EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013736 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6826 bases
Position: chr1:2895080-2901905
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025100	zf-CCCH_2	PF14608.6	9.2e-06	1	4
ENSCINP00000025100	zf-CCCH_2	PF14608.6	9.2e-06	2	4
ENSCINP00000025100	zf-CCCH_2	PF14608.6	9.2e-06	3	4
ENSCINP00000025100	zf-CCCH_2	PF14608.6	9.2e-06	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025346	-	1567	-	ENSCINP00000025100	409 (aa)	-	F6RRB1

Gene Model

Click here to download ENSCING00000013736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013736	-	67	43.548	ENSG00000076770	MBNL3	96	33.149	Homo_sapiens
ENSCING00000013736	-	66	44.262	ENSAPOG00000023160	-	69	44.262	Acanthochromis_polyacanthus
ENSCING00000013736	-	75	44.262	ENSAPOG00000023703	mbnl1	97	40.134	Acanthochromis_polyacanthus
ENSCING00000013736	-	85	41.558	ENSAMEG00000011259	MBNL3	92	41.558	Ailuropoda_melanoleuca
ENSCING00000013736	-	68	53.731	ENSAOCG00000004789	mbnl3	69	59.574	Amphiprion_ocellaris
ENSCING00000013736	-	68	53.731	ENSAPEG00000009067	mbnl3	69	59.574	Amphiprion_percula
ENSCING00000013736	-	65	55.856	ENSATEG00000014871	mbnl3	96	42.424	Anabas_testudineus
ENSCING00000013736	-	51	72.973	ENSATEG00000014258	-	58	56.522	Anabas_testudineus
ENSCING00000013736	-	77	59.459	ENSACAG00000009557	MBNL3	71	59.459	Anolis_carolinensis
ENSCING00000013736	-	78	62.745	ENSANAG00000026531	MBNL3	73	62.745	Aotus_nancymaae
ENSCING00000013736	-	50	69.863	ENSAMXG00000010312	-	78	53.279	Astyanax_mexicanus
ENSCING00000013736	-	54	69.444	ENSAMXG00000042491	mbnl3	64	44.262	Astyanax_mexicanus
ENSCING00000013736	-	89	77.333	ENSBTAG00000014088	MBNL3	75	72.941	Bos_taurus
ENSCING00000013736	-	77	76.389	ENSBTAG00000004564	MBNL1	79	49.721	Bos_taurus
ENSCING00000013736	-	78	43.548	ENSCJAG00000004080	MBNL3	96	43.548	Callithrix_jacchus
ENSCING00000013736	-	85	43.541	ENSCAFG00000018841	MBNL3	92	43.541	Canis_familiaris
ENSCING00000013736	-	76	64.423	ENSCAFG00020000653	MBNL3	77	64.423	Canis_lupus_dingo
ENSCING00000013736	-	90	72.093	ENSCHIG00000015570	MBNL3	93	40.889	Capra_hircus
ENSCING00000013736	-	78	72.500	ENSTSYG00000014189	MBNL3	69	72.500	Carlito_syrichta
ENSCING00000013736	-	71	72.289	ENSCPOG00000008092	MBNL3	65	72.289	Cavia_porcellus
ENSCING00000013736	-	78	64.762	ENSCCAG00000033152	MBNL3	76	64.762	Cebus_capucinus
ENSCING00000013736	-	78	63.107	ENSCATG00000036303	MBNL3	76	63.107	Cercocebus_atys
ENSCING00000013736	-	79	71.951	ENSCLAG00000001223	MBNL3	68	71.951	Chinchilla_lanigera
ENSCING00000013736	-	78	43.548	ENSCSAG00000007820	MBNL3	94	43.548	Chlorocebus_sabaeus
