EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013289 (Gene tree)
Gene ID: 100178668
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L48%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1567 bases
Position: chr8:1823711-1825277
Accession: 100178668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024475	Ribosomal_S10	PF00338.22	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024721	-	784	-	ENSCINP00000024475	208 (aa)	XP_002128890	F7BLF3

Gene Model

Click here to download ENSCING00000013289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013289	-	83	34.104	ENSG00000175581	MRPL48	100	37.607	Homo_sapiens
ENSCING00000013289	-	83	37.209	ENSAPOG00000013955	mrpl48	78	37.209	Acanthochromis_polyacanthus
ENSCING00000013289	-	88	34.783	ENSAMEG00000017282	MRPL48	84	34.783	Ailuropoda_melanoleuca
ENSCING00000013289	-	95	33.333	ENSACIG00000009743	mrpl48	98	33.831	Amphilophus_citrinellus
ENSCING00000013289	-	92	37.000	ENSAOCG00000004158	mrpl48	91	37.000	Amphiprion_ocellaris
ENSCING00000013289	-	88	37.912	ENSAPEG00000024029	mrpl48	82	38.953	Amphiprion_percula
ENSCING00000013289	-	95	35.610	ENSATEG00000012425	mrpl48	97	35.610	Anabas_testudineus
ENSCING00000013289	-	85	36.932	ENSAPLG00000008046	MRPL48	82	36.932	Anas_platyrhynchos
ENSCING00000013289	-	78	38.182	ENSACAG00000006382	MRPL48	75	38.182	Anolis_carolinensis
ENSCING00000013289	-	84	34.483	ENSANAG00000036546	MRPL48	79	34.483	Aotus_nancymaae
ENSCING00000013289	-	84	34.286	ENSACLG00000024077	mrpl48	80	34.286	Astatotilapia_calliptera
ENSCING00000013289	-	83	36.628	ENSAMXG00000006784	mrpl48	87	37.356	Astyanax_mexicanus
ENSCING00000013289	-	85	35.227	ENSBTAG00000008347	MRPL48	80	35.227	Bos_taurus
ENSCING00000013289	-	85	33.523	ENSCJAG00000015867	MRPL48	80	33.523	Callithrix_jacchus
ENSCING00000013289	-	84	35.632	ENSCAFG00000005585	-	95	35.632	Canis_familiaris
ENSCING00000013289	-	85	33.708	ENSCAFG00000008462	-	82	33.708	Canis_familiaris
ENSCING00000013289	-	54	33.333	ENSCAFG00020002202	-	65	32.331	Canis_lupus_dingo
ENSCING00000013289	-	88	34.783	ENSCHIG00000013981	MRPL48	84	34.783	Capra_hircus
ENSCING00000013289	-	83	35.465	ENSTSYG00000012895	MRPL48	78	35.465	Carlito_syrichta
ENSCING00000013289	-	83	35.465	ENSCPOG00000013291	MRPL48	78	35.465	Cavia_porcellus
ENSCING00000013289	-	85	30.114	ENSCCAG00000037377	-	77	30.114	Cebus_capucinus
ENSCING00000013289	-	84	33.333	ENSCCAG00000024861	-	79	33.333	Cebus_capucinus
ENSCING00000013289	-	83	34.302	ENSCATG00000008832	MRPL48	78	34.302	Cercocebus_atys
ENSCING00000013289	-	88	35.870	ENSCLAG00000014653	MRPL48	84	35.870	Chinchilla_lanigera
ENSCING00000013289	-	85	34.091	ENSCSAG00000004059	MRPL48	80	34.091	Chlorocebus_sabaeus
ENSCING00000013289	-	100	68.421	ENSCSAVG00000006671	-	100	68.421	Ciona_savignyi
ENSCING00000013289	-	85	34.091	ENSCANG00000030769	MRPL48	80	34.091	Colobus_angolensis_palliatus
ENSCING00000013289	-	88	33.696	ENSCGRG00001021190	Mrpl48	84	33.696	Cricetulus_griseus_chok1gshd
ENSCING00000013289	-	88	33.696	ENSCGRG00000004097	Mrpl48	84	33.696	Cricetulus_griseus_crigri
ENSCING00000013289	-	85	35.227	ENSCSEG00000017376	mrpl48	81	35.227	Cynoglossus_semilaevis
