EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013663 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 15327 bases
Position: chr1:4624128-4639454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024998	RRM_1	PF00076.22	1.5e-33	1	2
ENSCINP00000024998	RRM_1	PF00076.22	1.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025244	-	1195	-	ENSCINP00000024998	376 (aa)	-	F6TNN9

Gene Model

Click here to download ENSCING00000013663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013663	-	65	41.634	ENSAPOG00000003387	HNRNPA0	87	43.529	Acanthochromis_polyacanthus
ENSCING00000013663	-	53	62.000	ENSAPOG00000003688	hnrnpa3	50	67.416	Acanthochromis_polyacanthus
ENSCING00000013663	-	50	63.492	ENSAPOG00000003641	hnrnpa3	75	63.492	Acanthochromis_polyacanthus
ENSCING00000013663	-	50	64.550	ENSATEG00000015304	hnrnpa3	53	67.416	Anabas_testudineus
ENSCING00000013663	-	50	65.608	ENSACLG00000008532	hnrnpa3	90	47.557	Astatotilapia_calliptera
ENSCING00000013663	-	50	65.608	ENSAMXG00000007065	hnrnpa3	68	56.148	Astyanax_mexicanus
ENSCING00000013663	-	53	62.189	ENSCJAG00000013830	-	71	53.435	Callithrix_jacchus
ENSCING00000013663	-	51	62.295	ENSCATG00000038569	-	91	43.302	Cercocebus_atys
ENSCING00000013663	-	77	89.189	ENSCSAVG00000002994	-	71	88.050	Ciona_savignyi
ENSCING00000013663	-	50	64.550	ENSCVAG00000018995	hnrnpa3	84	48.485	Cyprinodon_variegatus
ENSCING00000013663	-	50	66.310	ENSDARG00000059351	hnrnpa3	98	56.327	Danio_rerio
ENSCING00000013663	-	53	61.194	ENSELUG00000023080	hnrnpa3	77	57.709	Esox_lucius
ENSCING00000013663	-	52	45.641	ENSFDAG00000009547	-	50	46.073	Fukomys_damarensis
ENSCING00000013663	-	52	55.155	ENSFDAG00000000331	-	85	41.325	Fukomys_damarensis
ENSCING00000013663	-	50	65.079	ENSGACG00000004477	hnrnpa3	82	55.285	Gasterosteus_aculeatus
ENSCING00000013663	-	50	65.079	ENSHBUG00000019734	hnrnpa3	90	47.231	Haplochromis_burtoni
ENSCING00000013663	-	58	46.575	ENSHBUG00000023868	HNRNPA0	83	47.418	Haplochromis_burtoni
ENSCING00000013663	-	50	62.963	ENSHGLG00100001336	-	71	51.751	Heterocephalus_glaber_male
ENSCING00000013663	-	52	65.464	ENSHGLG00100006677	-	77	51.064	Heterocephalus_glaber_male
ENSCING00000013663	-	52	64.948	ENSIPUG00000019815	RO32	85	49.662	Ictalurus_punctatus
ENSCING00000013663	-	51	52.406	ENSSTOG00000019374	-	89	37.082	Ictidomys_tridecemlineatus
ENSCING00000013663	-	51	49.738	ENSJJAG00000006954	Hnrnpa0	91	38.591	Jaculus_jaculus
ENSCING00000013663	-	50	65.079	ENSKMAG00000015973	hnrnpa3	85	49.123	Kryptolebias_marmoratus
ENSCING00000013663	-	51	64.583	ENSLBEG00000016767	hnrnpa3	54	67.403	Labrus_bergylta
ENSCING00000013663	-	50	50.000	ENSLACG00000014480	HNRNPA0	86	40.364	Latimeria_chalumnae
ENSCING00000013663	-	50	68.984	ENSLOCG00000006986	hnrnpa3	85	49.329	Lepisosteus_oculatus
