EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014054 (Gene tree)
Gene ID: 100175037
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2081 bases
Position: chr12:5265089-5267169
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025561	RNase_H	PF00075.24	9.8e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025807	-	893	-	ENSCINP00000025561	294 (aa)	-	F6QPH0

Gene Model

Click here to download ENSCING00000014054's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014054	-	91	39.273	ENSG00000171865	RNASEH1	89	39.273	Homo_sapiens
ENSCING00000014054	-	93	37.226	ENSAPOG00000000412	rnaseh1	89	37.226	Acanthochromis_polyacanthus
ENSCING00000014054	-	92	41.544	ENSAMEG00000018433	RNASEH1	89	41.544	Ailuropoda_melanoleuca
ENSCING00000014054	-	93	36.396	ENSACIG00000014666	rnaseh1	88	36.396	Amphilophus_citrinellus
ENSCING00000014054	-	93	36.364	ENSAOCG00000015210	rnaseh1	89	36.364	Amphiprion_ocellaris
ENSCING00000014054	-	99	36.149	ENSAPEG00000014104	rnaseh1	96	36.149	Amphiprion_percula
ENSCING00000014054	-	99	35.811	ENSATEG00000000598	rnaseh1	95	35.811	Anabas_testudineus
ENSCING00000014054	-	88	38.258	ENSAPLG00000001961	RNASEH1	99	38.258	Anas_platyrhynchos
ENSCING00000014054	-	91	38.667	ENSACAG00000016857	rnaseh1	90	38.667	Anolis_carolinensis
ENSCING00000014054	-	97	37.294	ENSANAG00000024055	RNASEH1	95	37.294	Aotus_nancymaae
ENSCING00000014054	-	93	37.050	ENSACLG00000006741	rnaseh1	88	37.050	Astatotilapia_calliptera
ENSCING00000014054	-	92	38.652	ENSAMXG00000042940	rnaseh1	96	38.652	Astyanax_mexicanus
ENSCING00000014054	-	93	40.000	ENSBTAG00000016235	RNASEH1	93	39.350	Bos_taurus
ENSCING00000014054	-	92	38.007	WBGene00004382	rnh-1.0	96	38.007	Caenorhabditis_elegans
ENSCING00000014054	-	95	38.742	ENSCJAG00000035450	RNASEH1	93	38.742	Callithrix_jacchus
ENSCING00000014054	-	92	38.043	ENSCAFG00000003259	RNASEH1	90	37.993	Canis_familiaris
ENSCING00000014054	-	50	38.255	ENSCHIG00000022230	-	61	38.255	Capra_hircus
ENSCING00000014054	-	93	38.929	ENSCHIG00000022264	-	91	38.929	Capra_hircus
ENSCING00000014054	-	98	39.041	ENSTSYG00000012926	RNASEH1	95	39.041	Carlito_syrichta
ENSCING00000014054	-	86	38.403	ENSCAPG00000004813	RNASEH1	98	38.403	Cavia_aperea
ENSCING00000014054	-	92	39.286	ENSCPOG00000022278	Rnaseh1	87	39.286	Cavia_porcellus
ENSCING00000014054	-	95	38.411	ENSCCAG00000038017	RNASEH1	93	38.411	Cebus_capucinus
ENSCING00000014054	-	91	36.431	ENSCATG00000016818	-	88	36.431	Cercocebus_atys
ENSCING00000014054	-	97	39.384	ENSCATG00000016515	-	94	39.384	Cercocebus_atys
ENSCING00000014054	-	94	38.929	ENSCLAG00000002440	RNASEH1	91	38.929	Chinchilla_lanigera
ENSCING00000014054	-	97	38.944	ENSCSAG00000006943	RNASEH1	94	38.944	Chlorocebus_sabaeus
