EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013272 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 892 bases
Position: chr8:2370105-2370996
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004592	Ribosomal_S28e	PF01200.18	6.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004592	-	507	-	ENSCINP00000004592	68 (aa)	-	F6YMZ5

Gene Model

Click here to download ENSCING00000013272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013272	-	88	90.000	ENSG00000233927	RPS28	87	90.000	Homo_sapiens
ENSCING00000013272	-	88	90.000	ENSAPOG00000015173	rps28	87	90.000	Acanthochromis_polyacanthus
ENSCING00000013272	-	88	90.000	ENSAMEG00000004917	RPS28	87	90.000	Ailuropoda_melanoleuca
ENSCING00000013272	-	88	90.000	ENSACIG00000020589	rps28	87	90.000	Amphilophus_citrinellus
ENSCING00000013272	-	88	90.000	ENSAOCG00000019080	rps28	87	90.000	Amphiprion_ocellaris
ENSCING00000013272	-	88	90.000	ENSAPEG00000015829	rps28	87	90.000	Amphiprion_percula
ENSCING00000013272	-	88	90.000	ENSATEG00000018266	rps28	87	90.000	Anabas_testudineus
ENSCING00000013272	-	60	90.244	ENSAPLG00000000915	RPS28	100	90.244	Anas_platyrhynchos
ENSCING00000013272	-	88	73.333	ENSANAG00000034851	-	85	73.333	Aotus_nancymaae
ENSCING00000013272	-	88	90.000	ENSANAG00000036427	-	87	90.000	Aotus_nancymaae
ENSCING00000013272	-	88	86.667	ENSANAG00000019522	-	87	86.667	Aotus_nancymaae
ENSCING00000013272	-	88	85.000	ENSANAG00000003228	-	87	85.000	Aotus_nancymaae
ENSCING00000013272	-	88	90.000	ENSACLG00000008061	rps28	87	90.000	Astatotilapia_calliptera
ENSCING00000013272	-	88	90.000	ENSAMXG00000042497	rps28	87	90.000	Astyanax_mexicanus
ENSCING00000013272	-	88	90.000	ENSBTAG00000002468	RPS28	87	90.000	Bos_taurus
ENSCING00000013272	-	87	86.667	WBGene00004497	rps-28	92	86.667	Caenorhabditis_elegans
ENSCING00000013272	-	79	87.037	ENSCJAG00000022371	-	53	87.037	Callithrix_jacchus
ENSCING00000013272	-	88	90.000	ENSCJAG00000010726	RPS28	87	90.000	Callithrix_jacchus
ENSCING00000013272	-	88	76.667	ENSCHIG00000007447	-	87	76.667	Capra_hircus
ENSCING00000013272	-	78	75.472	ENSCHIG00000009632	-	85	75.472	Capra_hircus
ENSCING00000013272	-	88	90.000	ENSCHIG00000017787	RPS28	87	90.000	Capra_hircus
ENSCING00000013272	-	87	63.333	ENSTSYG00000027428	-	84	63.333	Carlito_syrichta
ENSCING00000013272	-	88	90.000	ENSTSYG00000031396	-	87	90.000	Carlito_syrichta
ENSCING00000013272	-	88	90.000	ENSCPOG00000022876	RPS28	87	90.000	Cavia_porcellus
ENSCING00000013272	-	88	78.333	ENSCCAG00000016358	-	85	78.333	Cebus_capucinus
ENSCING00000013272	-	88	90.000	ENSCCAG00000030298	-	87	90.000	Cebus_capucinus
ENSCING00000013272	-	88	75.000	ENSCCAG00000029502	-	86	75.000	Cebus_capucinus
