EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000013754 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5872 bases
Position: chr1:2488918-2494789
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005618	TROVE	PF05731.11	5.6e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005618	-	1303	-	ENSCINP00000005618	409 (aa)	-	F7AHS5

Gene Model

Click here to download ENSCING00000013754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000013754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000013754	-	94	30.026	ENSG00000116747	RO60	72	30.026	Homo_sapiens
ENSCING00000013754	-	94	30.548	ENSAMEG00000015881	TROVE2	69	30.548	Ailuropoda_melanoleuca
ENSCING00000013754	-	94	30.287	ENSAPLG00000003121	TROVE2	69	30.287	Anas_platyrhynchos
ENSCING00000013754	-	94	30.548	ENSACAG00000008263	TROVE2	69	30.548	Anolis_carolinensis
ENSCING00000013754	-	94	30.287	ENSCAFG00000010552	TROVE2	67	30.287	Canis_familiaris
ENSCING00000013754	-	94	30.287	ENSCAFG00020004457	TROVE2	70	30.287	Canis_lupus_dingo
ENSCING00000013754	-	94	31.332	ENSCHIG00000018260	TROVE2	69	31.332	Capra_hircus
ENSCING00000013754	-	94	30.548	ENSTSYG00000004227	TROVE2	72	30.548	Carlito_syrichta
ENSCING00000013754	-	94	30.287	ENSCPOG00000000669	TROVE2	72	30.287	Cavia_porcellus
ENSCING00000013754	-	87	30.056	ENSCCAG00000027978	TROVE2	78	30.056	Cebus_capucinus
ENSCING00000013754	-	94	30.287	ENSCLAG00000016391	TROVE2	69	30.287	Chinchilla_lanigera
ENSCING00000013754	-	94	30.026	ENSCSAG00000013402	TROVE2	69	30.026	Chlorocebus_sabaeus
ENSCING00000013754	-	74	34.746	ENSCHOG00000009571	TROVE2	55	34.746	Choloepus_hoffmanni
ENSCING00000013754	-	93	30.789	ENSCPBG00000010558	TROVE2	69	30.789	Chrysemys_picta_bellii
ENSCING00000013754	-	54	68.778	ENSCSAVG00000008732	-	91	68.780	Ciona_savignyi
ENSCING00000013754	-	94	30.026	ENSCANG00000041293	TROVE2	69	30.026	Colobus_angolensis_palliatus
ENSCING00000013754	-	94	31.250	ENSCGRG00001016925	Trove2	70	31.250	Cricetulus_griseus_chok1gshd
ENSCING00000013754	-	94	31.250	ENSCGRG00000003396	Trove2	70	31.250	Cricetulus_griseus_crigri
ENSCING00000013754	-	94	30.809	ENSDORG00000006152	Trove2	69	30.809	Dipodomys_ordii
ENSCING00000013754	-	94	31.070	ENSEEUG00000014190	TROVE2	69	31.070	Erinaceus_europaeus
ENSCING00000013754	-	90	30.163	ENSELUG00000004473	trove2	67	30.707	Esox_lucius
ENSCING00000013754	-	94	30.026	ENSFCAG00000010161	TROVE2	70	30.026	Felis_catus
ENSCING00000013754	-	89	30.601	ENSFALG00000002913	TROVE2	67	30.601	Ficedula_albicollis
ENSCING00000013754	-	94	30.548	ENSFDAG00000015923	TROVE2	69	30.548	Fukomys_damarensis
ENSCING00000013754	-	94	31.332	ENSGAGG00000017742	TROVE2	69	31.332	Gopherus_agassizii
ENSCING00000013754	-	94	30.026	ENSGGOG00000034815	TROVE2	72	30.026	Gorilla_gorilla
ENSCING00000013754	-	94	30.287	ENSHGLG00000003152	TROVE2	69	30.287	Heterocephalus_glaber_female
ENSCING00000013754	-	94	30.287	ENSHGLG00100010586	TROVE2	69	30.287	Heterocephalus_glaber_male
ENSCING00000013754	-	94	31.854	ENSJJAG00000019489	Trove2	69	31.854	Jaculus_jaculus
ENSCING00000013754	-	95	30.711	ENSLACG00000007822	TROVE2	69	31.169	Latimeria_chalumnae
ENSCING00000013754	-	95	31.538	ENSLOCG00000007384	trove2	70	31.538	Lepisosteus_oculatus
ENSCING00000013754	-	94	30.548	ENSLAFG00000014808	TROVE2	69	30.548	Loxodonta_africana
ENSCING00000013754	-	94	30.026	ENSMFAG00000016020	TROVE2	72	30.026	Macaca_fascicularis
ENSCING00000013754	-	94	30.026	ENSMMUG00000022643	TROVE2	72	30.026	Macaca_mulatta
ENSCING00000013754	-	94	30.026	ENSMNEG00000039348	TROVE2	72	30.026	Macaca_nemestrina