ENSCING00000013289	-	83	35.838	ENSCVAG00000014692	mrpl48	80	35.838	Cyprinodon_variegatus
ENSCING00000013289	-	83	36.994	ENSDARG00000035167	mrpl48	80	35.838	Danio_rerio
ENSCING00000013289	-	83	34.302	ENSDNOG00000002177	MRPL48	94	34.302	Dasypus_novemcinctus
ENSCING00000013289	-	56	37.931	ENSDORG00000000644	-	99	37.931	Dipodomys_ordii
ENSCING00000013289	-	81	31.548	ENSETEG00000009413	MRPL48	63	31.548	Echinops_telfairi
ENSCING00000013289	-	83	34.444	ENSEBUG00000003240	mrpl48	88	34.444	Eptatretus_burgeri
ENSCING00000013289	-	84	34.483	ENSEASG00005017939	MRPL48	87	34.483	Equus_asinus_asinus
ENSCING00000013289	-	88	33.696	ENSECAG00000022115	MRPL48	84	33.696	Equus_caballus
ENSCING00000013289	-	83	37.209	ENSELUG00000008942	mrpl48	75	38.182	Esox_lucius
ENSCING00000013289	-	88	34.783	ENSFCAG00000025668	MRPL48	99	37.069	Felis_catus
ENSCING00000013289	-	83	38.372	ENSFALG00000008015	MRPL48	81	38.372	Ficedula_albicollis
ENSCING00000013289	-	85	32.955	ENSFDAG00000010990	MRPL48	80	32.955	Fukomys_damarensis
ENSCING00000013289	-	84	37.356	ENSFHEG00000020130	mrpl48	81	36.628	Fundulus_heteroclitus
ENSCING00000013289	-	80	34.940	ENSGMOG00000018272	mrpl48	93	34.940	Gadus_morhua
ENSCING00000013289	-	80	37.952	ENSGALG00000017319	MRPL48	77	37.952	Gallus_gallus
ENSCING00000013289	-	83	35.465	ENSGAFG00000004136	mrpl48	79	35.465	Gambusia_affinis
ENSCING00000013289	-	95	35.500	ENSGACG00000018902	mrpl48	94	35.500	Gasterosteus_aculeatus
ENSCING00000013289	-	96	34.500	ENSGAGG00000005045	MRPL48	87	34.500	Gopherus_agassizii
ENSCING00000013289	-	83	34.104	ENSGGOG00000022915	MRPL48	100	37.607	Gorilla_gorilla
ENSCING00000013289	-	79	31.098	ENSGGOG00000013682	-	78	31.098	Gorilla_gorilla
ENSCING00000013289	-	84	33.714	ENSHBUG00000002169	mrpl48	80	33.714	Haplochromis_burtoni
ENSCING00000013289	-	88	34.239	ENSHGLG00000006113	MRPL48	99	36.207	Heterocephalus_glaber_female
ENSCING00000013289	-	88	34.239	ENSHGLG00100014660	MRPL48	84	34.239	Heterocephalus_glaber_male
ENSCING00000013289	-	80	36.747	ENSHCOG00000013282	mrpl48	79	36.747	Hippocampus_comes
ENSCING00000013289	-	83	36.628	ENSIPUG00000021795	Mrpl48	77	37.349	Ictalurus_punctatus
ENSCING00000013289	-	85	34.659	ENSSTOG00000010694	MRPL48	80	34.659	Ictidomys_tridecemlineatus
ENSCING00000013289	-	93	34.343	ENSKMAG00000010818	mrpl48	92	34.343	Kryptolebias_marmoratus
ENSCING00000013289	-	92	34.010	ENSLBEG00000002181	mrpl48	95	34.010	Labrus_bergylta
ENSCING00000013289	-	89	30.319	ENSLACG00000004317	MRPL48	85	30.319	Latimeria_chalumnae
ENSCING00000013289	-	83	40.116	ENSLOCG00000006190	mrpl48	76	40.964	Lepisosteus_oculatus
ENSCING00000013289	-	82	35.882	ENSLAFG00000003800	MRPL48	93	35.882	Loxodonta_africana
ENSCING00000013289	-	90	32.979	ENSMFAG00000003172	MRPL48	81	34.302	Macaca_fascicularis
ENSCING00000013289	-	83	34.302	ENSMMUG00000014680	MRPL48	82	34.302	Macaca_mulatta
ENSCING00000013289	-	84	32.386	ENSMNEG00000043715	MRPL48	99	37.931	Macaca_nemestrina
ENSCING00000013289	-	83	34.302	ENSMLEG00000025711	MRPL48	78	34.302	Mandrillus_leucophaeus
ENSCING00000013289	-	84	34.857	ENSMAMG00000011802	mrpl48	83	34.706	Mastacembelus_armatus
