EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000014934 (Gene tree)
Gene ID: 100182394
Gene Symbol: -
Alias: -
Full Name: exosome complex component RRP4
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2101 bases
Position: chrHT000023.1:42758-44858
Accession: 100182394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000026787	ECR1_N	PF14382.6	8.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000027033	-	1329	XM_002126343	ENSCINP00000026787	302 (aa)	XP_002126379	F6Y6W3

Gene Model

Click here to download ENSCING00000014934's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000014934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000014934	-	94	61.672	ENSG00000130713	EXOSC2	99	59.174	Homo_sapiens
ENSCING00000014934	-	86	64.368	ENSAPOG00000008861	exosc2	93	64.368	Acanthochromis_polyacanthus
ENSCING00000014934	-	94	61.324	ENSAMEG00000016239	EXOSC2	96	61.324	Ailuropoda_melanoleuca
ENSCING00000014934	-	94	63.158	ENSACIG00000019054	exosc2	96	63.158	Amphilophus_citrinellus
ENSCING00000014934	-	93	63.028	ENSAOCG00000008577	exosc2	95	63.028	Amphiprion_ocellaris
ENSCING00000014934	-	93	63.028	ENSAOCG00000004983	exosc2	95	63.028	Amphiprion_ocellaris
ENSCING00000014934	-	93	63.028	ENSAPEG00000014088	exosc2	95	63.028	Amphiprion_percula
ENSCING00000014934	-	94	63.158	ENSATEG00000018680	exosc2	96	63.158	Anabas_testudineus
ENSCING00000014934	-	88	66.165	ENSAPLG00000012516	EXOSC2	90	66.165	Anas_platyrhynchos
ENSCING00000014934	-	94	63.028	ENSACAG00000002706	EXOSC2	95	63.028	Anolis_carolinensis
ENSCING00000014934	-	94	63.860	ENSACLG00000013613	exosc2	96	63.860	Astatotilapia_calliptera
ENSCING00000014934	-	94	62.284	ENSAMXG00000042605	exosc2	96	62.284	Astyanax_mexicanus
ENSCING00000014934	-	94	61.324	ENSBTAG00000048071	EXOSC2	96	61.324	Bos_taurus
ENSCING00000014934	-	84	42.969	WBGene00022232	exos-2	83	42.578	Caenorhabditis_elegans
ENSCING00000014934	-	94	61.324	ENSCJAG00000020537	EXOSC2	96	61.324	Callithrix_jacchus
ENSCING00000014934	-	94	61.672	ENSCAFG00000019941	EXOSC2	96	61.672	Canis_familiaris
ENSCING00000014934	-	94	61.672	ENSCAFG00020024047	EXOSC2	96	61.672	Canis_lupus_dingo
ENSCING00000014934	-	94	60.976	ENSCHIG00000021398	EXOSC2	96	60.976	Capra_hircus
ENSCING00000014934	-	94	61.324	ENSTSYG00000001805	EXOSC2	96	61.324	Carlito_syrichta
ENSCING00000014934	-	94	59.375	ENSCPOG00000005902	EXOSC2	96	59.375	Cavia_porcellus
ENSCING00000014934	-	94	61.324	ENSCCAG00000019749	EXOSC2	96	61.324	Cebus_capucinus
ENSCING00000014934	-	94	61.324	ENSCATG00000025389	-	96	61.324	Cercocebus_atys
ENSCING00000014934	-	94	60.627	ENSCLAG00000006195	EXOSC2	96	60.627	Chinchilla_lanigera
ENSCING00000014934	-	94	61.324	ENSCSAG00000014760	EXOSC2	96	61.324	Chlorocebus_sabaeus
ENSCING00000014934	-	88	64.528	ENSCHOG00000000858	EXOSC2	89	64.528	Choloepus_hoffmanni
ENSCING00000014934	-	95	63.103	ENSCPBG00000022626	EXOSC2	97	63.103	Chrysemys_picta_bellii
ENSCING00000014934	-	91	78.182	ENSCSAVG00000003684	-	100	78.182	Ciona_savignyi