ENSCING00000013754	-	94	30.287	ENSMGAG00000005429	TROVE2	69	30.287	Meleagris_gallopavo
ENSCING00000013754	-	94	31.510	ENSMAUG00000008125	Trove2	70	31.510	Mesocricetus_auratus
ENSCING00000013754	-	94	30.026	ENSMICG00000011506	TROVE2	72	30.026	Microcebus_murinus
ENSCING00000013754	-	93	31.053	ENSMOCG00000021175	Trove2	69	31.053	Microtus_ochrogaster
ENSCING00000013754	-	94	30.287	ENSMODG00000012203	TROVE2	69	30.287	Monodelphis_domestica
ENSCING00000013754	-	94	31.771	MGP_CAROLIEiJ_G0014676	Trove2	70	31.771	Mus_caroli
ENSCING00000013754	-	93	32.895	ENSMUSG00000018199	Trove2	69	32.895	Mus_musculus
ENSCING00000013754	-	94	32.031	MGP_PahariEiJ_G0027912	Trove2	63	32.031	Mus_pahari
ENSCING00000013754	-	94	32.292	MGP_SPRETEiJ_G0015483	Trove2	75	32.292	Mus_spretus
ENSCING00000013754	-	94	30.026	ENSMPUG00000004631	TROVE2	69	30.026	Mustela_putorius_furo
ENSCING00000013754	-	94	30.412	ENSMLUG00000001442	TROVE2	70	30.412	Myotis_lucifugus
ENSCING00000013754	-	94	30.287	ENSNLEG00000018048	TROVE2	70	30.287	Nomascus_leucogenys
ENSCING00000013754	-	94	30.026	ENSODEG00000010468	TROVE2	69	30.026	Octodon_degus
ENSCING00000013754	-	96	31.646	ENSOANG00000002961	TROVE2	71	31.646	Ornithorhynchus_anatinus
ENSCING00000013754	-	94	30.287	ENSOCUG00000012814	TROVE2	69	30.287	Oryctolagus_cuniculus
ENSCING00000013754	-	94	31.332	ENSOGAG00000032047	TROVE2	70	31.332	Otolemur_garnettii
ENSCING00000013754	-	94	31.332	ENSOARG00000009462	TROVE2	67	31.332	Ovis_aries
ENSCING00000013754	-	94	30.026	ENSPPAG00000043846	TROVE2	69	30.026	Pan_paniscus
ENSCING00000013754	-	94	30.026	ENSPPRG00000017233	TROVE2	70	30.026	Panthera_pardus
ENSCING00000013754	-	94	30.026	ENSPTIG00000015535	TROVE2	70	30.026	Panthera_tigris_altaica
ENSCING00000013754	-	94	30.026	ENSPTRG00000001794	TROVE2	72	30.026	Pan_troglodytes
ENSCING00000013754	-	93	30.789	ENSPSIG00000009877	TROVE2	69	30.789	Pelodiscus_sinensis
ENSCING00000013754	-	93	31.842	ENSPEMG00000001419	Trove2	69	31.842	Peromyscus_maniculatus_bairdii
ENSCING00000013754	-	94	30.809	ENSPCIG00000028632	TROVE2	72	30.790	Phascolarctos_cinereus
ENSCING00000013754	-	94	30.026	ENSPPYG00000000397	TROVE2	69	30.026	Pongo_abelii
ENSCING00000013754	-	94	30.548	ENSPCAG00000003959	TROVE2	69	30.548	Procavia_capensis
ENSCING00000013754	-	94	30.287	ENSPCOG00000015951	-	72	30.287	Propithecus_coquereli
ENSCING00000013754	-	93	32.368	ENSRNOG00000003434	Trove2	69	32.368	Rattus_norvegicus
ENSCING00000013754	-	94	30.026	ENSRBIG00000030073	TROVE2	71	30.026	Rhinopithecus_bieti
ENSCING00000013754	-	94	30.026	ENSRROG00000034428	TROVE2	72	30.026	Rhinopithecus_roxellana
ENSCING00000013754	-	94	30.809	ENSSHAG00000013205	TROVE2	69	30.809	Sarcophilus_harrisii
ENSCING00000013754	-	94	30.287	ENSSARG00000009347	TROVE2	69	30.287	Sorex_araneus
ENSCING00000013754	-	94	30.809	ENSSPUG00000014304	TROVE2	69	30.809	Sphenodon_punctatus
ENSCING00000013754	-	94	30.809	ENSSSCG00000032055	TROVE2	69	30.809	Sus_scrofa
ENSCING00000013754	-	90	30.707	ENSTGUG00000004126	TROVE2	70	30.707	Taeniopygia_guttata
ENSCING00000013754	-	94	30.548	ENSTTRG00000009291	TROVE2	69	30.548	Tursiops_truncatus
ENSCING00000013754	-	94	30.026	ENSUAMG00000013365	TROVE2	69	30.026	Ursus_americanus
ENSCING00000013754	-	94	30.287	ENSUMAG00000020464	TROVE2	69	30.287	Ursus_maritimus
ENSCING00000013754	-	94	30.287	ENSVPAG00000010303	TROVE2	69	30.287	Vicugna_pacos
ENSCING00000013754	-	94	30.287	ENSVVUG00000013405	TROVE2	52	30.287	Vulpes_vulpes
ENSCING00000013754	-	94	30.469	ENSXETG00000017224	trove2	70	30.469	Xenopus_tropicalis