EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014454 (Gene tree)
Gene ID: 100181024
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1452 bases
Position: chr14:2859693-2861144
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000026142	TUDOR	PF00567.24	0.0002	1	1
ENSCINP00000026142	SMN	PF06003.12	3.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000026388	-	820	-	ENSCINP00000026142	248 (aa)	-	F6YAV6

Gene Model

Click here to download ENSCING00000014454's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014454	-	66	32.544	ENSANAG00000032133	-	62	31.677	Aotus_nancymaae
ENSCING00000014454	-	92	48.945	ENSCSAVG00000008390	-	86	50.628	Ciona_savignyi
ENSCING00000014454	-	77	30.052	ENSLBEG00000022550	smn1	61	30.583	Labrus_bergylta
ENSCING00000014454	-	75	30.729	ENSMICG00000034708	-	82	30.876	Microcebus_murinus
ENSCING00000014454	-	79	32.367	ENSPCOG00000022307	-	85	31.579	Propithecus_coquereli