EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014892 (Gene tree)
Gene ID: 101243418
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L13a-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3450 bases
Position: chr6:655865-659314
Accession: 101243418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000026731	Ribosomal_L13	PF00572.18	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000026977	-	654	XM_004226094	ENSCINP00000026731	206 (aa)	XP_004226142	F6YRR0

Gene Model

Click here to download ENSCING00000014892's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014892	-	96	64.467	ENSG00000142541	RPL13A	97	64.467	Homo_sapiens
ENSCING00000014892	-	99	64.532	ENSAPOG00000014084	rpl13a	99	64.532	Acanthochromis_polyacanthus
ENSCING00000014892	-	98	63.861	ENSAMEG00000014027	RPL13A	99	63.861	Ailuropoda_melanoleuca
ENSCING00000014892	-	99	62.069	ENSACIG00000004871	rpl13a	98	65.816	Amphilophus_citrinellus
ENSCING00000014892	-	99	64.039	ENSAOCG00000002123	rpl13a	99	64.039	Amphiprion_ocellaris
ENSCING00000014892	-	99	64.039	ENSAPEG00000018777	rpl13a	99	64.039	Amphiprion_percula
ENSCING00000014892	-	99	64.039	ENSATEG00000012828	rpl13a	99	64.039	Anabas_testudineus
ENSCING00000014892	-	96	65.482	ENSACAG00000017279	RPL13A	97	65.482	Anolis_carolinensis
ENSCING00000014892	-	96	64.467	ENSANAG00000030530	RPL13A	97	64.467	Aotus_nancymaae
ENSCING00000014892	-	69	60.839	ENSANAG00000013769	-	99	60.839	Aotus_nancymaae
ENSCING00000014892	-	96	55.556	ENSANAG00000020868	-	97	55.556	Aotus_nancymaae
ENSCING00000014892	-	88	59.890	ENSANAG00000021423	-	94	59.890	Aotus_nancymaae
ENSCING00000014892	-	58	57.600	ENSANAG00000037443	-	88	57.600	Aotus_nancymaae
ENSCING00000014892	-	99	65.025	ENSACLG00000016552	rpl13a	99	65.025	Astatotilapia_calliptera
ENSCING00000014892	-	99	62.562	ENSAMXG00000033532	rpl13a	99	62.562	Astyanax_mexicanus
ENSCING00000014892	-	98	62.871	ENSBTAG00000005296	RPL13A	99	62.871	Bos_taurus
ENSCING00000014892	-	94	53.886	WBGene00004428	rpl-16	95	53.886	Caenorhabditis_elegans
ENSCING00000014892	-	96	60.914	ENSCJAG00000046649	-	97	60.914	Callithrix_jacchus
ENSCING00000014892	-	81	61.850	ENSCJAG00000008837	-	98	61.850	Callithrix_jacchus
ENSCING00000014892	-	96	64.467	ENSCJAG00000000072	-	97	64.467	Callithrix_jacchus
ENSCING00000014892	-	96	62.944	ENSCJAG00000040678	-	97	62.944	Callithrix_jacchus
ENSCING00000014892	-	98	63.861	ENSCAFG00000029892	RPL13A	99	63.861	Canis_familiaris
ENSCING00000014892	-	84	46.821	ENSCAFG00000003946	-	87	46.821	Canis_familiaris
ENSCING00000014892	-	98	63.861	ENSCAFG00020024917	-	99	63.861	Canis_lupus_dingo
ENSCING00000014892	-	98	59.901	ENSCHIG00000012581	-	98	59.901	Capra_hircus
