
ENSCING00000013216-7037.500FBgn0030520Pdcd46637.500Drosophila_melanogaster
ENSCING00000013216-9138.761ENSETEG00000013056PDCD49239.220Echinops_telfairi
ENSCING00000013216-8140.838ENSEBUG00000009505pdcd4a9738.673Eptatretus_burgeri
ENSCING00000013216-9142.141ENSEASG00005014903PDCD49242.431Equus_asinus_asinus
ENSCING00000013216-9142.141ENSECAG00000020935PDCD49242.431Equus_caballus
ENSCING00000013216-5940.000ENSEEUG00000011674-6040.000Erinaceus_europaeus
ENSCING00000013216-7847.154ENSELUG00000024343pdcd4a9345.673Esox_lucius
ENSCING00000013216-8943.662ENSELUG00000022960pdcd4b8943.560Esox_lucius
ENSCING00000013216-9142.369ENSFCAG00000011894PDCD49442.661Felis_catus
ENSCING00000013216-9641.739ENSFALG00000002279PDCD49642.424Ficedula_albicollis
ENSCING00000013216-8943.590ENSFDAG00000000911PDCD49243.119Fukomys_damarensis
ENSCING00000013216-8745.763ENSFHEG00000013043pdcd4b9442.516Fundulus_heteroclitus
ENSCING00000013216-7044.713ENSFHEG00000021625pdcd4a8844.819Fundulus_heteroclitus
ENSCING00000013216-9044.393ENSGMOG00000014693pdcd4b8944.393Gadus_morhua
ENSCING00000013216-8742.959ENSGMOG00000017926pdcd4a9043.405Gadus_morhua
ENSCING00000013216-5743.284ENSGALG00000049949-6942.975Gallus_gallus
ENSCING00000013216-9142.664ENSGALG00000008700PDCD49442.539Gallus_gallus
ENSCING00000013216-9543.805ENSGAFG00000016780pdcd4b8343.709Gambusia_affinis
ENSCING00000013216-7044.713ENSGAFG00000005779pdcd4a8844.737Gambusia_affinis
ENSCING00000013216-9242.727ENSGACG00000018691pdcd4b9243.409Gasterosteus_aculeatus
ENSCING00000013216-8744.286ENSGACG00000017601pdcd4a8844.524Gasterosteus_aculeatus
ENSCING00000013216-9142.334ENSGAGG00000011123PDCD49342.273Gopherus_agassizii
ENSCING00000013216-9640.899ENSGGOG00000025550PDCD49941.164Gorilla_gorilla
ENSCING00000013216-8844.286ENSHBUG00000010532pdcd4a9044.498Haplochromis_burtoni
ENSCING00000013216-8944.917ENSHBUG00000016801pdcd4b8844.917Haplochromis_burtoni
ENSCING00000013216-8535.396ENSHGLG00000001144-9735.468Heterocephalus_glaber_female
ENSCING00000013216-8941.686ENSHGLG00000010690-9141.244Heterocephalus_glaber_female
ENSCING00000013216-8943.590ENSHGLG00100016731PDCD49343.119Heterocephalus_glaber_male
ENSCING00000013216-8943.972ENSHCOG00000001710pdcd4b8943.972Hippocampus_comes
ENSCING00000013216-8843.373ENSHCOG00000020305pdcd4a8843.614Hippocampus_comes
ENSCING00000013216-7846.917ENSIPUG00000002299pdcd4a9742.151Ictalurus_punctatus
ENSCING00000013216-8743.675ENSIPUG00000010696pdcd4b8843.990Ictalurus_punctatus
ENSCING00000013216-9142.825ENSSTOG00000015625PDCD49243.119Ictidomys_tridecemlineatus
ENSCING00000013216-9141.419ENSJJAG00000022140Pdcd49241.705Jaculus_jaculus
ENSCING00000013216-9344.570ENSKMAG00000020343pdcd4b9244.570Kryptolebias_marmoratus
ENSCING00000013216-7845.528ENSKMAG00000001092pdcd4a8844.737Kryptolebias_marmoratus
ENSCING00000013216-8844.076ENSLBEG00000020785pdcd4a9144.286Labrus_bergylta
ENSCING00000013216-8945.154ENSLBEG00000025123pdcd4b8945.154Labrus_bergylta
