EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014465 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 17679 bases
Position: chr14:2664601-2682279
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000026155	CSD	PF00313.22	8.2e-64	1	5
ENSCINP00000026155	CSD	PF00313.22	8.2e-64	2	5
ENSCINP00000026155	CSD	PF00313.22	8.2e-64	3	5
ENSCINP00000026155	CSD	PF00313.22	8.2e-64	4	5
ENSCINP00000026155	CSD	PF00313.22	8.2e-64	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000026401	-	3740	-	ENSCINP00000026155	840 (aa)	-	F6YAH3

Gene Model

Click here to download ENSCING00000014465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014465	-	96	43.032	ENSG00000009307	CSDE1	97	50.746	Homo_sapiens
ENSCING00000014465	-	98	42.379	ENSAPOG00000015538	csde1	98	43.011	Acanthochromis_polyacanthus
ENSCING00000014465	-	95	41.697	ENSAMEG00000017129	CSDE1	91	41.697	Ailuropoda_melanoleuca
ENSCING00000014465	-	87	43.490	ENSACIG00000015175	csde1	99	43.490	Amphilophus_citrinellus
ENSCING00000014465	-	98	41.714	ENSAOCG00000011510	csde1	97	42.611	Amphiprion_ocellaris
ENSCING00000014465	-	98	41.714	ENSAPEG00000007194	csde1	98	43.165	Amphiprion_percula
ENSCING00000014465	-	96	42.577	ENSATEG00000003864	csde1	97	42.577	Anabas_testudineus
ENSCING00000014465	-	96	41.481	ENSAPLG00000008797	CSDE1	97	41.481	Anas_platyrhynchos
ENSCING00000014465	-	98	43.505	ENSACAG00000003120	CSDE1	97	43.505	Anolis_carolinensis
ENSCING00000014465	-	96	42.735	ENSANAG00000024665	CSDE1	90	46.296	Aotus_nancymaae
ENSCING00000014465	-	61	38.028	ENSANAG00000028396	-	88	38.028	Aotus_nancymaae
ENSCING00000014465	-	96	43.190	ENSACLG00000013296	csde1	98	43.436	Astatotilapia_calliptera
ENSCING00000014465	-	96	42.717	ENSAMXG00000007436	csde1	97	42.717	Astyanax_mexicanus
ENSCING00000014465	-	96	43.049	ENSBTAG00000000678	CSDE1	97	41.963	Bos_taurus
ENSCING00000014465	-	96	42.857	ENSCJAG00000012565	CSDE1	92	42.857	Callithrix_jacchus
ENSCING00000014465	-	95	42.269	ENSCAFG00000009618	CSDE1	92	42.269	Canis_familiaris
ENSCING00000014465	-	96	42.189	ENSCAFG00020000481	CSDE1	97	42.189	Canis_lupus_dingo
ENSCING00000014465	-	96	43.049	ENSCHIG00000017250	CSDE1	97	41.963	Capra_hircus
ENSCING00000014465	-	96	43.032	ENSTSYG00000003747	CSDE1	97	43.032	Carlito_syrichta
ENSCING00000014465	-	95	35.662	ENSCAPG00000015128	CSDE1	97	35.662	Cavia_aperea
ENSCING00000014465	-	96	41.082	ENSCPOG00000040388	CSDE1	97	41.082	Cavia_porcellus
ENSCING00000014465	-	96	42.857	ENSCCAG00000036794	CSDE1	97	42.857	Cebus_capucinus
ENSCING00000014465	-	97	31.858	ENSCCAG00000030878	-	86	31.858	Cebus_capucinus
ENSCING00000014465	-	96	43.032	ENSCATG00000036962	CSDE1	94	41.943	Cercocebus_atys
ENSCING00000014465	-	96	42.787	ENSCLAG00000006618	CSDE1	97	42.787	Chinchilla_lanigera
ENSCING00000014465	-	96	43.032	ENSCSAG00000001658	CSDE1	92	43.032	Chlorocebus_sabaeus
ENSCING00000014465	-	90	52.128	ENSCHOG00000000918	CSDE1	74	52.128	Choloepus_hoffmanni
ENSCING00000014465	-	96	43.067	ENSCPBG00000016547	CSDE1	97	43.067	Chrysemys_picta_bellii