ENSCING00000014892	-	98	62.871	ENSCHIG00000021732	-	99	62.871	Capra_hircus
ENSCING00000014892	-	82	54.438	ENSTSYG00000028115	-	92	50.532	Carlito_syrichta
ENSCING00000014892	-	98	63.861	ENSTSYG00000008791	-	99	63.861	Carlito_syrichta
ENSCING00000014892	-	95	64.615	ENSCAPG00000007267	RPL13A	98	64.615	Cavia_aperea
ENSCING00000014892	-	61	76.000	ENSCPOG00000023083	-	59	73.684	Cavia_porcellus
ENSCING00000014892	-	98	63.861	ENSCPOG00000012417	RPL13A	99	63.861	Cavia_porcellus
ENSCING00000014892	-	95	60.914	ENSCCAG00000034479	-	98	60.914	Cebus_capucinus
ENSCING00000014892	-	96	64.467	ENSCCAG00000022898	RPL13A	97	64.467	Cebus_capucinus
ENSCING00000014892	-	66	69.118	ENSCCAG00000020555	-	98	69.118	Cebus_capucinus
ENSCING00000014892	-	66	73.529	ENSCCAG00000029220	-	94	73.529	Cebus_capucinus
ENSCING00000014892	-	96	64.467	ENSCATG00000011576	RPL13A	97	64.467	Cercocebus_atys
ENSCING00000014892	-	98	64.356	ENSCLAG00000012323	RPL13A	99	64.356	Chinchilla_lanigera
ENSCING00000014892	-	96	62.944	ENSCSAG00000019054	-	97	62.944	Chlorocebus_sabaeus
ENSCING00000014892	-	96	64.141	ENSCPBG00000014922	RPL13A	93	64.141	Chrysemys_picta_bellii
ENSCING00000014892	-	100	90.291	ENSCSAVG00000000666	-	100	90.291	Ciona_savignyi
ENSCING00000014892	-	96	64.467	ENSCANG00000040885	-	97	64.467	Colobus_angolensis_palliatus
ENSCING00000014892	-	78	61.963	ENSCANG00000018732	-	98	61.963	Colobus_angolensis_palliatus
ENSCING00000014892	-	96	63.452	ENSCANG00000000304	-	97	63.452	Colobus_angolensis_palliatus
ENSCING00000014892	-	98	63.366	ENSCGRG00001018651	-	99	63.366	Cricetulus_griseus_chok1gshd
ENSCING00000014892	-	98	63.366	ENSCGRG00000005890	-	99	63.366	Cricetulus_griseus_crigri
ENSCING00000014892	-	97	57.500	ENSCSEG00000002640	rpl13a	97	57.500	Cynoglossus_semilaevis
ENSCING00000014892	-	99	56.158	ENSCVAG00000011043	rpl13a	99	56.158	Cyprinodon_variegatus
ENSCING00000014892	-	99	65.517	ENSDARG00000044093	rpl13a	99	65.517	Danio_rerio
ENSCING00000014892	-	98	63.366	ENSDNOG00000035370	-	99	63.366	Dasypus_novemcinctus
ENSCING00000014892	-	98	62.376	ENSDORG00000012194	-	99	62.376	Dipodomys_ordii
ENSCING00000014892	-	94	52.332	FBgn0037351	RpL13A	94	52.332	Drosophila_melanogaster
ENSCING00000014892	-	66	73.529	ENSETEG00000017076	-	66	73.529	Echinops_telfairi
ENSCING00000014892	-	98	60.396	ENSETEG00000005732	-	99	60.396	Echinops_telfairi
ENSCING00000014892	-	99	59.113	ENSEBUG00000007234	rpl13a	99	60.753	Eptatretus_burgeri
ENSCING00000014892	-	95	64.615	ENSEASG00005005007	RPL13A	84	64.615	Equus_asinus_asinus
ENSCING00000014892	-	98	63.861	ENSECAG00000015832	RPL13A	99	63.861	Equus_caballus
ENSCING00000014892	-	72	62.162	ENSEEUG00000014071	RPL13A	73	62.162	Erinaceus_europaeus