ENSCING00000014054	-	55	49.383	ENSCHOG00000008547	RNASEH1	80	49.383	Choloepus_hoffmanni
ENSCING00000014054	-	91	39.286	ENSCPBG00000021620	RNASEH1	98	39.286	Chrysemys_picta_bellii
ENSCING00000014054	-	78	57.391	ENSCSAVG00000000009	-	96	57.391	Ciona_savignyi
ENSCING00000014054	-	97	39.604	ENSCANG00000037763	RNASEH1	94	39.604	Colobus_angolensis_palliatus
ENSCING00000014054	-	91	40.672	ENSCGRG00001008950	Rnaseh1	89	38.806	Cricetulus_griseus_chok1gshd
ENSCING00000014054	-	91	40.672	ENSCGRG00000006029	Rnaseh1	89	38.806	Cricetulus_griseus_crigri
ENSCING00000014054	-	94	36.237	ENSCSEG00000005741	rnaseh1	93	35.294	Cynoglossus_semilaevis
ENSCING00000014054	-	99	35.880	ENSCVAG00000018717	rnaseh1	96	35.880	Cyprinodon_variegatus
ENSCING00000014054	-	92	38.628	ENSDARG00000042571	rnaseh1	97	38.628	Danio_rerio
ENSCING00000014054	-	95	39.721	ENSDNOG00000016056	RNASEH1	92	39.721	Dasypus_novemcinctus
ENSCING00000014054	-	91	39.033	ENSDORG00000000704	Rnaseh1	89	39.033	Dipodomys_ordii
ENSCING00000014054	-	96	36.364	FBgn0023171	rnh1	95	36.364	Drosophila_melanogaster
ENSCING00000014054	-	91	36.900	ENSETEG00000012674	RNASEH1	88	36.900	Echinops_telfairi
ENSCING00000014054	-	93	36.996	ENSEBUG00000006116	rnaseh1	79	36.996	Eptatretus_burgeri
ENSCING00000014054	-	93	37.543	ENSEBUG00000008898	rnaseh1	99	37.543	Eptatretus_burgeri
ENSCING00000014054	-	97	38.408	ENSEASG00005022200	RNASEH1	93	38.408	Equus_asinus_asinus
ENSCING00000014054	-	97	38.408	ENSECAG00000020695	RNASEH1	93	38.408	Equus_caballus
ENSCING00000014054	-	97	37.333	ENSELUG00000010112	rnaseh1	97	37.333	Esox_lucius
ENSCING00000014054	-	97	39.024	ENSFCAG00000025832	RNASEH1	95	39.024	Felis_catus
ENSCING00000014054	-	98	37.671	ENSFALG00000002069	RNASEH1	98	37.671	Ficedula_albicollis
ENSCING00000014054	-	91	38.462	ENSFDAG00000002035	RNASEH1	79	38.462	Fukomys_damarensis
ENSCING00000014054	-	92	38.989	ENSGMOG00000013818	rnaseh1	89	38.989	Gadus_morhua
ENSCING00000014054	-	99	38.567	ENSGALG00000016389	RNASEH1	99	38.567	Gallus_gallus
ENSCING00000014054	-	99	37.000	ENSGAFG00000001776	rnaseh1	98	37.000	Gambusia_affinis
ENSCING00000014054	-	92	38.768	ENSGACG00000011935	rnaseh1	89	38.768	Gasterosteus_aculeatus
ENSCING00000014054	-	91	39.852	ENSGAGG00000009150	RNASEH1	61	39.852	Gopherus_agassizii
ENSCING00000014054	-	91	39.259	ENSGGOG00000034822	RNASEH1	89	39.259	Gorilla_gorilla
ENSCING00000014054	-	93	37.410	ENSHBUG00000004666	rnaseh1	88	37.410	Haplochromis_burtoni
ENSCING00000014054	-	95	40.000	ENSHGLG00000002585	Rnaseh1	84	40.000	Heterocephalus_glaber_female
ENSCING00000014054	-	95	40.000	ENSHGLG00100005105	Rnaseh1	84	40.000	Heterocephalus_glaber_male
ENSCING00000014054	-	92	36.429	ENSHCOG00000012329	rnaseh1	88	36.429	Hippocampus_comes