ENSCING00000013289	-	84	34.286	ENSMZEG00005021086	mrpl48	84	34.286	Maylandia_zebra
ENSCING00000013289	-	80	35.542	ENSMGAG00000015300	MRPL48	77	35.542	Meleagris_gallopavo
ENSCING00000013289	-	88	33.696	ENSMAUG00000000711	Mrpl48	84	33.696	Mesocricetus_auratus
ENSCING00000013289	-	85	33.523	ENSMICG00000012645	-	80	33.523	Microcebus_murinus
ENSCING00000013289	-	85	33.523	ENSMICG00000028005	-	71	33.523	Microcebus_murinus
ENSCING00000013289	-	56	37.931	ENSMOCG00000013808	Mrpl48	99	37.931	Microtus_ochrogaster
ENSCING00000013289	-	56	32.759	ENSMMOG00000020651	mrpl48	98	32.759	Mola_mola
ENSCING00000013289	-	82	35.294	ENSMODG00000007576	MRPL48	77	35.294	Monodelphis_domestica
ENSCING00000013289	-	93	34.328	ENSMALG00000008851	mrpl48	91	34.328	Monopterus_albus
ENSCING00000013289	-	85	33.523	ENSMUSG00000030706	Mrpl48	100	38.095	Mus_musculus
ENSCING00000013289	-	85	34.091	MGP_PahariEiJ_G0013272	Mrpl48	81	34.091	Mus_pahari
ENSCING00000013289	-	85	34.659	MGP_SPRETEiJ_G0031161	Mrpl48	81	34.659	Mus_spretus
ENSCING00000013289	-	85	32.386	ENSMPUG00000019110	-	80	32.386	Mustela_putorius_furo
ENSCING00000013289	-	88	33.696	ENSMLUG00000012083	MRPL48	84	33.696	Myotis_lucifugus
ENSCING00000013289	-	85	34.637	ENSNGAG00000006402	Mrpl48	80	34.637	Nannospalax_galili
ENSCING00000013289	-	70	32.911	ENSNBRG00000011494	mrpl48	78	32.911	Neolamprologus_brichardi
ENSCING00000013289	-	85	34.091	ENSNLEG00000017097	MRPL48	80	34.091	Nomascus_leucogenys
ENSCING00000013289	-	83	33.140	ENSOPRG00000010373	MRPL48	89	33.140	Ochotona_princeps
ENSCING00000013289	-	84	33.908	ENSODEG00000005929	MRPL48	99	36.207	Octodon_degus
ENSCING00000013289	-	84	33.333	ENSONIG00000012529	mrpl48	80	33.702	Oreochromis_niloticus
ENSCING00000013289	-	83	36.207	ENSOANG00000013906	-	78	36.207	Ornithorhynchus_anatinus
ENSCING00000013289	-	84	33.333	ENSOCUG00000025915	-	79	33.333	Oryctolagus_cuniculus
ENSCING00000013289	-	84	33.333	ENSOCUG00000009302	-	84	33.333	Oryctolagus_cuniculus
ENSCING00000013289	-	92	34.848	ENSORLG00000008682	mrpl48	94	35.385	Oryzias_latipes
ENSCING00000013289	-	92	34.848	ENSORLG00020004801	MRPL48	94	35.385	Oryzias_latipes_hni
ENSCING00000013289	-	92	35.052	ENSORLG00015021506	mrpl48	94	35.385	Oryzias_latipes_hsok
ENSCING00000013289	-	96	33.659	ENSOMEG00000019182	mrpl48	94	34.848	Oryzias_melastigma
ENSCING00000013289	-	62	35.938	ENSOGAG00000004771	-	86	35.938	Otolemur_garnettii
ENSCING00000013289	-	84	33.333	ENSOGAG00000027978	-	79	33.333	Otolemur_garnettii
ENSCING00000013289	-	88	34.783	ENSOARG00000008118	MRPL48	84	34.783	Ovis_aries
ENSCING00000013289	-	83	34.104	ENSPPAG00000039192	MRPL48	79	34.104	Pan_paniscus
ENSCING00000013289	-	88	35.326	ENSPPRG00000008470	MRPL48	99	37.931	Panthera_pardus
ENSCING00000013289	-	88	35.326	ENSPTIG00000020025	MRPL48	99	37.931	Panthera_tigris_altaica
ENSCING00000013289	-	83	34.104	ENSPTRG00000004049	MRPL48	81	34.104	Pan_troglodytes
ENSCING00000013289	-	83	34.302	ENSPANG00000019128	MRPL48	78	34.302	Papio_anubis
ENSCING00000013289	-	57	32.203	ENSPKIG00000024210	mrpl48	100	32.203	Paramormyrops_kingsleyae
