EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014236 (Gene tree)
Gene ID: 100182431
Gene Symbol: -
Alias: -
Full Name: 30S ribosomal protein S12-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1659 bases
Position: chr9:1484316-1485974
Accession: 100182431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025837	Ribosom_S12_S23	PF00164.25	5.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000026083	-	733	-	ENSCINP00000025837	186 (aa)	XP_002131013	F6XZL0

Gene Model

Click here to download ENSCING00000014236's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014236	-	51	57.895	ENSG00000128626	MRPS12	62	62.791	Homo_sapiens
ENSCING00000014236	-	70	48.889	ENSAPOG00000005047	si:dkey-17e16.10	59	67.059	Acanthochromis_polyacanthus
ENSCING00000014236	-	70	49.630	ENSACIG00000016095	si:dkey-17e16.10	59	68.235	Amphilophus_citrinellus
ENSCING00000014236	-	70	50.370	ENSAOCG00000018530	si:dkey-17e16.10	59	69.412	Amphiprion_ocellaris
ENSCING00000014236	-	70	50.370	ENSAPEG00000019785	si:dkey-17e16.10	59	69.412	Amphiprion_percula
ENSCING00000014236	-	70	51.111	ENSATEG00000018924	si:dkey-17e16.10	59	70.588	Anabas_testudineus
ENSCING00000014236	-	51	63.158	ENSACAG00000003829	MRPS12	60	67.816	Anolis_carolinensis
ENSCING00000014236	-	51	57.895	ENSANAG00000033654	MRPS12	62	62.791	Aotus_nancymaae
ENSCING00000014236	-	70	49.630	ENSACLG00000013979	si:dkey-17e16.10	56	68.235	Astatotilapia_calliptera
ENSCING00000014236	-	61	57.522	ENSAMXG00000025945	si:dkey-17e16.10	57	68.675	Astyanax_mexicanus
ENSCING00000014236	-	70	46.154	WBGene00011391	mrps-12	55	56.322	Caenorhabditis_elegans
ENSCING00000014236	-	51	57.895	ENSCJAG00000043176	MRPS12	63	62.069	Callithrix_jacchus
ENSCING00000014236	-	51	60.000	ENSTSYG00000009568	MRPS12	62	65.116	Carlito_syrichta
ENSCING00000014236	-	58	54.955	ENSCAPG00000009543	MRPS12	63	65.116	Cavia_aperea
ENSCING00000014236	-	51	57.895	ENSCCAG00000035388	MRPS12	62	62.791	Cebus_capucinus
ENSCING00000014236	-	51	58.947	ENSCATG00000038438	MRPS12	62	63.953	Cercocebus_atys
ENSCING00000014236	-	51	58.947	ENSCSAG00000003929	MRPS12	62	63.953	Chlorocebus_sabaeus
ENSCING00000014236	-	100	65.464	ENSCSAVG00000008777	-	100	65.464	Ciona_savignyi
ENSCING00000014236	-	51	58.947	ENSCANG00000003652	MRPS12	62	63.953	Colobus_angolensis_palliatus
ENSCING00000014236	-	71	48.872	ENSCGRG00001018968	Mrps12	62	65.116	Cricetulus_griseus_chok1gshd
ENSCING00000014236	-	71	48.872	ENSCGRG00000007113	Mrps12	62	65.116	Cricetulus_griseus_crigri
ENSCING00000014236	-	73	48.921	ENSCSEG00000001174	si:dkey-17e16.10	59	69.412	Cynoglossus_semilaevis
ENSCING00000014236	-	64	53.659	ENSCVAG00000003253	si:dkey-17e16.10	59	68.235	Cyprinodon_variegatus
ENSCING00000014236	-	66	52.344	ENSDARG00000089836	MRPS12	59	68.235	Danio_rerio
ENSCING00000014236	-	61	50.000	FBgn0003714	tko	84	50.000	Drosophila_melanogaster
ENSCING00000014236	-	51	57.895	ENSFDAG00000008482	MRPS12	62	63.953	Fukomys_damarensis
ENSCING00000014236	-	67	52.713	ENSFHEG00000004575	si:dkey-17e16.10	60	68.235	Fundulus_heteroclitus