ENSCING00000014054	-	96	39.860	ENSIPUG00000023060	rnaseh1	97	40.659	Ictalurus_punctatus
ENSCING00000014054	-	91	41.606	ENSSTOG00000012774	RNASEH1	96	40.550	Ictidomys_tridecemlineatus
ENSCING00000014054	-	98	37.153	ENSJJAG00000021481	-	96	37.153	Jaculus_jaculus
ENSCING00000014054	-	97	31.930	ENSJJAG00000008994	-	97	31.930	Jaculus_jaculus
ENSCING00000014054	-	90	39.623	ENSJJAG00000020238	Rnaseh1	97	39.623	Jaculus_jaculus
ENSCING00000014054	-	98	36.207	ENSKMAG00000001373	rnaseh1	95	36.207	Kryptolebias_marmoratus
ENSCING00000014054	-	92	35.793	ENSLBEG00000004480	rnaseh1	95	33.948	Labrus_bergylta
ENSCING00000014054	-	93	38.144	ENSLACG00000007100	RNASEH1	89	39.175	Latimeria_chalumnae
ENSCING00000014054	-	92	41.516	ENSLOCG00000017212	rnaseh1	97	41.367	Lepisosteus_oculatus
ENSCING00000014054	-	91	41.026	ENSLAFG00000015091	RNASEH1	89	41.026	Loxodonta_africana
ENSCING00000014054	-	97	39.604	ENSMFAG00000000063	-	94	39.604	Macaca_fascicularis
ENSCING00000014054	-	97	36.332	ENSMFAG00000002323	-	95	36.332	Macaca_fascicularis
ENSCING00000014054	-	97	37.024	ENSMMUG00000019280	-	95	37.024	Macaca_mulatta
ENSCING00000014054	-	97	36.678	ENSMNEG00000029676	-	95	36.678	Macaca_nemestrina
ENSCING00000014054	-	97	39.604	ENSMNEG00000040183	-	94	39.604	Macaca_nemestrina
ENSCING00000014054	-	91	37.868	ENSMLEG00000028662	-	88	37.868	Mandrillus_leucophaeus
ENSCING00000014054	-	85	38.290	ENSMLEG00000039352	-	98	38.290	Mandrillus_leucophaeus
ENSCING00000014054	-	93	36.101	ENSMAMG00000019725	rnaseh1	94	36.101	Mastacembelus_armatus
ENSCING00000014054	-	93	37.050	ENSMZEG00005013006	rnaseh1	88	37.050	Maylandia_zebra
ENSCING00000014054	-	57	46.703	ENSMGAG00000013979	RNASEH1	74	46.703	Meleagris_gallopavo
ENSCING00000014054	-	91	41.418	ENSMAUG00000014957	Rnaseh1	89	41.418	Mesocricetus_auratus
ENSCING00000014054	-	91	39.777	ENSMICG00000033156	RNASEH1	88	39.777	Microcebus_murinus
ENSCING00000014054	-	91	39.179	ENSMOCG00000015522	Rnaseh1	89	39.179	Microtus_ochrogaster
ENSCING00000014054	-	94	38.078	ENSMMOG00000015902	rnaseh1	89	38.078	Mola_mola
ENSCING00000014054	-	91	40.299	ENSMODG00000014491	-	88	40.299	Monodelphis_domestica
ENSCING00000014054	-	98	36.271	ENSMALG00000010565	rnaseh1	96	36.271	Monopterus_albus
ENSCING00000014054	-	91	41.045	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	41.045	Mus_caroli
ENSCING00000014054	-	91	41.045	ENSMUSG00000020630	Rnaseh1	89	41.045	Mus_musculus
ENSCING00000014054	-	91	42.910	MGP_PahariEiJ_G0029418	Rnaseh1	89	41.418	Mus_pahari
ENSCING00000014054	-	91	41.791	MGP_SPRETEiJ_G0018502	Rnaseh1	89	41.791	Mus_spretus
ENSCING00000014054	-	64	44.211	ENSMPUG00000012984	RNASEH1	92	44.211	Mustela_putorius_furo