ENSCING00000013216-8147.244ENSLACG00000013271PDCD49344.118Latimeria_chalumnae
ENSCING00000013216-7440.678ENSLOCG00000002395pdcd4a9841.573Lepisosteus_oculatus
ENSCING00000013216-9442.888ENSLOCG00000012312pdcd4b9543.326Lepisosteus_oculatus
ENSCING00000013216-9141.055ENSLAFG00000014885PDCD49241.339Loxodonta_africana
ENSCING00000013216-9142.141ENSMFAG00000001786PDCD49442.431Macaca_fascicularis
ENSCING00000013216-9142.141ENSMMUG00000017204PDCD49744.000Macaca_mulatta
ENSCING00000013216-9142.141ENSMNEG00000043104PDCD49442.431Macaca_nemestrina
ENSCING00000013216-9142.141ENSMLEG00000035966PDCD49442.431Mandrillus_leucophaeus
ENSCING00000013216-8843.341ENSMAMG00000016154pdcd4a8843.750Mastacembelus_armatus
ENSCING00000013216-8745.060ENSMAMG00000014502pdcd4b9744.681Mastacembelus_armatus
ENSCING00000013216-8844.286ENSMZEG00005019782pdcd4a8844.498Maylandia_zebra
ENSCING00000013216-8945.154ENSMZEG00005003005pdcd4b8845.154Maylandia_zebra
ENSCING00000013216-9142.889ENSMGAG00000010847PDCD49642.418Meleagris_gallopavo
ENSCING00000013216-9141.913ENSMAUG00000011866Pdcd49242.202Mesocricetus_auratus
ENSCING00000013216-9141.913ENSMICG00000008747PDCD49442.202Microcebus_murinus
ENSCING00000013216-9141.686ENSMOCG00000022153Pdcd49241.972Microtus_ochrogaster
ENSCING00000013216-7846.505ENSMMOG00000006425pdcd4a7745.619Mola_mola
ENSCING00000013216-8945.863ENSMMOG00000021600pdcd4b9645.863Mola_mola
ENSCING00000013216-9142.141ENSMODG00000010390PDCD49242.661Monodelphis_domestica
ENSCING00000013216-8444.304ENSMALG00000001132pdcd4b8943.990Monopterus_albus
ENSCING00000013216-8843.675ENSMALG00000001597pdcd4a9439.659Monopterus_albus
ENSCING00000013216-9142.597MGP_CAROLIEiJ_G0023076Pdcd49243.349Mus_caroli
ENSCING00000013216-9142.597ENSMUSG00000024975Pdcd49242.890Mus_musculus
ENSCING00000013216-9142.597MGP_PahariEiJ_G0014564Pdcd49242.890Mus_pahari
ENSCING00000013216-9142.597MGP_SPRETEiJ_G0023997Pdcd49242.890Mus_spretus
ENSCING00000013216-9142.141ENSMPUG00000002065PDCD49242.431Mustela_putorius_furo
ENSCING00000013216-8942.890ENSMLUG00000013798PDCD49043.192Myotis_lucifugus
ENSCING00000013216-9142.825ENSNGAG00000022282Pdcd49443.119Nannospalax_galili
ENSCING00000013216-9343.508ENSNBRG00000003325pdcd4b9243.508Neolamprologus_brichardi
ENSCING00000013216-8844.286ENSNBRG00000013163pdcd4a9344.498Neolamprologus_brichardi
ENSCING00000013216-9141.230ENSNLEG00000015556PDCD49441.514Nomascus_leucogenys
ENSCING00000013216-5945.146ENSMEUG00000001531-5845.146Notamacropus_eugenii
ENSCING00000013216-9142.141ENSOPRG00000015442PDCD49242.431Ochotona_princeps
ENSCING00000013216-8942.191ENSODEG00000009436PDCD49242.202Octodon_degus
ENSCING00000013216-9344.191ENSONIG00000016289pdcd4b9244.191Oreochromis_niloticus
ENSCING00000013216-8844.524ENSONIG00000017552pdcd4a8844.762Oreochromis_niloticus
ENSCING00000013216-8942.657ENSOANG00000001593PDCD49042.958Ornithorhynchus_anatinus
ENSCING00000013216-9141.913ENSOCUG00000016822PDCD49242.202Oryctolagus_cuniculus
