EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4074 bases
Position: chr1:2629176-2633249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025121	AKAP7_NLS	PF10469.9	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025367	-	1255	-	ENSCINP00000025121	339 (aa)	-	F6RKZ1

Gene Model

Click here to download ENSCING00000013747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013747	-	82	47.368	ENSACLG00000021615	-	51	47.368	Astatotilapia_calliptera
ENSCING00000013747	-	98	33.043	ENSCPBG00000016763	LENG9	76	33.913	Chrysemys_picta_bellii
ENSCING00000013747	-	82	46.316	ENSCSEG00000018718	-	65	46.316	Cynoglossus_semilaevis
ENSCING00000013747	-	98	48.421	ENSCVAG00000007812	-	66	48.421	Cyprinodon_variegatus
ENSCING00000013747	-	86	30.068	ENSGMOG00000004924	leng9	75	30.068	Gadus_morhua
ENSCING00000013747	-	98	46.316	ENSGAFG00000013280	-	57	46.316	Gambusia_affinis
ENSCING00000013747	-	94	46.316	ENSGACG00000010726	-	71	45.055	Gasterosteus_aculeatus
ENSCING00000013747	-	96	33.333	ENSGAGG00000018912	LENG9	75	34.278	Gopherus_agassizii
ENSCING00000013747	-	82	47.368	ENSHBUG00000013531	-	50	47.368	Haplochromis_burtoni
ENSCING00000013747	-	85	46.316	ENSKMAG00000005354	-	59	46.316	Kryptolebias_marmoratus
ENSCING00000013747	-	98	32.000	ENSLACG00000012924	LENG9	76	32.571	Latimeria_chalumnae
ENSCING00000013747	-	95	41.791	ENSMAMG00000019552	-	55	41.791	Mastacembelus_armatus
ENSCING00000013747	-	82	47.368	ENSMZEG00005016430	-	51	47.368	Maylandia_zebra
ENSCING00000013747	-	87	43.443	ENSMPUG00000018631	LENG9	61	44.262	Mustela_putorius_furo
ENSCING00000013747	-	98	39.535	ENSONIG00000012767	-	87	30.508	Oreochromis_niloticus
ENSCING00000013747	-	94	40.625	ENSORLG00000011328	-	56	40.625	Oryzias_latipes
ENSCING00000013747	-	94	40.625	ENSORLG00020007474	-	56	40.625	Oryzias_latipes_hni
ENSCING00000013747	-	94	40.625	ENSORLG00015013245	-	57	40.625	Oryzias_latipes_hsok
ENSCING00000013747	-	95	41.353	ENSOMEG00000010765	-	59	41.353	Oryzias_melastigma
ENSCING00000013747	-	94	46.154	ENSPMGG00000012138	-	78	46.154	Periophthalmus_magnuspinnatus
ENSCING00000013747	-	84	46.316	ENSPFOG00000009984	-	50	46.316	Poecilia_formosa
ENSCING00000013747	-	94	39.062	ENSPLAG00000012683	-	56	39.062	Poecilia_latipinna
ENSCING00000013747	-	94	39.062	ENSPMEG00000017453	-	50	46.316	Poecilia_mexicana
ENSCING00000013747	-	82	47.368	ENSPNYG00000001936	-	51	47.368	Pundamilia_nyererei
ENSCING00000013747	-	95	40.602	ENSSMAG00000012988	-	56	40.602	Scophthalmus_maximus
ENSCING00000013747	-	84	51.961	ENSSPUG00000002762	LENG9	57	51.961	Sphenodon_punctatus
ENSCING00000013747	-	83	48.913	ENSSPAG00000016516	-	58	48.913	Stegastes_partitus
ENSCING00000013747	-	87	43.443	ENSSSCG00000003269	LENG9	55	43.443	Sus_scrofa
ENSCING00000013747	-	100	47.826	ENSTNIG00000008093	-	71	47.826	Tetraodon_nigroviridis
ENSCING00000013747	-	84	49.474	ENSTTRG00000006593	LENG9	57	49.474	Tursiops_truncatus
ENSCING00000013747	-	98	33.143	ENSXETG00000027476	leng9	78	33.143	Xenopus_tropicalis
ENSCING00000013747	-	100	31.054	ENSXCOG00000019442	-	92	30.398	Xiphophorus_couchianus
ENSCING00000013747	-	84	46.316	ENSXMAG00000023792	-	50	46.316	Xiphophorus_maculatus