ENSCING00000014054	-	91	38.849	ENSNGAG00000015966	Rnaseh1	84	38.849	Nannospalax_galili
ENSCING00000014054	-	93	37.410	ENSNBRG00000008739	rnaseh1	88	37.410	Neolamprologus_brichardi
ENSCING00000014054	-	91	35.556	ENSNLEG00000015400	RNASEH1	87	35.556	Nomascus_leucogenys
ENSCING00000014054	-	85	35.769	ENSNLEG00000000059	-	88	35.769	Nomascus_leucogenys
ENSCING00000014054	-	72	33.636	ENSMEUG00000003610	-	69	33.636	Notamacropus_eugenii
ENSCING00000014054	-	96	38.652	ENSOPRG00000005072	RNASEH1	92	38.652	Ochotona_princeps
ENSCING00000014054	-	94	38.571	ENSODEG00000000235	Rnaseh1	88	38.571	Octodon_degus
ENSCING00000014054	-	93	35.915	ENSONIG00000018697	rnaseh1	98	35.915	Oreochromis_niloticus
ENSCING00000014054	-	91	41.758	ENSOCUG00000006117	RNASEH1	94	41.034	Oryctolagus_cuniculus
ENSCING00000014054	-	93	37.676	ENSORLG00000018127	rnaseh1	95	37.676	Oryzias_latipes
ENSCING00000014054	-	93	37.676	ENSORLG00020013660	rnaseh1	96	36.601	Oryzias_latipes_hni
ENSCING00000014054	-	93	37.545	ENSORLG00015011338	rnaseh1	96	36.271	Oryzias_latipes_hsok
ENSCING00000014054	-	90	37.011	ENSOMEG00000004710	rnaseh1	98	37.011	Oryzias_melastigma
ENSCING00000014054	-	97	38.754	ENSOGAG00000017176	RNASEH1	95	38.754	Otolemur_garnettii
ENSCING00000014054	-	93	36.934	ENSOARG00000005386	RNASEH1	91	36.934	Ovis_aries
ENSCING00000014054	-	91	39.273	ENSPPAG00000034221	RNASEH1	89	39.273	Pan_paniscus
ENSCING00000014054	-	97	38.676	ENSPPRG00000015513	RNASEH1	95	38.676	Panthera_pardus
ENSCING00000014054	-	85	38.889	ENSPTIG00000019034	RNASEH1	83	38.889	Panthera_tigris_altaica
ENSCING00000014054	-	88	34.733	ENSPTRG00000043403	-	92	34.733	Pan_troglodytes
ENSCING00000014054	-	91	39.273	ENSPTRG00000011614	RNASEH1	89	39.273	Pan_troglodytes
ENSCING00000014054	-	97	38.284	ENSPANG00000000443	RNASEH1	97	38.007	Papio_anubis
ENSCING00000014054	-	91	36.029	ENSPANG00000018246	-	88	36.029	Papio_anubis
ENSCING00000014054	-	92	37.722	ENSPKIG00000003146	rnaseh1	97	38.434	Paramormyrops_kingsleyae
ENSCING00000014054	-	93	40.909	ENSPSIG00000002937	RNASEH1	99	40.909	Pelodiscus_sinensis
ENSCING00000014054	-	92	33.333	ENSPMGG00000017463	rnaseh1	90	33.333	Periophthalmus_magnuspinnatus
ENSCING00000014054	-	91	38.603	ENSPEMG00000022465	-	89	39.560	Peromyscus_maniculatus_bairdii
ENSCING00000014054	-	95	38.163	ENSPCIG00000023334	-	91	38.163	Phascolarctos_cinereus
ENSCING00000014054	-	98	36.577	ENSPFOG00000002841	rnaseh1	97	36.577	Poecilia_formosa
ENSCING00000014054	-	66	37.438	ENSPLAG00000021349	-	74	37.438	Poecilia_latipinna
ENSCING00000014054	-	97	36.486	ENSPMEG00000016826	rnaseh1	96	36.486	Poecilia_mexicana
ENSCING00000014054	-	98	36.789	ENSPREG00000012197	rnaseh1	97	36.789	Poecilia_reticulata