ENSCING00000014465	-	96	82.295	ENSCSAVG00000008100	-	100	82.295	Ciona_savignyi
ENSCING00000014465	-	89	45.221	ENSCANG00000031069	-	93	45.221	Colobus_angolensis_palliatus
ENSCING00000014465	-	96	43.032	ENSCANG00000035096	CSDE1	94	41.943	Colobus_angolensis_palliatus
ENSCING00000014465	-	96	42.665	ENSCGRG00001016833	-	97	42.665	Cricetulus_griseus_chok1gshd
ENSCING00000014465	-	97	33.087	ENSCGRG00001014011	-	97	33.087	Cricetulus_griseus_chok1gshd
ENSCING00000014465	-	96	41.026	ENSCGRG00000002225	-	98	41.026	Cricetulus_griseus_crigri
ENSCING00000014465	-	97	31.398	ENSCGRG00000005831	-	97	31.398	Cricetulus_griseus_crigri
ENSCING00000014465	-	98	42.561	ENSCSEG00000002620	csde1	97	42.769	Cynoglossus_semilaevis
ENSCING00000014465	-	98	42.353	ENSCVAG00000001344	csde1	98	43.276	Cyprinodon_variegatus
ENSCING00000014465	-	96	43.049	ENSDARG00000074758	csde1	96	47.445	Danio_rerio
ENSCING00000014465	-	96	41.697	ENSDNOG00000010287	-	90	41.697	Dasypus_novemcinctus
ENSCING00000014465	-	55	32.900	ENSDNOG00000034464	-	92	32.900	Dasypus_novemcinctus
ENSCING00000014465	-	96	42.543	ENSDORG00000011609	Csde1	98	41.968	Dipodomys_ordii
ENSCING00000014465	-	98	41.434	FBgn0263352	Unr	79	40.445	Drosophila_melanogaster
ENSCING00000014465	-	91	31.280	ENSETEG00000007109	-	97	31.280	Echinops_telfairi
ENSCING00000014465	-	89	37.519	ENSETEG00000006280	-	97	37.519	Echinops_telfairi
ENSCING00000014465	-	95	32.286	ENSETEG00000013678	-	95	32.286	Echinops_telfairi
ENSCING00000014465	-	94	52.128	ENSETEG00000002491	-	70	52.128	Echinops_telfairi
ENSCING00000014465	-	96	42.176	ENSEBUG00000008647	csde1	98	41.044	Eptatretus_burgeri
ENSCING00000014465	-	96	43.399	ENSEASG00005006284	CSDE1	97	43.399	Equus_asinus_asinus
ENSCING00000014465	-	96	43.399	ENSECAG00000020885	CSDE1	97	43.399	Equus_caballus
ENSCING00000014465	-	91	43.314	ENSEEUG00000006286	CSDE1	73	43.314	Erinaceus_europaeus
ENSCING00000014465	-	98	41.686	ENSELUG00000015507	csde1	98	41.425	Esox_lucius
ENSCING00000014465	-	96	43.276	ENSFCAG00000029266	CSDE1	97	42.189	Felis_catus
ENSCING00000014465	-	98	42.962	ENSFALG00000003407	CSDE1	97	42.962	Ficedula_albicollis
ENSCING00000014465	-	96	42.665	ENSFDAG00000007882	CSDE1	98	42.113	Fukomys_damarensis
ENSCING00000014465	-	96	43.926	ENSFHEG00000010799	csde1	98	43.926	Fundulus_heteroclitus
ENSCING00000014465	-	96	42.563	ENSGMOG00000012731	csde1	99	42.563	Gadus_morhua
ENSCING00000014465	-	95	42.662	ENSGALG00000002139	CSDE1	96	42.662	Gallus_gallus
ENSCING00000014465	-	90	41.810	ENSGAFG00000005241	csde1	94	41.810	Gambusia_affinis
ENSCING00000014465	-	96	43.190	ENSGACG00000004544	csde1	98	43.190	Gasterosteus_aculeatus
ENSCING00000014465	-	96	43.190	ENSGAGG00000017685	CSDE1	97	43.190	Gopherus_agassizii
ENSCING00000014465	-	96	43.032	ENSGGOG00000002164	CSDE1	98	41.147	Gorilla_gorilla
ENSCING00000014465	-	98	41.951	ENSHBUG00000020315	csde1	98	42.280	Haplochromis_burtoni
ENSCING00000014465	-	96	37.174	ENSHGLG00000010039	-	97	37.174	Heterocephalus_glaber_female
ENSCING00000014465	-	96	38.158	ENSHGLG00000008555	-	98	38.158	Heterocephalus_glaber_female