ENSCING00000014892	-	99	62.069	ENSELUG00000014577	rpl13a	99	62.069	Esox_lucius
ENSCING00000014892	-	95	64.286	ENSFCAG00000009194	RPL13A	97	64.286	Felis_catus
ENSCING00000014892	-	98	63.861	ENSFDAG00000016892	RPL13A	99	63.861	Fukomys_damarensis
ENSCING00000014892	-	99	64.039	ENSFHEG00000004165	rpl13a	99	64.039	Fundulus_heteroclitus
ENSCING00000014892	-	96	62.121	ENSGMOG00000010791	rpl13a	93	62.121	Gadus_morhua
ENSCING00000014892	-	99	64.039	ENSGAFG00000007578	rpl13a	99	64.039	Gambusia_affinis
ENSCING00000014892	-	97	63.819	ENSGACG00000009310	rpl13a	99	63.819	Gasterosteus_aculeatus
ENSCING00000014892	-	89	62.162	ENSGAGG00000002437	RPL13A	71	62.162	Gopherus_agassizii
ENSCING00000014892	-	66	68.382	ENSGGOG00000039250	-	82	68.382	Gorilla_gorilla
ENSCING00000014892	-	65	70.677	ENSGGOG00000039904	-	71	70.677	Gorilla_gorilla
ENSCING00000014892	-	96	64.467	ENSGGOG00000002932	RPL13A	97	64.467	Gorilla_gorilla
ENSCING00000014892	-	96	63.959	ENSGGOG00000023324	-	97	63.959	Gorilla_gorilla
ENSCING00000014892	-	99	65.025	ENSHBUG00000023575	rpl13a	99	65.025	Haplochromis_burtoni
ENSCING00000014892	-	98	63.861	ENSHGLG00000010070	RPL13A	99	63.861	Heterocephalus_glaber_female
ENSCING00000014892	-	98	63.861	ENSHGLG00100010359	RPL13A	99	63.861	Heterocephalus_glaber_male
ENSCING00000014892	-	99	63.054	ENSHCOG00000007902	rpl13a	99	63.054	Hippocampus_comes
ENSCING00000014892	-	96	62.437	ENSIPUG00000014098	rpl13a	93	62.437	Ictalurus_punctatus
ENSCING00000014892	-	95	64.615	ENSSTOG00000021558	RPL13A	98	64.615	Ictidomys_tridecemlineatus
ENSCING00000014892	-	98	63.366	ENSJJAG00000000343	-	99	63.366	Jaculus_jaculus
ENSCING00000014892	-	99	65.025	ENSKMAG00000009039	rpl13a	99	65.025	Kryptolebias_marmoratus
ENSCING00000014892	-	99	64.039	ENSLBEG00000005434	rpl13a	99	64.039	Labrus_bergylta
ENSCING00000014892	-	96	63.000	ENSLACG00000019092	RPL13A	97	63.184	Latimeria_chalumnae
ENSCING00000014892	-	99	64.532	ENSLOCG00000004388	rpl13a	99	64.532	Lepisosteus_oculatus
ENSCING00000014892	-	98	64.356	ENSLAFG00000016213	RPL13A	99	64.356	Loxodonta_africana
ENSCING00000014892	-	96	57.868	ENSMFAG00000003121	-	97	58.376	Macaca_fascicularis
ENSCING00000014892	-	96	64.467	ENSMFAG00000001097	-	97	64.467	Macaca_fascicularis
ENSCING00000014892	-	97	61.765	ENSMFAG00000002765	-	97	61.765	Macaca_fascicularis
ENSCING00000014892	-	97	61.275	ENSMMUG00000009018	-	97	61.275	Macaca_mulatta
ENSCING00000014892	-	96	64.467	ENSMMUG00000007551	RPL13A	98	64.286	Macaca_mulatta
ENSCING00000014892	-	96	64.467	ENSMNEG00000034977	RPL13A	97	64.467	Macaca_nemestrina
ENSCING00000014892	-	56	75.652	ENSMLEG00000038132	-	97	75.652	Mandrillus_leucophaeus