ENSCING00000014054	-	85	47.321	ENSPPYG00000025873	RNASEH1	87	47.321	Pongo_abelii
ENSCING00000014054	-	84	34.586	ENSPPYG00000008067	-	90	34.586	Pongo_abelii
ENSCING00000014054	-	92	37.591	ENSPCAG00000002500	RNASEH1	90	37.591	Procavia_capensis
ENSCING00000014054	-	91	34.944	ENSPCOG00000019444	RNASEH1	88	34.944	Propithecus_coquereli
ENSCING00000014054	-	92	37.634	ENSPVAG00000002070	RNASEH1	90	37.634	Pteropus_vampyrus
ENSCING00000014054	-	93	36.691	ENSPNYG00000001292	rnaseh1	88	36.691	Pundamilia_nyererei
ENSCING00000014054	-	92	40.364	ENSPNAG00000022344	rnaseh1	89	40.364	Pygocentrus_nattereri
ENSCING00000014054	-	91	41.418	ENSRNOG00000008584	Rnaseh1	89	40.672	Rattus_norvegicus
ENSCING00000014054	-	96	40.532	ENSRBIG00000034222	RNASEH1	92	40.532	Rhinopithecus_bieti
ENSCING00000014054	-	96	40.532	ENSRROG00000041761	RNASEH1	92	40.532	Rhinopithecus_roxellana
ENSCING00000014054	-	92	47.727	YMR234W	-	84	47.727	Saccharomyces_cerevisiae
ENSCING00000014054	-	95	38.000	ENSSBOG00000025411	RNASEH1	93	38.000	Saimiri_boliviensis_boliviensis
ENSCING00000014054	-	96	39.161	ENSSHAG00000013051	RNASEH1	91	39.161	Sarcophilus_harrisii
ENSCING00000014054	-	98	38.699	ENSSFOG00015002709	rnaseh1	98	37.785	Scleropages_formosus
ENSCING00000014054	-	93	37.818	ENSSMAG00000007586	rnaseh1	88	37.818	Scophthalmus_maximus
ENSCING00000014054	-	93	37.276	ENSSDUG00000008217	rnaseh1	94	37.276	Seriola_dumerili
ENSCING00000014054	-	98	35.254	ENSSLDG00000000442	rnaseh1	99	35.254	Seriola_lalandi_dorsalis
ENSCING00000014054	-	92	39.785	ENSSPUG00000006644	RNASEH1	92	39.785	Sphenodon_punctatus
ENSCING00000014054	-	93	36.691	ENSSPAG00000009353	rnaseh1	88	36.691	Stegastes_partitus
ENSCING00000014054	-	96	38.328	ENSSSCG00000025305	RNASEH1	94	38.062	Sus_scrofa
ENSCING00000014054	-	97	36.897	ENSTGUG00000012980	RNASEH1	97	36.897	Taeniopygia_guttata
ENSCING00000014054	-	93	38.129	ENSTRUG00000015774	rnaseh1	96	38.129	Takifugu_rubripes
ENSCING00000014054	-	93	38.489	ENSTNIG00000010715	rnaseh1	96	38.489	Tetraodon_nigroviridis
ENSCING00000014054	-	96	36.426	ENSTTRG00000001615	RNASEH1	94	36.426	Tursiops_truncatus
ENSCING00000014054	-	54	49.367	ENSUAMG00000018254	RNASEH1	82	49.367	Ursus_americanus
ENSCING00000014054	-	70	38.389	ENSUMAG00000003941	RNASEH1	63	38.389	Ursus_maritimus
ENSCING00000014054	-	98	32.542	ENSVPAG00000011589	RNASEH1	96	32.542	Vicugna_pacos
ENSCING00000014054	-	92	38.043	ENSVVUG00000008633	RNASEH1	80	38.043	Vulpes_vulpes
ENSCING00000014054	-	96	34.589	ENSXETG00000001212	rnaseh1	96	35.959	Xenopus_tropicalis
ENSCING00000014054	-	67	45.946	ENSXETG00000030371	-	97	45.946	Xenopus_tropicalis
ENSCING00000014054	-	100	37.500	ENSXMAG00000002357	rnaseh1	99	37.500	Xiphophorus_maculatus