ENSCING00000013736	-	78	76.389	ENSCPBG00000018808	MBNL1	80	56.115	Chrysemys_picta_bellii
ENSCING00000013736	-	78	63.107	ENSCANG00000040059	MBNL3	76	63.107	Colobus_angolensis_palliatus
ENSCING00000013736	-	85	73.171	ENSCGRG00001006617	Mbnl3	74	73.171	Cricetulus_griseus_chok1gshd
ENSCING00000013736	-	85	73.171	ENSCGRG00000010072	Mbnl3	74	73.171	Cricetulus_griseus_crigri
ENSCING00000013736	-	78	53.731	ENSCSEG00000005665	mbnl3	96	42.424	Cynoglossus_semilaevis
ENSCING00000013736	-	83	42.105	ENSCSEG00000015783	mbnl1	95	39.146	Cynoglossus_semilaevis
ENSCING00000013736	-	50	77.027	ENSCVAG00000020926	-	60	57.143	Cyprinodon_variegatus
ENSCING00000013736	-	58	69.333	ENSCVAG00000014252	mbnl3	78	69.333	Cyprinodon_variegatus
ENSCING00000013736	-	78	71.053	ENSDARG00000016085	mbnl3	69	71.053	Danio_rerio
ENSCING00000013736	-	75	44.262	ENSDARG00000052978	mbnl1	87	61.856	Danio_rerio
ENSCING00000013736	-	85	44.175	ENSDNOG00000016518	MBNL3	90	43.810	Dasypus_novemcinctus
ENSCING00000013736	-	86	79.730	ENSDORG00000012854	Mbnl3	78	79.730	Dipodomys_ordii
ENSCING00000013736	-	89	59.649	ENSETEG00000015907	MBNL3	77	59.649	Echinops_telfairi
ENSCING00000013736	-	65	70.423	ENSEBUG00000003843	-	57	59.000	Eptatretus_burgeri
ENSCING00000013736	-	51	60.526	ENSEBUG00000016730	-	57	60.526	Eptatretus_burgeri
ENSCING00000013736	-	56	72.840	ENSEASG00005000227	MBNL3	65	72.840	Equus_asinus_asinus
ENSCING00000013736	-	56	72.840	ENSECAG00000021076	MBNL3	61	72.840	Equus_caballus
ENSCING00000013736	-	78	71.053	ENSELUG00000009313	mbnl3	65	61.224	Esox_lucius
ENSCING00000013736	-	54	57.500	ENSELUG00000010028	MBNL1	54	57.500	Esox_lucius
ENSCING00000013736	-	78	75.000	ENSELUG00000020187	-	82	58.772	Esox_lucius
ENSCING00000013736	-	51	61.667	ENSELUG00000011545	mbnl1	95	40.000	Esox_lucius
ENSCING00000013736	-	85	42.982	ENSFCAG00000009604	MBNL3	95	42.982	Felis_catus
ENSCING00000013736	-	78	61.207	ENSFALG00000001826	MBNL3	71	61.207	Ficedula_albicollis
ENSCING00000013736	-	79	71.951	ENSFDAG00000005681	MBNL3	65	71.951	Fukomys_damarensis
ENSCING00000013736	-	74	42.623	ENSFHEG00000017992	mbnl1	96	41.392	Fundulus_heteroclitus
ENSCING00000013736	-	58	69.333	ENSFHEG00000015097	mbnl3	77	69.333	Fundulus_heteroclitus
ENSCING00000013736	-	78	73.973	ENSGMOG00000002161	mbnl2	76	63.918	Gadus_morhua
ENSCING00000013736	-	87	55.556	ENSGMOG00000002820	mbnl3	73	55.556	Gadus_morhua
ENSCING00000013736	-	77	77.632	ENSGALG00000053597	MBNL3	84	77.632	Gallus_gallus
ENSCING00000013736	-	86	49.254	ENSGAFG00000019836	mbnl3	93	41.489	Gambusia_affinis
ENSCING00000013736	-	55	60.000	ENSGAFG00000001972	-	74	50.000	Gambusia_affinis
ENSCING00000013736	-	78	61.000	ENSGACG00000017015	mbnl3	75	61.000	Gasterosteus_aculeatus