ENSCING00000013272	-	88	90.000	ENSCATG00000014458	RPS28	87	90.000	Cercocebus_atys
ENSCING00000013272	-	84	74.576	ENSCLAG00000017469	-	84	74.576	Chinchilla_lanigera
ENSCING00000013272	-	88	90.000	ENSCLAG00000002218	RPS28	87	90.000	Chinchilla_lanigera
ENSCING00000013272	-	87	89.831	ENSCSAG00000000174	-	87	89.831	Chlorocebus_sabaeus
ENSCING00000013272	-	88	90.000	ENSCPBG00000017064	RPS28	87	90.000	Chrysemys_picta_bellii
ENSCING00000013272	-	88	90.000	ENSCANG00000020391	RPS28	87	90.000	Colobus_angolensis_palliatus
ENSCING00000013272	-	88	90.000	ENSCGRG00001022084	Rps28	87	90.000	Cricetulus_griseus_chok1gshd
ENSCING00000013272	-	88	75.000	ENSCGRG00001004003	-	87	75.000	Cricetulus_griseus_chok1gshd
ENSCING00000013272	-	76	74.545	ENSCGRG00000010737	-	82	74.545	Cricetulus_griseus_crigri
ENSCING00000013272	-	88	90.000	ENSCGRG00000004955	Rps28	87	90.000	Cricetulus_griseus_crigri
ENSCING00000013272	-	88	90.000	ENSCSEG00000011735	rps28	87	90.000	Cynoglossus_semilaevis
ENSCING00000013272	-	88	90.000	ENSCVAG00000012656	rps28	87	90.000	Cyprinodon_variegatus
ENSCING00000013272	-	88	90.000	ENSDARG00000035860	rps28	87	90.000	Danio_rerio
ENSCING00000013272	-	88	90.000	ENSDNOG00000038487	-	87	90.000	Dasypus_novemcinctus
ENSCING00000013272	-	85	72.414	ENSDNOG00000044899	-	84	72.414	Dasypus_novemcinctus
ENSCING00000013272	-	65	72.727	ENSDNOG00000041203	-	68	72.727	Dasypus_novemcinctus
ENSCING00000013272	-	79	74.074	ENSDNOG00000043010	-	78	74.074	Dasypus_novemcinctus
ENSCING00000013272	-	91	77.419	ENSDNOG00000036089	-	90	77.419	Dasypus_novemcinctus
ENSCING00000013272	-	87	74.576	ENSDNOG00000043999	-	86	74.576	Dasypus_novemcinctus
ENSCING00000013272	-	88	90.000	ENSDORG00000027636	Rps28	87	90.000	Dipodomys_ordii
ENSCING00000013272	-	90	75.410	FBgn0039739	RpS28a	95	75.410	Drosophila_melanogaster
ENSCING00000013272	-	87	81.356	FBgn0030136	RpS28b	91	81.356	Drosophila_melanogaster
ENSCING00000013272	-	93	85.714	ENSEBUG00000006971	rps28	91	85.714	Eptatretus_burgeri
ENSCING00000013272	-	88	90.000	ENSEASG00005003719	RPS28	87	90.000	Equus_asinus_asinus
ENSCING00000013272	-	88	90.000	ENSECAG00000017256	RPS28	87	90.000	Equus_caballus
ENSCING00000013272	-	88	73.333	ENSEEUG00000006685	-	87	73.333	Erinaceus_europaeus
ENSCING00000013272	-	88	90.000	ENSELUG00000020168	RS28	87	90.000	Esox_lucius
ENSCING00000013272	-	88	90.000	ENSFCAG00000024931	-	87	90.000	Felis_catus
ENSCING00000013272	-	87	74.576	ENSFCAG00000040752	-	86	74.576	Felis_catus
ENSCING00000013272	-	88	90.000	ENSFDAG00000009062	RPS28	87	90.000	Fukomys_damarensis
ENSCING00000013272	-	88	90.000	ENSFHEG00000005855	rps28	87	90.000	Fundulus_heteroclitus
ENSCING00000013272	-	88	90.000	ENSGMOG00000010283	rps28	87	90.000	Gadus_morhua