ENSCING00000013216-8542.714ENSORLG00000015298pdcd4b9442.381Oryzias_latipes
ENSCING00000013216-7846.400ENSORLG00000006416pdcd4a8944.111Oryzias_latipes
ENSCING00000013216-7846.400ENSORLG00020021241pdcd4a8944.111Oryzias_latipes_hni
ENSCING00000013216-8543.719ENSORLG00020017175pdcd4b8942.958Oryzias_latipes_hni
ENSCING00000013216-7846.400ENSORLG00015021438pdcd4a8944.498Oryzias_latipes_hsok
ENSCING00000013216-8543.719ENSORLG00015017839pdcd4b8942.958Oryzias_latipes_hsok
ENSCING00000013216-7845.867ENSOMEG00000006883pdcd4a8944.550Oryzias_melastigma
ENSCING00000013216-8544.724ENSOMEG00000006923pdcd4b8844.391Oryzias_melastigma
ENSCING00000013216-9141.913ENSOGAG00000012583PDCD49242.431Otolemur_garnettii
ENSCING00000013216-9141.230ENSOARG00000010432PDCD49241.514Ovis_aries
ENSCING00000013216-9141.913ENSPPAG00000041002PDCD49442.202Pan_paniscus
ENSCING00000013216-9142.369ENSPPRG00000009147PDCD49442.661Panthera_pardus
ENSCING00000013216-9142.369ENSPTIG00000010679PDCD49442.661Panthera_tigris_altaica
ENSCING00000013216-9141.913ENSPTRG00000002940PDCD49542.202Pan_troglodytes
ENSCING00000013216-9142.141ENSPANG00000020809PDCD49542.431Papio_anubis
ENSCING00000013216-8844.952ENSPKIG00000011507pdcd4a9445.192Paramormyrops_kingsleyae
ENSCING00000013216-7847.709ENSPKIG00000017390pdcd4a9245.803Paramormyrops_kingsleyae
ENSCING00000013216-9243.052ENSPKIG00000017462pdcd4b9243.349Paramormyrops_kingsleyae
ENSCING00000013216-9341.986ENSPSIG00000010097PDCD49342.273Pelodiscus_sinensis
ENSCING00000013216-8842.308ENSPMGG00000009956pdcd4a8842.788Periophthalmus_magnuspinnatus
ENSCING00000013216-8540.594ENSPMGG00000002938pdcd4b9239.686Periophthalmus_magnuspinnatus
ENSCING00000013216-9142.141ENSPEMG00000002505Pdcd49242.431Peromyscus_maniculatus_bairdii
ENSCING00000013216-9142.141ENSPCIG00000000171PDCD49242.661Phascolarctos_cinereus
ENSCING00000013216-9343.371ENSPFOG00000005006pdcd4b9343.274Poecilia_formosa
ENSCING00000013216-7044.411ENSPFOG00000011856pdcd4a8844.258Poecilia_formosa
ENSCING00000013216-9344.118ENSPLAG00000010423pdcd4b9344.018Poecilia_latipinna
ENSCING00000013216-7044.713ENSPLAG00000015991pdcd4a8844.498Poecilia_latipinna
ENSCING00000013216-9344.191ENSPMEG00000006444pdcd4b9944.191Poecilia_mexicana
ENSCING00000013216-7044.713ENSPMEG00000018352pdcd4a8844.498Poecilia_mexicana
ENSCING00000013216-9344.344ENSPREG00000000296pdcd4b9344.244Poecilia_reticulata
ENSCING00000013216-7044.713ENSPREG00000005622pdcd4a9542.993Poecilia_reticulata
ENSCING00000013216-9341.270ENSPPYG00000002649PDCD49341.553Pongo_abelii
ENSCING00000013216-7553.333ENSPCAG00000014164PDCD47553.333Procavia_capensis
ENSCING00000013216-9141.324ENSPCOG00000021133PDCD49541.839Propithecus_coquereli
ENSCING00000013216-8942.424ENSPVAG00000016247PDCD49042.723Pteropus_vampyrus
ENSCING00000013216-8944.917ENSPNYG00000002060pdcd4b9043.873Pundamilia_nyererei
ENSCING00000013216-8844.286ENSPNYG00000009383pdcd4a8844.498Pundamilia_nyererei
ENSCING00000013216-8942.958ENSPNAG00000018427pdcd4b9939.056Pygocentrus_nattereri