ENSCING00000013736	-	78	76.389	ENSGAGG00000016381	MBNL1	77	49.162	Gopherus_agassizii
ENSCING00000013736	-	78	61.207	ENSGAGG00000000090	MBNL3	74	60.684	Gopherus_agassizii
ENSCING00000013736	-	67	43.548	ENSGGOG00000007756	MBNL3	62	62.136	Gorilla_gorilla
ENSCING00000013736	-	83	44.706	ENSHBUG00000020020	mbnl1	92	40.625	Haplochromis_burtoni
ENSCING00000013736	-	79	71.951	ENSHGLG00000006589	MBNL3	65	71.951	Heterocephalus_glaber_female
ENSCING00000013736	-	51	56.800	ENSHGLG00000012911	MBNL1	86	47.619	Heterocephalus_glaber_female
ENSCING00000013736	-	79	71.951	ENSHGLG00100004221	MBNL3	68	71.951	Heterocephalus_glaber_male
ENSCING00000013736	-	51	56.800	ENSHGLG00100017739	MBNL1	86	47.619	Heterocephalus_glaber_male
ENSCING00000013736	-	62	61.628	ENSHCOG00000003609	mbnl3	77	62.353	Hippocampus_comes
ENSCING00000013736	-	76	63.107	ENSSTOG00000006715	MBNL3	76	63.107	Ictidomys_tridecemlineatus
ENSCING00000013736	-	86	76.829	ENSJJAG00000004793	Mbnl3	74	76.829	Jaculus_jaculus
ENSCING00000013736	-	87	40.260	ENSKMAG00000020596	mbnl1	95	39.643	Kryptolebias_marmoratus
ENSCING00000013736	-	76	44.262	ENSLBEG00000018916	-	82	44.262	Labrus_bergylta
ENSCING00000013736	-	50	50.000	ENSLBEG00000007060	mbnl3	66	50.000	Labrus_bergylta
ENSCING00000013736	-	66	76.389	ENSLACG00000016501	mbnl2	72	68.085	Latimeria_chalumnae
ENSCING00000013736	-	78	61.207	ENSLACG00000018172	MBNL3	73	61.207	Latimeria_chalumnae
ENSCING00000013736	-	78	75.000	ENSLOCG00000015065	mbnl3	94	41.791	Lepisosteus_oculatus
ENSCING00000013736	-	89	60.360	ENSLAFG00000011822	MBNL3	77	60.360	Loxodonta_africana
ENSCING00000013736	-	78	63.107	ENSMFAG00000034599	MBNL3	76	63.107	Macaca_fascicularis
ENSCING00000013736	-	78	63.107	ENSMMUG00000003071	MBNL3	76	63.107	Macaca_mulatta
ENSCING00000013736	-	78	56.452	ENSMNEG00000039160	MBNL3	94	43.548	Macaca_nemestrina
ENSCING00000013736	-	78	63.107	ENSMLEG00000028867	MBNL3	76	63.107	Mandrillus_leucophaeus
ENSCING00000013736	-	83	44.706	ENSMAMG00000011321	mbnl1	93	44.706	Mastacembelus_armatus
ENSCING00000013736	-	54	51.235	ENSMAMG00000012429	-	63	49.711	Mastacembelus_armatus
ENSCING00000013736	-	68	44.262	ENSMAMG00000012935	MBNL1	64	60.000	Mastacembelus_armatus
ENSCING00000013736	-	58	69.737	ENSMAMG00000021465	mbnl3	69	69.737	Mastacembelus_armatus
ENSCING00000013736	-	83	44.706	ENSMZEG00005020050	mbnl1	92	40.625	Maylandia_zebra
ENSCING00000013736	-	78	61.207	ENSMGAG00000003064	MBNL3	83	60.684	Meleagris_gallopavo
ENSCING00000013736	-	50	56.452	ENSMGAG00000010862	MBNL1	89	49.451	Meleagris_gallopavo
ENSCING00000013736	-	78	73.171	ENSMAUG00000000984	Mbnl3	93	48.765	Mesocricetus_auratus