ENSCING00000013272	-	88	90.000	ENSGALG00000049538	RPS28	87	90.000	Gallus_gallus
ENSCING00000013272	-	88	86.667	ENSGAFG00000012933	rps28	87	86.667	Gambusia_affinis
ENSCING00000013272	-	88	90.000	ENSGACG00000015568	rps28	87	90.000	Gasterosteus_aculeatus
ENSCING00000013272	-	65	79.545	ENSGAGG00000003977	-	67	79.545	Gopherus_agassizii
ENSCING00000013272	-	88	83.333	ENSGAGG00000004683	-	61	83.333	Gopherus_agassizii
ENSCING00000013272	-	87	88.136	ENSGAGG00000016191	-	88	88.136	Gopherus_agassizii
ENSCING00000013272	-	88	90.000	ENSGGOG00000024725	RPS28	87	90.000	Gorilla_gorilla
ENSCING00000013272	-	88	90.000	ENSHBUG00000011321	rps28	87	90.000	Haplochromis_burtoni
ENSCING00000013272	-	88	90.000	ENSHGLG00000015344	RPS28	87	90.000	Heterocephalus_glaber_female
ENSCING00000013272	-	88	78.333	ENSHGLG00100020381	-	87	78.333	Heterocephalus_glaber_male
ENSCING00000013272	-	88	90.000	ENSHGLG00100003314	RPS28	87	90.000	Heterocephalus_glaber_male
ENSCING00000013272	-	88	76.667	ENSHGLG00100019526	-	87	76.667	Heterocephalus_glaber_male
ENSCING00000013272	-	88	86.667	ENSHCOG00000005849	rps28	87	86.667	Hippocampus_comes
ENSCING00000013272	-	88	90.000	ENSIPUG00000008759	rps28	50	90.000	Ictalurus_punctatus
ENSCING00000013272	-	88	90.000	ENSSTOG00000022842	RPS28	87	90.000	Ictidomys_tridecemlineatus
ENSCING00000013272	-	88	90.000	ENSJJAG00000017384	-	87	90.000	Jaculus_jaculus
ENSCING00000013272	-	85	70.690	ENSJJAG00000012669	-	87	70.690	Jaculus_jaculus
ENSCING00000013272	-	88	71.667	ENSJJAG00000021064	-	86	71.667	Jaculus_jaculus
ENSCING00000013272	-	82	71.429	ENSJJAG00000020121	-	84	71.429	Jaculus_jaculus
ENSCING00000013272	-	88	80.000	ENSJJAG00000009096	-	87	80.000	Jaculus_jaculus
ENSCING00000013272	-	87	84.746	ENSJJAG00000010478	-	63	84.746	Jaculus_jaculus
ENSCING00000013272	-	88	90.000	ENSKMAG00000015763	rps28	87	90.000	Kryptolebias_marmoratus
ENSCING00000013272	-	65	81.818	ENSLBEG00000013549	rps28	83	81.818	Labrus_bergylta
ENSCING00000013272	-	88	90.000	ENSLOCG00000002654	rps28	73	90.000	Lepisosteus_oculatus
ENSCING00000013272	-	88	90.000	ENSLAFG00000029923	RPS28	87	90.000	Loxodonta_africana
ENSCING00000013272	-	88	86.667	ENSMFAG00000029879	-	87	86.667	Macaca_fascicularis
ENSCING00000013272	-	88	88.333	ENSMFAG00000024228	-	87	88.333	Macaca_fascicularis
ENSCING00000013272	-	88	90.000	ENSMFAG00000042430	-	87	90.000	Macaca_fascicularis
ENSCING00000013272	-	88	90.000	ENSMMUG00000028895	RPS28	87	90.000	Macaca_mulatta
ENSCING00000013272	-	88	86.667	ENSMMUG00000030827	-	87	86.667	Macaca_mulatta
ENSCING00000013272	-	88	86.667	ENSMMUG00000030258	-	87	86.667	Macaca_mulatta
ENSCING00000013272	-	88	90.000	ENSMNEG00000036447	RPS28	87	90.000	Macaca_nemestrina