ENSCING00000013289	-	96	35.644	ENSPSIG00000014248	MRPL48	93	35.644	Pelodiscus_sinensis
ENSCING00000013289	-	65	39.130	ENSPMGG00000004557	mrpl48	81	39.231	Periophthalmus_magnuspinnatus
ENSCING00000013289	-	56	38.793	ENSPEMG00000021769	Mrpl48	99	38.793	Peromyscus_maniculatus_bairdii
ENSCING00000013289	-	83	34.884	ENSPCIG00000021813	MRPL48	63	34.884	Phascolarctos_cinereus
ENSCING00000013289	-	87	34.031	ENSPFOG00000014883	mrpl48	87	34.031	Poecilia_formosa
ENSCING00000013289	-	93	32.821	ENSPLAG00000004162	mrpl48	93	33.505	Poecilia_latipinna
ENSCING00000013289	-	83	34.884	ENSPMEG00000015944	mrpl48	79	34.884	Poecilia_mexicana
ENSCING00000013289	-	93	32.990	ENSPREG00000020427	mrpl48	89	32.990	Poecilia_reticulata
ENSCING00000013289	-	92	33.508	ENSPPYG00000003664	-	70	33.508	Pongo_abelii
ENSCING00000013289	-	85	34.659	ENSPCOG00000025047	-	80	34.659	Propithecus_coquereli
ENSCING00000013289	-	85	35.795	ENSPCOG00000020385	-	81	35.795	Propithecus_coquereli
ENSCING00000013289	-	90	35.079	ENSPNYG00000020778	mrpl48	87	35.079	Pundamilia_nyererei
ENSCING00000013289	-	90	36.170	ENSPNAG00000027512	mrpl48	78	35.028	Pygocentrus_nattereri
ENSCING00000013289	-	84	35.057	ENSRNOG00000018042	Mrpl48	80	35.057	Rattus_norvegicus
ENSCING00000013289	-	85	30.114	ENSRBIG00000030623	-	82	30.114	Rhinopithecus_bieti
ENSCING00000013289	-	85	33.523	ENSRROG00000043160	MRPL48	80	33.523	Rhinopithecus_roxellana
ENSCING00000013289	-	85	30.114	ENSRROG00000040924	-	82	30.114	Rhinopithecus_roxellana
ENSCING00000013289	-	81	37.278	ENSSHAG00000014091	MRPL48	93	37.278	Sarcophilus_harrisii
ENSCING00000013289	-	83	33.898	ENSSFOG00015002052	mrpl48	79	35.028	Scleropages_formosus
ENSCING00000013289	-	83	34.078	ENSSMAG00000015781	mrpl48	79	34.302	Scophthalmus_maximus
ENSCING00000013289	-	80	36.145	ENSSDUG00000014937	mrpl48	75	36.145	Seriola_dumerili
ENSCING00000013289	-	80	36.145	ENSSLDG00000008081	mrpl48	75	36.145	Seriola_lalandi_dorsalis
ENSCING00000013289	-	85	33.523	ENSSARG00000003792	MRPL48	66	33.523	Sorex_araneus
ENSCING00000013289	-	86	36.313	ENSSPUG00000017310	MRPL48	81	36.313	Sphenodon_punctatus
ENSCING00000013289	-	89	35.233	ENSSPAG00000012763	mrpl48	88	35.233	Stegastes_partitus
ENSCING00000013289	-	88	35.870	ENSSSCG00000014829	MRPL48	84	35.870	Sus_scrofa
ENSCING00000013289	-	83	38.372	ENSTGUG00000013469	-	95	38.372	Taeniopygia_guttata
ENSCING00000013289	-	84	34.857	ENSTRUG00000005273	mrpl48	85	34.857	Takifugu_rubripes
ENSCING00000013289	-	88	36.413	ENSTNIG00000007416	mrpl48	86	36.413	Tetraodon_nigroviridis
ENSCING00000013289	-	88	34.783	ENSTTRG00000005403	MRPL48	93	34.783	Tursiops_truncatus
ENSCING00000013289	-	88	34.239	ENSUMAG00000010317	MRPL48	84	34.239	Ursus_maritimus
ENSCING00000013289	-	88	34.239	ENSVPAG00000004657	MRPL48	93	34.239	Vicugna_pacos
ENSCING00000013289	-	66	34.058	ENSVVUG00000024543	-	99	37.069	Vulpes_vulpes
ENSCING00000013289	-	94	33.495	ENSXETG00000023199	mrpl48	96	33.495	Xenopus_tropicalis
ENSCING00000013289	-	87	35.000	ENSXCOG00000004111	mrpl48	86	35.000	Xiphophorus_couchianus
ENSCING00000013289	-	83	35.465	ENSXMAG00000011518	mrpl48	79	35.465	Xiphophorus_maculatus