ENSCING00000013736	-	50	64.423	ENSMICG00000032488	MBNL3	66	64.423	Microcebus_murinus
ENSCING00000013736	-	75	74.390	ENSMOCG00000011470	Mbnl3	77	64.762	Microtus_ochrogaster
ENSCING00000013736	-	72	71.429	ENSMMOG00000020119	-	75	71.429	Mola_mola
ENSCING00000013736	-	78	77.778	ENSMODG00000015304	MBNL3	66	77.632	Monodelphis_domestica
ENSCING00000013736	-	78	60.606	ENSMALG00000011399	mbnl3	71	60.606	Monopterus_albus
ENSCING00000013736	-	72	42.188	ENSMALG00000010192	MBNL1	75	43.529	Monopterus_albus
ENSCING00000013736	-	78	76.829	MGP_CAROLIEiJ_G0033061	Mbnl3	68	76.829	Mus_caroli
ENSCING00000013736	-	78	76.829	ENSMUSG00000036109	Mbnl3	68	76.829	Mus_musculus
ENSCING00000013736	-	78	76.829	MGP_PahariEiJ_G0031606	Mbnl3	68	76.829	Mus_pahari
ENSCING00000013736	-	78	76.829	MGP_SPRETEiJ_G0034219	Mbnl3	68	76.829	Mus_spretus
ENSCING00000013736	-	77	41.778	ENSMPUG00000002178	MBNL3	76	41.778	Mustela_putorius_furo
ENSCING00000013736	-	78	76.389	ENSMPUG00000002708	MBNL1	77	49.721	Mustela_putorius_furo
ENSCING00000013736	-	78	71.250	ENSMLUG00000016240	MBNL3	65	71.250	Myotis_lucifugus
ENSCING00000013736	-	85	76.250	ENSNGAG00000019720	Mbnl3	74	76.250	Nannospalax_galili
ENSCING00000013736	-	87	57.724	ENSNBRG00000017341	mbnl1	91	40.625	Neolamprologus_brichardi
ENSCING00000013736	-	67	43.548	ENSNLEG00000001722	MBNL3	56	72.500	Nomascus_leucogenys
ENSCING00000013736	-	78	77.778	ENSMEUG00000001183	MBNL3	75	62.385	Notamacropus_eugenii
ENSCING00000013736	-	79	71.951	ENSODEG00000011309	MBNL3	68	71.951	Octodon_degus
ENSCING00000013736	-	78	61.207	ENSOANG00000011697	MBNL3	71	61.207	Ornithorhynchus_anatinus
ENSCING00000013736	-	78	73.750	ENSOCUG00000014979	MBNL3	63	73.750	Oryctolagus_cuniculus
ENSCING00000013736	-	85	45.902	ENSORLG00000030507	mbnl1	97	38.667	Oryzias_latipes
ENSCING00000013736	-	78	63.218	ENSORLG00000002183	mbnl3	65	63.218	Oryzias_latipes
ENSCING00000013736	-	66	44.262	ENSORLG00020000914	-	70	44.767	Oryzias_latipes_hni
ENSCING00000013736	-	85	45.902	ENSORLG00020015303	mbnl1	98	38.591	Oryzias_latipes_hni
ENSCING00000013736	-	77	63.218	ENSORLG00020019753	mbnl3	65	63.218	Oryzias_latipes_hni
ENSCING00000013736	-	77	63.218	ENSORLG00015016520	mbnl3	65	63.218	Oryzias_latipes_hsok
ENSCING00000013736	-	85	45.902	ENSORLG00015015256	mbnl1	97	38.667	Oryzias_latipes_hsok
ENSCING00000013736	-	53	63.218	ENSOMEG00000018072	mbnl3	63	63.218	Oryzias_melastigma
ENSCING00000013736	-	86	44.706	ENSOMEG00000022944	mbnl1	97	38.983	Oryzias_melastigma
ENSCING00000013736	-	78	75.000	ENSOGAG00000003143	MBNL3	65	75.000	Otolemur_garnettii
ENSCING00000013736	-	90	72.093	ENSOARG00000012405	MBNL3	74	72.941	Ovis_aries