ENSCING00000013663	-	50	67.456	ENSLAFG00000027712	-	54	67.273	Loxodonta_africana
ENSCING00000013663	-	51	60.656	ENSMLEG00000033415	-	91	42.679	Mandrillus_leucophaeus
ENSCING00000013663	-	53	48.515	ENSMAMG00000017754	HNRNPA0	89	45.614	Mastacembelus_armatus
ENSCING00000013663	-	50	65.608	ENSMZEG00005004663	hnrnpa3	90	47.557	Maylandia_zebra
ENSCING00000013663	-	52	59.794	ENSMODG00000024570	-	83	45.307	Monodelphis_domestica
ENSCING00000013663	-	53	62.000	ENSMALG00000009691	hnrnpa3	75	67.416	Monopterus_albus
ENSCING00000013663	-	54	61.650	ENSONIG00000008607	hnrnpa3	79	45.988	Oreochromis_niloticus
ENSCING00000013663	-	51	64.583	ENSORLG00000017561	hnrnpa3	87	48.322	Oryzias_latipes
ENSCING00000013663	-	52	63.776	ENSORLG00020020788	hnrnpa3	87	48.322	Oryzias_latipes_hni
ENSCING00000013663	-	54	40.500	ENSORLG00020022487	-	80	37.295	Oryzias_latipes_hni
ENSCING00000013663	-	51	64.583	ENSORLG00015014774	hnrnpa3	87	48.322	Oryzias_latipes_hsok
ENSCING00000013663	-	50	42.021	ENSORLG00015016507	-	89	34.106	Oryzias_latipes_hsok
ENSCING00000013663	-	51	64.583	ENSOMEG00000004838	hnrnpa3	54	67.033	Oryzias_melastigma
ENSCING00000013663	-	52	65.816	ENSPKIG00000022916	hnrnpa3	70	65.816	Paramormyrops_kingsleyae
ENSCING00000013663	-	51	64.737	ENSPMGG00000000747	hnrnpa3	77	63.975	Periophthalmus_magnuspinnatus
ENSCING00000013663	-	50	64.021	ENSPFOG00000014049	hnrnpa3	88	48.288	Poecilia_formosa
ENSCING00000013663	-	50	64.021	ENSPMEG00000006390	hnrnpa3	88	48.288	Poecilia_mexicana
ENSCING00000013663	-	50	64.171	ENSPREG00000005411	hnrnpa3	75	54.959	Poecilia_reticulata
ENSCING00000013663	-	53	64.921	ENSPNYG00000008424	hnrnpa3	87	57.759	Pundamilia_nyererei
ENSCING00000013663	-	54	65.517	ENSSFOG00015001814	hnrnpa3	70	55.985	Scleropages_formosus
ENSCING00000013663	-	54	62.255	ENSSMAG00000015218	hnrnpa3	66	54.086	Scophthalmus_maximus
ENSCING00000013663	-	50	65.079	ENSSDUG00000000381	hnrnpa3	86	52.416	Seriola_dumerili
ENSCING00000013663	-	50	64.550	ENSSPAG00000008969	hnrnpa3	87	48.276	Stegastes_partitus
ENSCING00000013663	-	51	45.833	ENSSSCG00000001098	-	75	38.989	Sus_scrofa
ENSCING00000013663	-	50	53.439	ENSSSCG00000033635	-	50	55.618	Sus_scrofa
ENSCING00000013663	-	50	53.439	ENSSSCG00000040926	-	50	55.618	Sus_scrofa
ENSCING00000013663	-	51	64.062	ENSTRUG00000017504	hnrnpa3	65	58.371	Takifugu_rubripes
ENSCING00000013663	-	53	63.000	ENSTNIG00000016958	hnrnpa3	90	48.387	Tetraodon_nigroviridis
ENSCING00000013663	-	53	51.256	ENSXETG00000003833	hnrnpa0	98	41.486	Xenopus_tropicalis
ENSCING00000013663	-	54	64.851	ENSXETG00000001806	hnrnpa3	80	50.331	Xenopus_tropicalis
ENSCING00000013663	-	50	64.021	ENSXMAG00000000439	hnrnpa3	88	48.288	Xiphophorus_maculatus