ENSCING00000014892	-	99	65.025	ENSMAMG00000007425	rpl13a	85	65.025	Mastacembelus_armatus
ENSCING00000014892	-	99	65.025	ENSMZEG00005004952	rpl13a	99	65.025	Maylandia_zebra
ENSCING00000014892	-	98	53.960	ENSMAUG00000012558	-	98	53.960	Mesocricetus_auratus
ENSCING00000014892	-	97	60.500	ENSMAUG00000020351	-	97	60.500	Mesocricetus_auratus
ENSCING00000014892	-	98	62.376	ENSMAUG00000016402	-	99	62.376	Mesocricetus_auratus
ENSCING00000014892	-	88	57.143	ENSMICG00000043457	-	94	57.143	Microcebus_murinus
ENSCING00000014892	-	98	63.861	ENSMICG00000009318	-	99	63.861	Microcebus_murinus
ENSCING00000014892	-	82	58.580	ENSMOCG00000016427	-	88	58.580	Microtus_ochrogaster
ENSCING00000014892	-	98	63.366	ENSMOCG00000002774	-	99	63.366	Microtus_ochrogaster
ENSCING00000014892	-	96	62.626	ENSMMOG00000010248	rpl13a	98	62.626	Mola_mola
ENSCING00000014892	-	99	65.025	ENSMALG00000012804	rpl13a	99	65.025	Monopterus_albus
ENSCING00000014892	-	98	63.861	MGP_CAROLIEiJ_G0029698	-	99	63.861	Mus_caroli
ENSCING00000014892	-	98	63.366	ENSMUSG00000074129	Rpl13a	91	72.059	Mus_musculus
ENSCING00000014892	-	98	63.861	MGP_PahariEiJ_G0012923	-	99	63.861	Mus_pahari
ENSCING00000014892	-	98	61.881	MGP_SPRETEiJ_G0017763	-	99	61.881	Mus_spretus
ENSCING00000014892	-	98	63.366	MGP_SPRETEiJ_G0030796	Rpl13a	99	63.366	Mus_spretus
ENSCING00000014892	-	98	63.861	ENSMPUG00000002604	RPL13A	99	63.861	Mustela_putorius_furo
ENSCING00000014892	-	95	64.286	ENSMLUG00000004945	RPL13A	97	64.286	Myotis_lucifugus
ENSCING00000014892	-	98	63.366	ENSNGAG00000021984	-	99	63.366	Nannospalax_galili
ENSCING00000014892	-	99	65.025	ENSNBRG00000024166	rpl13a	99	65.025	Neolamprologus_brichardi
ENSCING00000014892	-	96	58.586	ENSNLEG00000012957	-	96	58.586	Nomascus_leucogenys
ENSCING00000014892	-	94	61.658	ENSNLEG00000033213	-	96	61.658	Nomascus_leucogenys
ENSCING00000014892	-	96	58.000	ENSNLEG00000005211	RPL13A	97	58.000	Nomascus_leucogenys
ENSCING00000014892	-	83	57.647	ENSMEUG00000005199	RPL13A	98	57.647	Notamacropus_eugenii
ENSCING00000014892	-	98	59.406	ENSOPRG00000001194	RPL13A	99	59.406	Ochotona_princeps
ENSCING00000014892	-	98	62.376	ENSODEG00000020233	-	99	62.376	Octodon_degus
ENSCING00000014892	-	98	63.861	ENSODEG00000016831	-	99	63.861	Octodon_degus
ENSCING00000014892	-	98	63.366	ENSODEG00000019218	-	99	63.366	Octodon_degus
ENSCING00000014892	-	98	63.366	ENSODEG00000020468	-	99	63.366	Octodon_degus
ENSCING00000014892	-	99	65.025	ENSONIG00000003560	rpl13a	99	65.025	Oreochromis_niloticus
ENSCING00000014892	-	98	63.366	ENSOANG00000000828	RPL13A	99	63.366	Ornithorhynchus_anatinus
ENSCING00000014892	-	78	62.500	ENSOCUG00000026592	-	97	62.500	Oryctolagus_cuniculus