ENSCING00000013216-8844.365ENSPNAG00000011656pdcd4a8844.604Pygocentrus_nattereri
ENSCING00000013216-9142.597ENSRNOG00000014779Pdcd49242.890Rattus_norvegicus
ENSCING00000013216-9140.138ENSRBIG00000036033PDCD49340.618Rhinopithecus_bieti
ENSCING00000013216-9142.141ENSRROG00000042371PDCD49442.431Rhinopithecus_roxellana
ENSCING00000013216-9142.141ENSSBOG00000026392PDCD49442.431Saimiri_boliviensis_boliviensis
ENSCING00000013216-9142.141ENSSHAG00000012060PDCD49242.661Sarcophilus_harrisii
ENSCING00000013216-9143.891ENSSFOG00015018958pdcd4a9344.118Scleropages_formosus
ENSCING00000013216-8846.763ENSSFOG00015017220pdcd4a8947.002Scleropages_formosus
ENSCING00000013216-9543.326ENSSFOG00015008116pdcd49643.326Scleropages_formosus
ENSCING00000013216-8843.602ENSSMAG00000007600pdcd4a8843.839Scophthalmus_maximus
ENSCING00000013216-9744.252ENSSMAG00000001335pdcd4b9644.252Scophthalmus_maximus
ENSCING00000013216-9344.570ENSSDUG00000010112pdcd4b9244.570Seriola_dumerili
ENSCING00000013216-8843.914ENSSDUG00000002569pdcd4a8844.630Seriola_dumerili
ENSCING00000013216-8843.914ENSSLDG00000016547pdcd4a8844.630Seriola_lalandi_dorsalis
ENSCING00000013216-9344.570ENSSLDG00000012296pdcd4b9244.570Seriola_lalandi_dorsalis
ENSCING00000013216-9139.130ENSSARG00000008245PDCD49239.401Sorex_araneus
ENSCING00000013216-9641.215ENSSPUG00000004443PDCD49641.485Sphenodon_punctatus
ENSCING00000013216-8945.154ENSSPAG00000005146pdcd4b8845.154Stegastes_partitus
ENSCING00000013216-8844.019ENSSPAG00000000564pdcd4a9044.258Stegastes_partitus
ENSCING00000013216-9141.190ENSSSCG00000010627PDCD49441.475Sus_scrofa
ENSCING00000013216-5338.462ENSTGUG00000015607-9938.911Taeniopygia_guttata
ENSCING00000013216-9641.522ENSTGUG00000010667-9642.208Taeniopygia_guttata
ENSCING00000013216-9343.820ENSTRUG00000007652pdcd4b9343.722Takifugu_rubripes
ENSCING00000013216-8844.153ENSTRUG00000002085pdcd4a9044.391Takifugu_rubripes
ENSCING00000013216-8743.780ENSTNIG00000018044pdcd4a9044.019Tetraodon_nigroviridis
ENSCING00000013216-8943.868ENSTNIG00000010581pdcd4b8943.868Tetraodon_nigroviridis
ENSCING00000013216-9139.863ENSTBEG00000000362PDCD49240.138Tupaia_belangeri
ENSCING00000013216-9140.046ENSTTRG00000006972PDCD49240.323Tursiops_truncatus
ENSCING00000013216-9142.141ENSUAMG00000024332PDCD49640.950Ursus_americanus
ENSCING00000013216-8153.333ENSUMAG00000023745PDCD48853.333Ursus_maritimus
ENSCING00000013216-9141.648ENSVPAG00000001758PDCD49241.935Vicugna_pacos
ENSCING00000013216-9142.141ENSVVUG00000007900PDCD49242.431Vulpes_vulpes
ENSCING00000013216-9740.860ENSXETG00000025248pdcd49941.075Xenopus_tropicalis
ENSCING00000013216-9344.191ENSXCOG00000014651pdcd4b9944.191Xiphophorus_couchianus
ENSCING00000013216-7945.119ENSXCOG00000011222pdcd4a9642.993Xiphophorus_couchianus
ENSCING00000013216-7044.713ENSXMAG00000005480pdcd4a8844.737Xiphophorus_maculatus
ENSCING00000013216-9344.118ENSXMAG00000006928pdcd4b9344.018Xiphophorus_maculatus

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