ENSCING00000014236	-	51	57.895	ENSGGOG00000002500	MRPS12	62	62.791	Gorilla_gorilla
ENSCING00000014236	-	66	52.381	ENSHBUG00000014480	si:dkey-17e16.10	60	68.235	Haplochromis_burtoni
ENSCING00000014236	-	70	49.630	ENSKMAG00000007949	si:dkey-17e16.10	54	69.412	Kryptolebias_marmoratus
ENSCING00000014236	-	61	55.085	ENSLBEG00000001112	si:dkey-17e16.10	61	68.235	Labrus_bergylta
ENSCING00000014236	-	51	60.000	ENSMFAG00000044563	MRPS12	62	65.116	Macaca_fascicularis
ENSCING00000014236	-	51	58.947	ENSMNEG00000040379	MRPS12	62	63.953	Macaca_nemestrina
ENSCING00000014236	-	51	58.947	ENSMLEG00000036963	MRPS12	62	63.953	Mandrillus_leucophaeus
ENSCING00000014236	-	72	51.095	ENSMAMG00000017962	si:dkey-17e16.10	61	70.588	Mastacembelus_armatus
ENSCING00000014236	-	70	49.630	ENSMZEG00005017336	si:dkey-17e16.10	59	68.235	Maylandia_zebra
ENSCING00000014236	-	72	48.120	ENSMOCG00000012666	Mrps12	64	66.279	Microtus_ochrogaster
ENSCING00000014236	-	72	48.921	ENSMODG00000013431	MRPS12	60	63.218	Monodelphis_domestica
ENSCING00000014236	-	53	59.596	MGP_PahariEiJ_G0012691	Mrps12	64	67.500	Mus_pahari
ENSCING00000014236	-	70	49.630	ENSNBRG00000007244	si:dkey-17e16.10	59	68.235	Neolamprologus_brichardi
ENSCING00000014236	-	51	61.053	ENSODEG00000016161	MRPS12	65	65.116	Octodon_degus
ENSCING00000014236	-	70	49.630	ENSONIG00000002022	si:dkey-17e16.10	59	68.235	Oreochromis_niloticus
ENSCING00000014236	-	64	54.472	ENSOMEG00000001427	si:dkey-17e16.10	61	69.412	Oryzias_melastigma
ENSCING00000014236	-	51	57.895	ENSPPAG00000041637	MRPS12	62	62.791	Pan_paniscus
ENSCING00000014236	-	51	57.895	ENSPTRG00000010948	MRPS12	62	62.791	Pan_troglodytes
ENSCING00000014236	-	51	58.947	ENSPANG00000021673	MRPS12	62	63.953	Papio_anubis
ENSCING00000014236	-	51	57.895	ENSPPYG00000009950	MRPS12	62	62.791	Pongo_abelii
ENSCING00000014236	-	51	60.000	ENSPCAG00000010853	MRPS12	62	63.953	Procavia_capensis
ENSCING00000014236	-	58	55.856	ENSPCOG00000020370	MRPS12	62	67.442	Propithecus_coquereli
ENSCING00000014236	-	76	47.260	ENSPNYG00000015506	si:dkey-17e16.10	56	68.235	Pundamilia_nyererei
ENSCING00000014236	-	51	58.947	ENSRBIG00000029741	MRPS12	62	63.953	Rhinopithecus_bieti
ENSCING00000014236	-	51	58.947	ENSRROG00000030787	MRPS12	62	63.953	Rhinopithecus_roxellana
ENSCING00000014236	-	51	57.895	ENSSBOG00000025707	MRPS12	62	62.791	Saimiri_boliviensis_boliviensis
ENSCING00000014236	-	70	51.111	ENSSMAG00000004249	si:dkey-17e16.10	59	69.412	Scophthalmus_maximus
ENSCING00000014236	-	70	49.630	ENSSDUG00000020424	si:dkey-17e16.10	58	67.857	Seriola_dumerili
ENSCING00000014236	-	75	47.945	ENSSLDG00000016320	si:dkey-17e16.10	58	67.857	Seriola_lalandi_dorsalis
ENSCING00000014236	-	51	59.574	ENSSARG00000006985	MRPS12	61	64.706	Sorex_araneus
ENSCING00000014236	-	55	58.252	ENSSPUG00000004675	MRPS12	56	67.442	Sphenodon_punctatus
ENSCING00000014236	-	70	50.370	ENSSPAG00000012951	si:dkey-17e16.10	59	69.412	Stegastes_partitus
ENSCING00000014236	-	52	58.763	ENSTGUG00000016491	MRPS12	72	69.620	Taeniopygia_guttata