ENSCING00000013272	-	88	76.667	ENSMNEG00000034123	-	85	76.667	Macaca_nemestrina
ENSCING00000013272	-	88	90.000	ENSMLEG00000036014	RPS28	87	90.000	Mandrillus_leucophaeus
ENSCING00000013272	-	88	90.000	ENSMAMG00000005811	rps28	87	90.000	Mastacembelus_armatus
ENSCING00000013272	-	88	90.000	ENSMZEG00005003997	rps28	87	90.000	Maylandia_zebra
ENSCING00000013272	-	88	90.000	ENSMAUG00000014417	Rps28	87	90.000	Mesocricetus_auratus
ENSCING00000013272	-	88	90.000	ENSMICG00000026849	RPS28	87	90.000	Microcebus_murinus
ENSCING00000013272	-	88	90.000	ENSMOCG00000007820	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	90.000	ENSMOCG00000006129	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	90.000	ENSMOCG00000008235	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	88.333	ENSMOCG00000001023	-	87	88.333	Microtus_ochrogaster
ENSCING00000013272	-	88	75.000	ENSMOCG00000007029	-	85	75.000	Microtus_ochrogaster
ENSCING00000013272	-	88	90.000	ENSMOCG00000010096	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	90.000	ENSMOCG00000018789	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	90.000	ENSMOCG00000010653	-	87	90.000	Microtus_ochrogaster
ENSCING00000013272	-	88	86.667	ENSMOCG00000002602	-	78	86.667	Microtus_ochrogaster
ENSCING00000013272	-	65	79.545	ENSMMOG00000006246	rps28	83	79.545	Mola_mola
ENSCING00000013272	-	87	83.051	ENSMODG00000025356	-	87	83.051	Monodelphis_domestica
ENSCING00000013272	-	88	90.000	ENSMODG00000003890	RPS28	87	90.000	Monodelphis_domestica
ENSCING00000013272	-	88	90.000	ENSMALG00000000781	rps28	87	90.000	Monopterus_albus
ENSCING00000013272	-	88	90.000	MGP_CAROLIEiJ_G0021418	-	100	91.071	Mus_caroli
ENSCING00000013272	-	88	90.000	ENSMUSG00000067288	Rps28	100	91.071	Mus_musculus
ENSCING00000013272	-	88	90.000	MGP_PahariEiJ_G0020423	Rps28	100	91.071	Mus_pahari
ENSCING00000013272	-	88	83.333	MGP_SPRETEiJ_G0027470	-	87	83.333	Mus_spretus
ENSCING00000013272	-	88	90.000	MGP_SPRETEiJ_G0022330	-	100	91.071	Mus_spretus
ENSCING00000013272	-	88	90.000	ENSMLUG00000023621	RPS28	87	90.000	Myotis_lucifugus
ENSCING00000013272	-	88	90.000	ENSNGAG00000010951	-	87	90.000	Nannospalax_galili
ENSCING00000013272	-	85	80.000	ENSNGAG00000015826	-	81	80.000	Nannospalax_galili
ENSCING00000013272	-	88	90.000	ENSNGAG00000000148	-	87	90.000	Nannospalax_galili
ENSCING00000013272	-	88	81.667	ENSNGAG00000011527	-	87	81.667	Nannospalax_galili
ENSCING00000013272	-	88	90.000	ENSNBRG00000001485	rps28	87	90.000	Neolamprologus_brichardi
ENSCING00000013272	-	88	88.333	ENSNLEG00000034904	-	87	88.333	Nomascus_leucogenys
ENSCING00000013272	-	82	91.071	ENSNLEG00000036113	-	100	91.071	Nomascus_leucogenys