ENSCING00000014892	-	99	63.547	ENSORLG00000014599	rpl13a	89	63.547	Oryzias_latipes
ENSCING00000014892	-	99	63.547	ENSORLG00020013090	rpl13a	89	63.547	Oryzias_latipes_hni
ENSCING00000014892	-	99	63.547	ENSORLG00015011634	rpl13a	96	63.452	Oryzias_latipes_hsok
ENSCING00000014892	-	99	64.039	ENSOMEG00000010232	rpl13a	89	64.039	Oryzias_melastigma
ENSCING00000014892	-	98	59.406	ENSOGAG00000026177	-	99	59.406	Otolemur_garnettii
ENSCING00000014892	-	98	63.366	ENSOGAG00000004625	-	99	63.366	Otolemur_garnettii
ENSCING00000014892	-	98	61.084	ENSOGAG00000030280	-	99	61.084	Otolemur_garnettii
ENSCING00000014892	-	95	63.776	ENSOARG00000013169	-	96	63.776	Ovis_aries
ENSCING00000014892	-	97	50.000	ENSOARG00000017798	-	97	50.000	Ovis_aries
ENSCING00000014892	-	98	62.871	ENSOARG00000020159	-	99	62.871	Ovis_aries
ENSCING00000014892	-	65	70.677	ENSPPAG00000006023	-	70	70.677	Pan_paniscus
ENSCING00000014892	-	96	59.898	ENSPPAG00000019107	-	97	59.898	Pan_paniscus
ENSCING00000014892	-	96	62.437	ENSPPAG00000023659	-	97	62.437	Pan_paniscus
ENSCING00000014892	-	96	64.467	ENSPPAG00000037365	RPL13A	97	64.467	Pan_paniscus
ENSCING00000014892	-	95	64.286	ENSPPRG00000011265	RPL13A	97	64.286	Panthera_pardus
ENSCING00000014892	-	68	61.429	ENSPTRG00000042978	-	99	61.429	Pan_troglodytes
ENSCING00000014892	-	96	64.467	ENSPTRG00000011298	RPL13A	97	64.467	Pan_troglodytes
ENSCING00000014892	-	65	74.627	ENSPTRG00000052284	-	92	74.627	Pan_troglodytes
ENSCING00000014892	-	96	60.406	ENSPTRG00000049426	-	97	60.406	Pan_troglodytes
ENSCING00000014892	-	96	63.959	ENSPTRG00000050666	-	97	63.959	Pan_troglodytes
ENSCING00000014892	-	98	63.682	ENSPANG00000012050	RPL13A	98	63.682	Papio_anubis
ENSCING00000014892	-	99	65.517	ENSPKIG00000000720	rpl13a	99	65.517	Paramormyrops_kingsleyae
ENSCING00000014892	-	96	63.959	ENSPSIG00000018234	RPL13A	99	63.959	Pelodiscus_sinensis
ENSCING00000014892	-	96	63.959	ENSPMGG00000010552	rpl13a	95	63.959	Periophthalmus_magnuspinnatus
ENSCING00000014892	-	98	63.366	ENSPEMG00000009221	-	99	63.366	Peromyscus_maniculatus_bairdii
ENSCING00000014892	-	99	64.532	ENSPMAG00000006362	rpl13a	99	64.532	Petromyzon_marinus
ENSCING00000014892	-	98	64.851	ENSPCIG00000007340	-	99	64.851	Phascolarctos_cinereus
ENSCING00000014892	-	82	55.621	ENSPCIG00000014063	-	90	55.621	Phascolarctos_cinereus
ENSCING00000014892	-	99	64.039	ENSPFOG00000013546	rpl13a	99	64.039	Poecilia_formosa
ENSCING00000014892	-	99	64.039	ENSPLAG00000016066	rpl13a	99	64.039	Poecilia_latipinna
ENSCING00000014892	-	99	64.039	ENSPMEG00000018384	rpl13a	99	64.039	Poecilia_mexicana
ENSCING00000014892	-	99	64.039	ENSPREG00000020079	rpl13a	99	64.039	Poecilia_reticulata
ENSCING00000014892	-	96	64.467	ENSPPYG00000006798	-	97	64.467	Pongo_abelii