ENSCING00000013736	-	70	43.548	ENSPPAG00000034764	MBNL3	81	44.262	Pan_paniscus
ENSCING00000013736	-	78	73.750	ENSPPRG00000012374	MBNL3	69	74.684	Panthera_pardus
ENSCING00000013736	-	76	42.358	ENSPTIG00000016618	MBNL3	79	42.358	Panthera_tigris_altaica
ENSCING00000013736	-	70	43.548	ENSPTRG00000022280	MBNL3	81	44.262	Pan_troglodytes
ENSCING00000013736	-	78	56.452	ENSPANG00000011360	MBNL3	94	43.548	Papio_anubis
ENSCING00000013736	-	55	51.515	ENSPKIG00000021063	mbnl3	70	50.746	Paramormyrops_kingsleyae
ENSCING00000013736	-	78	68.000	ENSPSIG00000017914	MBNL3	75	62.617	Pelodiscus_sinensis
ENSCING00000013736	-	66	44.262	ENSPMGG00000011891	-	77	42.308	Periophthalmus_magnuspinnatus
ENSCING00000013736	-	85	75.610	ENSPEMG00000024156	Mbnl3	73	75.610	Peromyscus_maniculatus_bairdii
ENSCING00000013736	-	87	55.085	ENSPMAG00000005739	mbnl1	64	54.918	Petromyzon_marinus
ENSCING00000013736	-	50	78.082	ENSPCIG00000014292	MBNL3	54	77.922	Phascolarctos_cinereus
ENSCING00000013736	-	76	44.706	ENSPFOG00000023501	mbnl1	98	38.851	Poecilia_formosa
ENSCING00000013736	-	50	59.292	ENSPFOG00000009951	MBNL1	86	43.529	Poecilia_formosa
ENSCING00000013736	-	55	59.130	ENSPFOG00000008432	-	59	59.130	Poecilia_formosa
ENSCING00000013736	-	65	55.963	ENSPFOG00000008576	mbnl3	79	55.963	Poecilia_formosa
ENSCING00000013736	-	50	57.658	ENSPLAG00000021820	-	67	51.656	Poecilia_latipinna
ENSCING00000013736	-	77	78.667	ENSPLAG00000019686	mbnl1	86	60.000	Poecilia_latipinna
ENSCING00000013736	-	87	69.333	ENSPLAG00000009523	mbnl3	77	69.333	Poecilia_latipinna
ENSCING00000013736	-	52	75.362	ENSPMEG00000009993	mbnl2	94	57.143	Poecilia_mexicana
ENSCING00000013736	-	54	58.416	ENSPMEG00000009501	mbnl3	90	46.667	Poecilia_mexicana
ENSCING00000013736	-	50	60.000	ENSPMEG00000011573	-	83	60.000	Poecilia_mexicana
ENSCING00000013736	-	55	60.000	ENSPMEG00000001093	-	60	57.143	Poecilia_mexicana
ENSCING00000013736	-	61	54.464	ENSPREG00000009937	-	61	58.559	Poecilia_reticulata
ENSCING00000013736	-	65	55.660	ENSPREG00000008529	mbnl3	74	55.660	Poecilia_reticulata
ENSCING00000013736	-	73	42.623	ENSPREG00000016751	mbnl1	95	40.426	Poecilia_reticulata
ENSCING00000013736	-	55	57.143	ENSPREG00000002740	-	56	57.143	Poecilia_reticulata
ENSCING00000013736	-	67	43.548	ENSPPYG00000020726	MBNL3	78	43.548	Pongo_abelii
ENSCING00000013736	-	56	70.000	ENSPCAG00000014188	MBNL3	50	70.000	Procavia_capensis
ENSCING00000013736	-	50	65.686	ENSPCOG00000025398	MBNL3	69	65.686	Propithecus_coquereli
ENSCING00000013736	-	83	44.706	ENSPNYG00000009278	mbnl1	92	40.625	Pundamilia_nyererei
ENSCING00000013736	-	68	44.495	ENSPNAG00000005711	MBNL1	79	44.262	Pygocentrus_nattereri