ENSCING00000014465	-	94	37.358	ENSHGLG00000007471	-	95	37.358	Heterocephalus_glaber_female
ENSCING00000014465	-	95	38.725	ENSHGLG00000003829	-	97	38.725	Heterocephalus_glaber_female
ENSCING00000014465	-	96	39.902	ENSHGLG00000009620	-	97	40.147	Heterocephalus_glaber_female
ENSCING00000014465	-	96	37.961	ENSHGLG00000019549	-	97	37.961	Heterocephalus_glaber_female
ENSCING00000014465	-	94	36.183	ENSHGLG00000000650	-	97	36.183	Heterocephalus_glaber_female
ENSCING00000014465	-	95	37.073	ENSHGLG00100002245	-	97	37.073	Heterocephalus_glaber_male
ENSCING00000014465	-	98	35.285	ENSHGLG00100001846	-	98	35.285	Heterocephalus_glaber_male
ENSCING00000014465	-	91	36.209	ENSHGLG00100004195	-	97	36.209	Heterocephalus_glaber_male
ENSCING00000014465	-	94	37.915	ENSHGLG00100012072	-	97	37.915	Heterocephalus_glaber_male
ENSCING00000014465	-	96	37.375	ENSHGLG00100007287	-	94	37.375	Heterocephalus_glaber_male
ENSCING00000014465	-	96	35.684	ENSHGLG00100004833	-	98	35.684	Heterocephalus_glaber_male
ENSCING00000014465	-	96	42.787	ENSHGLG00100019438	-	97	42.787	Heterocephalus_glaber_male
ENSCING00000014465	-	96	36.957	ENSHGLG00100006910	-	97	36.957	Heterocephalus_glaber_male
ENSCING00000014465	-	98	42.068	ENSHCOG00000004158	csde1	98	41.872	Hippocampus_comes
ENSCING00000014465	-	96	43.171	ENSIPUG00000000355	csde1	97	43.171	Ictalurus_punctatus
ENSCING00000014465	-	87	38.645	ENSSTOG00000032722	-	95	38.645	Ictidomys_tridecemlineatus
ENSCING00000014465	-	94	36.954	ENSSTOG00000030994	-	94	36.954	Ictidomys_tridecemlineatus
ENSCING00000014465	-	96	42.421	ENSJJAG00000019571	Csde1	98	41.823	Jaculus_jaculus
ENSCING00000014465	-	96	43.941	ENSKMAG00000005685	csde1	97	43.727	Kryptolebias_marmoratus
ENSCING00000014465	-	98	42.445	ENSLBEG00000014770	csde1	97	43.050	Labrus_bergylta
ENSCING00000014465	-	96	42.874	ENSLACG00000018452	CSDE1	93	42.637	Latimeria_chalumnae
ENSCING00000014465	-	96	44.045	ENSLOCG00000010413	csde1	92	44.045	Lepisosteus_oculatus
ENSCING00000014465	-	96	41.328	ENSLAFG00000007150	CSDE1	93	41.328	Loxodonta_africana
ENSCING00000014465	-	96	43.032	ENSMFAG00000003674	CSDE1	97	41.943	Macaca_fascicularis
ENSCING00000014465	-	96	43.032	ENSMMUG00000001974	CSDE1	97	42.216	Macaca_mulatta
ENSCING00000014465	-	96	43.032	ENSMNEG00000045247	CSDE1	94	41.943	Macaca_nemestrina
ENSCING00000014465	-	96	42.787	ENSMLEG00000038673	CSDE1	92	42.787	Mandrillus_leucophaeus
ENSCING00000014465	-	98	42.775	ENSMAMG00000008821	csde1	98	42.649	Mastacembelus_armatus
ENSCING00000014465	-	98	41.774	ENSMZEG00005021675	csde1	97	42.047	Maylandia_zebra
ENSCING00000014465	-	95	42.537	ENSMGAG00000016381	CSDE1	96	42.537	Meleagris_gallopavo
ENSCING00000014465	-	96	42.665	ENSMAUG00000014031	Csde1	98	42.113	Mesocricetus_auratus
ENSCING00000014465	-	96	42.927	ENSMICG00000002050	CSDE1	97	41.239	Microcebus_murinus
ENSCING00000014465	-	96	42.543	ENSMOCG00000018960	Csde1	97	42.543	Microtus_ochrogaster
ENSCING00000014465	-	96	42.170	ENSMMOG00000015075	csde1	97	42.170	Mola_mola
ENSCING00000014465	-	96	43.276	ENSMODG00000004685	CSDE1	97	43.276	Monodelphis_domestica