ENSCING00000013272	-	88	88.333	ENSNLEG00000029240	-	88	88.333	Nomascus_leucogenys
ENSCING00000013272	-	88	90.000	ENSODEG00000012169	-	87	90.000	Octodon_degus
ENSCING00000013272	-	88	80.000	ENSODEG00000019037	-	87	80.000	Octodon_degus
ENSCING00000013272	-	88	90.000	ENSOCUG00000021484	RPS28	87	90.000	Oryctolagus_cuniculus
ENSCING00000013272	-	88	90.000	ENSORLG00000029846	rps28	87	90.000	Oryzias_latipes
ENSCING00000013272	-	88	90.000	ENSORLG00020022113	rps28	87	90.000	Oryzias_latipes_hni
ENSCING00000013272	-	88	90.000	ENSORLG00015005719	rps28	87	90.000	Oryzias_latipes_hsok
ENSCING00000013272	-	88	90.000	ENSOMEG00000017093	rps28	87	90.000	Oryzias_melastigma
ENSCING00000013272	-	85	70.690	ENSOGAG00000002534	-	87	70.690	Otolemur_garnettii
ENSCING00000013272	-	88	81.667	ENSOGAG00000024475	-	87	81.667	Otolemur_garnettii
ENSCING00000013272	-	88	90.000	ENSOARG00000003689	-	87	90.000	Ovis_aries
ENSCING00000013272	-	88	78.333	ENSOARG00000004121	-	87	78.333	Ovis_aries
ENSCING00000013272	-	87	74.576	ENSOARG00000013830	-	86	74.576	Ovis_aries
ENSCING00000013272	-	88	90.000	ENSPPAG00000028825	RPS28	87	90.000	Pan_paniscus
ENSCING00000013272	-	87	74.576	ENSPPRG00000016498	-	86	74.576	Panthera_pardus
ENSCING00000013272	-	88	90.000	ENSPPRG00000011146	RPS28	87	90.000	Panthera_pardus
ENSCING00000013272	-	94	70.312	ENSPTIG00000005894	-	96	70.312	Panthera_tigris_altaica
ENSCING00000013272	-	88	90.000	ENSPTRG00000040141	RPS28	87	90.000	Pan_troglodytes
ENSCING00000013272	-	88	90.000	ENSPANG00000014319	RPS28	87	90.000	Papio_anubis
ENSCING00000013272	-	65	81.818	ENSPKIG00000008060	rps28	83	81.818	Paramormyrops_kingsleyae
ENSCING00000013272	-	65	79.545	ENSPMGG00000017476	rps28	83	79.545	Periophthalmus_magnuspinnatus
ENSCING00000013272	-	88	90.000	ENSPEMG00000015848	Rps28	87	90.000	Peromyscus_maniculatus_bairdii
ENSCING00000013272	-	85	79.365	ENSPEMG00000012673	-	68	79.365	Peromyscus_maniculatus_bairdii
ENSCING00000013272	-	88	63.333	ENSPCIG00000026023	-	82	63.333	Phascolarctos_cinereus
ENSCING00000013272	-	88	90.000	ENSPCIG00000020515	RPS28	87	90.000	Phascolarctos_cinereus
ENSCING00000013272	-	87	84.746	ENSPCIG00000004578	-	76	84.746	Phascolarctos_cinereus
ENSCING00000013272	-	60	90.244	ENSPLAG00000009095	rps28	68	90.244	Poecilia_latipinna
ENSCING00000013272	-	65	81.818	ENSPMEG00000002024	rps28	64	81.818	Poecilia_mexicana
ENSCING00000013272	-	65	81.818	ENSPREG00000008776	rps28	83	81.818	Poecilia_reticulata
ENSCING00000013272	-	88	90.000	ENSPPYG00000002308	-	87	90.000	Pongo_abelii
ENSCING00000013272	-	88	75.000	ENSPPYG00000017517	-	87	75.000	Pongo_abelii
ENSCING00000013272	-	88	90.000	ENSPCOG00000018363	RPS28	87	90.000	Propithecus_coquereli