ENSCING00000014892	-	96	64.467	ENSPPYG00000010251	-	97	64.467	Pongo_abelii
ENSCING00000014892	-	100	63.592	ENSPCAG00000004086	RPL13A	99	63.592	Procavia_capensis
ENSCING00000014892	-	92	53.158	ENSPCOG00000016293	-	92	53.158	Propithecus_coquereli
ENSCING00000014892	-	98	63.861	ENSPCOG00000023898	RPL13A	99	64.141	Propithecus_coquereli
ENSCING00000014892	-	95	64.286	ENSPVAG00000010958	RPL13A	97	64.286	Pteropus_vampyrus
ENSCING00000014892	-	99	65.025	ENSPNYG00000019779	rpl13a	99	65.025	Pundamilia_nyererei
ENSCING00000014892	-	99	60.976	ENSPNAG00000026887	rpl13a	100	60.976	Pygocentrus_nattereri
ENSCING00000014892	-	98	63.366	ENSRNOG00000062298	Rpl13a	99	63.366	Rattus_norvegicus
ENSCING00000014892	-	90	67.742	ENSRBIG00000044737	RPL13A	92	67.742	Rhinopithecus_bieti
ENSCING00000014892	-	96	59.898	ENSRROG00000036041	-	97	59.898	Rhinopithecus_roxellana
ENSCING00000014892	-	64	69.173	ENSRROG00000028369	-	89	55.056	Rhinopithecus_roxellana
ENSCING00000014892	-	96	64.467	ENSRROG00000042976	-	97	64.467	Rhinopithecus_roxellana
ENSCING00000014892	-	95	58.462	YNL069C	RPL16B	97	58.462	Saccharomyces_cerevisiae
ENSCING00000014892	-	95	57.949	YIL133C	RPL16A	97	57.949	Saccharomyces_cerevisiae
ENSCING00000014892	-	96	52.804	ENSSBOG00000024635	-	97	52.804	Saimiri_boliviensis_boliviensis
ENSCING00000014892	-	96	64.467	ENSSBOG00000028481	RPL13A	98	64.286	Saimiri_boliviensis_boliviensis
ENSCING00000014892	-	99	66.010	ENSSFOG00015001972	rpl13a	99	66.010	Scleropages_formosus
ENSCING00000014892	-	99	64.532	ENSSDUG00000017181	rpl13a	99	64.532	Seriola_dumerili
ENSCING00000014892	-	99	64.532	ENSSLDG00000002561	rpl13a	99	64.532	Seriola_lalandi_dorsalis
ENSCING00000014892	-	82	58.333	ENSSLDG00000007920	-	95	56.684	Seriola_lalandi_dorsalis
ENSCING00000014892	-	98	63.861	ENSSSCG00000034448	-	99	63.861	Sus_scrofa
ENSCING00000014892	-	78	59.639	ENSSSCG00000031204	-	83	65.714	Sus_scrofa
ENSCING00000014892	-	99	63.547	ENSTRUG00000023611	rpl13a	99	63.547	Takifugu_rubripes
ENSCING00000014892	-	98	63.366	ENSTTRG00000005485	RPL13A	99	63.366	Tursiops_truncatus
ENSCING00000014892	-	98	63.861	ENSUAMG00000008438	RPL13A	99	63.861	Ursus_americanus
ENSCING00000014892	-	98	63.861	ENSUMAG00000002385	RPL13A	99	63.861	Ursus_maritimus
ENSCING00000014892	-	95	62.051	ENSVPAG00000006564	RPL13A	98	62.051	Vicugna_pacos
ENSCING00000014892	-	98	63.861	ENSVVUG00000022597	RPL13A	99	63.861	Vulpes_vulpes
ENSCING00000014892	-	98	62.439	ENSXETG00000014144	rpl13a	89	62.439	Xenopus_tropicalis
ENSCING00000014892	-	99	64.039	ENSXCOG00000004826	rpl13a	99	64.039	Xiphophorus_couchianus
ENSCING00000014892	-	99	64.039	ENSXMAG00000027604	rpl13a	99	64.039	Xiphophorus_maculatus