ENSCING00000014465	-	96	42.909	ENSMALG00000007132	csde1	98	42.909	Monopterus_albus
ENSCING00000014465	-	96	42.787	MGP_CAROLIEiJ_G0025444	Csde1	97	49.664	Mus_caroli
ENSCING00000014465	-	96	42.665	ENSMUSG00000068823	Csde1	97	49.664	Mus_musculus
ENSCING00000014465	-	96	42.543	MGP_PahariEiJ_G0026888	Csde1	97	49.664	Mus_pahari
ENSCING00000014465	-	96	42.543	MGP_SPRETEiJ_G0026394	Csde1	97	49.664	Mus_spretus
ENSCING00000014465	-	95	43.371	ENSMPUG00000005753	CSDE1	98	43.371	Mustela_putorius_furo
ENSCING00000014465	-	96	42.189	ENSMLUG00000005681	CSDE1	92	42.189	Myotis_lucifugus
ENSCING00000014465	-	96	42.543	ENSNGAG00000021929	Csde1	98	41.968	Nannospalax_galili
ENSCING00000014465	-	96	41.800	ENSNBRG00000020808	csde1	97	42.047	Neolamprologus_brichardi
ENSCING00000014465	-	96	43.032	ENSNLEG00000004842	CSDE1	94	41.943	Nomascus_leucogenys
ENSCING00000014465	-	95	52.128	ENSMEUG00000002677	CSDE1	98	52.128	Notamacropus_eugenii
ENSCING00000014465	-	95	52.128	ENSOPRG00000005002	CSDE1	72	52.128	Ochotona_princeps
ENSCING00000014465	-	96	42.421	ENSODEG00000007383	-	98	41.823	Octodon_degus
ENSCING00000014465	-	94	32.489	ENSODEG00000005979	-	95	32.812	Octodon_degus
ENSCING00000014465	-	96	42.377	ENSONIG00000009309	csde1	98	42.617	Oreochromis_niloticus
ENSCING00000014465	-	91	44.237	ENSOANG00000003346	-	72	44.237	Ornithorhynchus_anatinus
ENSCING00000014465	-	96	43.154	ENSOCUG00000016438	CSDE1	92	43.154	Oryctolagus_cuniculus
ENSCING00000014465	-	96	42.926	ENSORLG00000000707	csde1	98	42.926	Oryzias_latipes
ENSCING00000014465	-	98	42.925	ENSORLG00020005148	csde1	98	42.806	Oryzias_latipes_hni
ENSCING00000014465	-	98	43.160	ENSORLG00015019415	csde1	98	43.046	Oryzias_latipes_hsok
ENSCING00000014465	-	98	43.463	ENSOMEG00000015656	csde1	98	43.473	Oryzias_melastigma
ENSCING00000014465	-	96	41.943	ENSOGAG00000012127	CSDE1	92	41.943	Otolemur_garnettii
ENSCING00000014465	-	96	41.963	ENSOARG00000020034	CSDE1	92	41.963	Ovis_aries
ENSCING00000014465	-	96	43.032	ENSPPAG00000025861	CSDE1	97	41.943	Pan_paniscus
ENSCING00000014465	-	96	43.276	ENSPPRG00000006747	CSDE1	92	43.276	Panthera_pardus
ENSCING00000014465	-	96	43.276	ENSPTIG00000015468	CSDE1	97	43.276	Panthera_tigris_altaica
ENSCING00000014465	-	96	43.032	ENSPTRG00000033721	CSDE1	97	43.032	Pan_troglodytes
ENSCING00000014465	-	96	43.032	ENSPANG00000018873	CSDE1	97	41.943	Papio_anubis
ENSCING00000014465	-	97	42.220	ENSPKIG00000009459	csde1	99	42.220	Paramormyrops_kingsleyae
ENSCING00000014465	-	91	47.111	ENSPSIG00000003823	CSDE1	94	47.111	Pelodiscus_sinensis
ENSCING00000014465	-	96	43.050	ENSPMGG00000000772	csde1	97	43.050	Periophthalmus_magnuspinnatus
ENSCING00000014465	-	96	42.665	ENSPEMG00000020357	-	98	41.968	Peromyscus_maniculatus_bairdii
ENSCING00000014465	-	96	43.399	ENSPCIG00000022587	CSDE1	97	43.399	Phascolarctos_cinereus
ENSCING00000014465	-	96	41.704	ENSPFOG00000012664	csde1	99	41.704	Poecilia_formosa
ENSCING00000014465	-	95	39.385	ENSPLAG00000017680	csde1	96	39.385	Poecilia_latipinna