ENSCING00000013272	-	88	90.000	ENSPNYG00000003176	rps28	87	90.000	Pundamilia_nyererei
ENSCING00000013272	-	88	90.000	ENSPNAG00000023640	rps28	87	90.000	Pygocentrus_nattereri
ENSCING00000013272	-	88	90.000	ENSRNOG00000042886	Rps28	87	90.000	Rattus_norvegicus
ENSCING00000013272	-	88	86.667	ENSRNOG00000046342	LOC100359503	87	86.667	Rattus_norvegicus
ENSCING00000013272	-	87	83.051	ENSRNOG00000030242	AABR07024115.1	86	83.051	Rattus_norvegicus
ENSCING00000013272	-	88	90.000	ENSRBIG00000042335	RPS28	87	90.000	Rhinopithecus_bieti
ENSCING00000013272	-	88	90.000	ENSRROG00000009415	RPS28	87	90.000	Rhinopithecus_roxellana
ENSCING00000013272	-	93	77.778	YOR167C	RPS28A	94	77.778	Saccharomyces_cerevisiae
ENSCING00000013272	-	96	75.385	YLR264W	RPS28B	97	75.385	Saccharomyces_cerevisiae
ENSCING00000013272	-	88	90.000	ENSSBOG00000012561	-	87	90.000	Saimiri_boliviensis_boliviensis
ENSCING00000013272	-	88	88.333	ENSSBOG00000008426	-	87	88.333	Saimiri_boliviensis_boliviensis
ENSCING00000013272	-	65	81.818	ENSSFOG00015020198	rps28	83	81.818	Scleropages_formosus
ENSCING00000013272	-	88	90.000	ENSSMAG00000005687	rps28	87	90.000	Scophthalmus_maximus
ENSCING00000013272	-	65	81.818	ENSSDUG00000012719	rps28	83	81.818	Seriola_dumerili
ENSCING00000013272	-	88	90.000	ENSSLDG00000021334	rps28	87	90.000	Seriola_lalandi_dorsalis
ENSCING00000013272	-	88	81.667	ENSSARG00000006449	-	87	81.667	Sorex_araneus
ENSCING00000013272	-	88	90.000	ENSSPUG00000002186	RPS28	87	90.000	Sphenodon_punctatus
ENSCING00000013272	-	88	90.000	ENSSPAG00000000028	rps28	87	90.000	Stegastes_partitus
ENSCING00000013272	-	88	90.000	ENSSSCG00000013597	RPS28	87	90.000	Sus_scrofa
ENSCING00000013272	-	88	62.500	ENSSSCG00000037340	-	85	62.500	Sus_scrofa
ENSCING00000013272	-	75	86.275	ENSTGUG00000000095	RPS28	93	86.275	Taeniopygia_guttata
ENSCING00000013272	-	65	81.818	ENSTRUG00000009208	rps28	83	81.818	Takifugu_rubripes
ENSCING00000013272	-	88	90.000	ENSTNIG00000011061	rps28	87	90.000	Tetraodon_nigroviridis
ENSCING00000013272	-	78	75.472	ENSTBEG00000015227	-	98	75.472	Tupaia_belangeri
ENSCING00000013272	-	88	58.333	ENSUAMG00000008958	-	62	58.333	Ursus_americanus
ENSCING00000013272	-	88	90.000	ENSUAMG00000022329	-	58	90.000	Ursus_americanus
ENSCING00000013272	-	88	90.000	ENSUMAG00000014631	RPS28	87	90.000	Ursus_maritimus
ENSCING00000013272	-	88	88.333	ENSUMAG00000000588	-	87	88.333	Ursus_maritimus
ENSCING00000013272	-	88	90.000	ENSVVUG00000025217	RPS28	87	90.000	Vulpes_vulpes
ENSCING00000013272	-	88	90.000	ENSXETG00000021905	rps28p9	87	90.000	Xenopus_tropicalis
ENSCING00000013272	-	65	81.818	ENSXCOG00000007160	rps28	83	81.818	Xiphophorus_couchianus
ENSCING00000013272	-	65	81.818	ENSXMAG00000013950	rps28	83	81.818	Xiphophorus_maculatus