ENSCING00000013736	-	54	69.444	ENSPNAG00000007910	mbnl3	71	59.184	Pygocentrus_nattereri
ENSCING00000013736	-	78	63.107	ENSRBIG00000028181	MBNL3	76	63.107	Rhinopithecus_bieti
ENSCING00000013736	-	78	63.107	ENSRROG00000040613	MBNL3	76	63.107	Rhinopithecus_roxellana
ENSCING00000013736	-	78	64.762	ENSSBOG00000026045	MBNL3	76	64.762	Saimiri_boliviensis_boliviensis
ENSCING00000013736	-	54	77.778	ENSSHAG00000014058	MBNL3	57	77.632	Sarcophilus_harrisii
ENSCING00000013736	-	78	67.532	ENSSFOG00015012501	mbnl3	73	57.759	Scleropages_formosus
ENSCING00000013736	-	51	52.239	ENSSFOG00015008968	mbnl3	67	52.239	Scleropages_formosus
ENSCING00000013736	-	65	56.897	ENSSMAG00000017087	mbnl3	76	56.897	Scophthalmus_maximus
ENSCING00000013736	-	70	44.262	ENSSMAG00000000990	mbnl1	79	50.289	Scophthalmus_maximus
ENSCING00000013736	-	62	59.574	ENSSDUG00000017970	mbnl3	64	69.737	Seriola_dumerili
ENSCING00000013736	-	56	55.738	ENSSDUG00000002243	-	57	57.724	Seriola_dumerili
ENSCING00000013736	-	73	44.262	ENSSDUG00000017900	mbnl1	85	44.706	Seriola_dumerili
ENSCING00000013736	-	75	44.262	ENSSLDG00000002279	-	73	45.146	Seriola_lalandi_dorsalis
ENSCING00000013736	-	76	53.731	ENSSLDG00000016857	mbnl3	62	59.574	Seriola_lalandi_dorsalis
ENSCING00000013736	-	78	77.632	ENSSPUG00000000301	MBNL3	65	77.632	Sphenodon_punctatus
ENSCING00000013736	-	78	72.500	ENSSSCG00000012676	MBNL3	74	72.500	Sus_scrofa
ENSCING00000013736	-	78	61.207	ENSTGUG00000002999	MBNL3	71	61.207	Taeniopygia_guttata
ENSCING00000013736	-	52	55.118	ENSTRUG00000017351	-	66	55.118	Takifugu_rubripes
ENSCING00000013736	-	71	46.269	ENSTRUG00000013858	mbnl1	83	46.269	Takifugu_rubripes
ENSCING00000013736	-	72	53.731	ENSTRUG00000012666	mbnl3	79	46.405	Takifugu_rubripes
ENSCING00000013736	-	70	53.731	ENSTNIG00000016812	mbnl3	80	51.613	Tetraodon_nigroviridis
ENSCING00000013736	-	78	73.750	ENSUAMG00000011410	MBNL3	91	50.000	Ursus_americanus
ENSCING00000013736	-	54	53.435	ENSUMAG00000012026	MBNL3	64	53.435	Ursus_maritimus
ENSCING00000013736	-	52	45.455	ENSUMAG00000025199	MBNL2	64	68.571	Ursus_maritimus
ENSCING00000013736	-	78	40.789	ENSVPAG00000004743	MBNL3	95	40.789	Vicugna_pacos
ENSCING00000013736	-	85	51.282	ENSVVUG00000013862	MBNL3	91	43.541	Vulpes_vulpes
ENSCING00000013736	-	64	61.345	ENSXETG00000005409	mbnl3	71	61.345	Xenopus_tropicalis
ENSCING00000013736	-	55	60.000	ENSXCOG00000019080	-	58	60.000	Xiphophorus_couchianus
ENSCING00000013736	-	58	69.333	ENSXMAG00000013089	mbnl3	77	69.333	Xiphophorus_maculatus
ENSCING00000013736	-	76	42.623	ENSXMAG00000015135	mbnl1	97	40.067	Xiphophorus_maculatus
ENSCING00000013736	-	55	60.000	ENSXMAG00000004712	-	64	57.937	Xiphophorus_maculatus