ENSCING00000014465	-	95	39.478	ENSPMEG00000005094	csde1	96	39.478	Poecilia_mexicana
ENSCING00000014465	-	98	42.371	ENSPREG00000011631	csde1	98	42.099	Poecilia_reticulata
ENSCING00000014465	-	96	43.154	ENSPPYG00000000996	CSDE1	97	43.154	Pongo_abelii
ENSCING00000014465	-	96	40.909	ENSPCAG00000014368	CSDE1	92	40.909	Procavia_capensis
ENSCING00000014465	-	96	42.927	ENSPCOG00000017893	CSDE1	97	42.927	Propithecus_coquereli
ENSCING00000014465	-	89	39.781	ENSPCOG00000008223	-	91	39.781	Propithecus_coquereli
ENSCING00000014465	-	90	42.216	ENSPVAG00000008225	CSDE1	85	42.216	Pteropus_vampyrus
ENSCING00000014465	-	96	42.043	ENSPNYG00000013745	csde1	98	42.280	Pundamilia_nyererei
ENSCING00000014465	-	98	42.924	ENSPNAG00000001958	csde1	97	43.399	Pygocentrus_nattereri
ENSCING00000014465	-	96	42.543	ENSRNOG00000061058	Csde1	97	42.543	Rattus_norvegicus
ENSCING00000014465	-	96	40.392	ENSRBIG00000038966	-	92	40.098	Rhinopithecus_bieti
ENSCING00000014465	-	97	41.146	ENSRBIG00000038088	-	99	41.125	Rhinopithecus_bieti
ENSCING00000014465	-	96	43.032	ENSRROG00000043101	CSDE1	94	41.943	Rhinopithecus_roxellana
ENSCING00000014465	-	96	42.857	ENSSBOG00000035592	CSDE1	92	42.857	Saimiri_boliviensis_boliviensis
ENSCING00000014465	-	96	42.312	ENSSHAG00000009831	CSDE1	97	42.312	Sarcophilus_harrisii
ENSCING00000014465	-	98	42.317	ENSSFOG00015007498	csde1	99	42.363	Scleropages_formosus
ENSCING00000014465	-	96	42.771	ENSSMAG00000007203	csde1	98	42.771	Scophthalmus_maximus
ENSCING00000014465	-	98	42.227	ENSSDUG00000015380	csde1	97	42.787	Seriola_dumerili
ENSCING00000014465	-	98	43.093	ENSSLDG00000008819	csde1	98	44.049	Seriola_lalandi_dorsalis
ENSCING00000014465	-	98	41.328	ENSSARG00000000738	CSDE1	91	41.328	Sorex_araneus
ENSCING00000014465	-	98	43.280	ENSSPUG00000008714	CSDE1	97	43.280	Sphenodon_punctatus
ENSCING00000014465	-	98	42.590	ENSSPAG00000000716	csde1	97	42.663	Stegastes_partitus
ENSCING00000014465	-	96	43.276	ENSSSCG00000006752	CSDE1	97	42.189	Sus_scrofa
ENSCING00000014465	-	98	42.472	ENSTGUG00000000972	CSDE1	97	42.472	Taeniopygia_guttata
ENSCING00000014465	-	95	42.203	ENSTRUG00000007996	csde1	97	42.203	Takifugu_rubripes
ENSCING00000014465	-	90	49.802	ENSTNIG00000010878	csde1	95	49.802	Tetraodon_nigroviridis
ENSCING00000014465	-	96	41.963	ENSTTRG00000015583	CSDE1	92	41.963	Tursiops_truncatus
ENSCING00000014465	-	87	39.766	ENSUAMG00000024289	-	98	39.766	Ursus_americanus
ENSCING00000014465	-	84	47.727	ENSUAMG00000021779	-	97	47.727	Ursus_americanus
ENSCING00000014465	-	96	39.627	ENSUMAG00000009720	-	94	39.627	Ursus_maritimus
ENSCING00000014465	-	96	40.271	ENSUMAG00000011714	-	97	40.271	Ursus_maritimus
ENSCING00000014465	-	95	45.581	ENSVPAG00000000749	CSDE1	73	45.581	Vicugna_pacos
ENSCING00000014465	-	91	42.411	ENSVVUG00000009890	CSDE1	92	42.411	Vulpes_vulpes
ENSCING00000014465	-	96	44.214	ENSXETG00000021448	csde1	97	44.214	Xenopus_tropicalis
ENSCING00000014465	-	90	51.667	ENSXCOG00000000035	csde1	97	51.667	Xiphophorus_couchianus
ENSCING00000014465	-	98	42.606	ENSXMAG00000009080	csde1	98	42.840	Xiphophorus_maculatus