ENSCING00000014934	-	97	55.219	ENSCANG00000029298	-	99	55.219	Colobus_angolensis_palliatus
ENSCING00000014934	-	94	61.324	ENSCANG00000039828	-	96	61.324	Colobus_angolensis_palliatus
ENSCING00000014934	-	94	60.627	ENSCGRG00001013981	Exosc2	96	60.627	Cricetulus_griseus_chok1gshd
ENSCING00000014934	-	94	60.627	ENSCGRG00000017629	Exosc2	96	60.627	Cricetulus_griseus_crigri
ENSCING00000014934	-	94	63.251	ENSCSEG00000016539	exosc2	96	63.251	Cynoglossus_semilaevis
ENSCING00000014934	-	94	62.718	ENSCVAG00000022260	exosc2	96	62.718	Cyprinodon_variegatus
ENSCING00000014934	-	94	60.345	ENSDARG00000028688	exosc2	96	60.345	Danio_rerio
ENSCING00000014934	-	89	63.100	ENSDNOG00000025767	-	99	63.100	Dasypus_novemcinctus
ENSCING00000014934	-	94	61.324	ENSDORG00000009238	Exosc2	96	61.324	Dipodomys_ordii
ENSCING00000014934	-	89	58.519	FBgn0034879	Rrp4	90	59.779	Drosophila_melanogaster
ENSCING00000014934	-	88	52.075	ENSETEG00000016130	-	94	52.075	Echinops_telfairi
ENSCING00000014934	-	94	61.672	ENSEASG00005008475	EXOSC2	83	61.672	Equus_asinus_asinus
ENSCING00000014934	-	94	61.672	ENSECAG00000007897	EXOSC2	83	61.672	Equus_caballus
ENSCING00000014934	-	94	62.021	ENSELUG00000013641	exosc2	96	62.021	Esox_lucius
ENSCING00000014934	-	94	60.627	ENSFCAG00000025936	EXOSC2	96	60.627	Felis_catus
ENSCING00000014934	-	94	62.021	ENSFALG00000001446	EXOSC2	96	62.021	Ficedula_albicollis
ENSCING00000014934	-	94	60.627	ENSFDAG00000017196	EXOSC2	96	60.627	Fukomys_damarensis
ENSCING00000014934	-	94	62.021	ENSFHEG00000018571	exosc2	96	62.021	Fundulus_heteroclitus
ENSCING00000014934	-	94	61.324	ENSGMOG00000011785	exosc2	96	61.324	Gadus_morhua
ENSCING00000014934	-	95	61.379	ENSGALG00000040373	EXOSC2	97	61.379	Gallus_gallus
ENSCING00000014934	-	94	62.369	ENSGAFG00000010283	exosc2	96	62.369	Gambusia_affinis
ENSCING00000014934	-	87	65.152	ENSGACG00000016805	exosc2	85	73.793	Gasterosteus_aculeatus
ENSCING00000014934	-	86	64.231	ENSGAGG00000021026	EXOSC2	96	64.231	Gopherus_agassizii
ENSCING00000014934	-	94	61.324	ENSGGOG00000010578	EXOSC2	96	61.324	Gorilla_gorilla
ENSCING00000014934	-	94	63.860	ENSHBUG00000022437	exosc2	96	63.860	Haplochromis_burtoni
ENSCING00000014934	-	94	60.976	ENSHGLG00000012834	EXOSC2	96	60.976	Heterocephalus_glaber_female
ENSCING00000014934	-	94	60.976	ENSHGLG00100007092	EXOSC2	96	60.976	Heterocephalus_glaber_male
ENSCING00000014934	-	94	61.754	ENSHCOG00000019130	exosc2	96	61.754	Hippocampus_comes
ENSCING00000014934	-	94	63.889	ENSIPUG00000015397	exosc2	96	63.889	Ictalurus_punctatus
ENSCING00000014934	-	94	61.324	ENSSTOG00000005999	EXOSC2	96	61.324	Ictidomys_tridecemlineatus
ENSCING00000014934	-	94	61.324	ENSJJAG00000003188	Exosc2	96	61.324	Jaculus_jaculus
ENSCING00000014934	-	87	66.288	ENSKMAG00000017397	exosc2	89	66.288	Kryptolebias_marmoratus
ENSCING00000014934	-	94	62.105	ENSLBEG00000019269	exosc2	96	62.105	Labrus_bergylta
ENSCING00000014934	-	94	64.583	ENSLACG00000015530	EXOSC2	96	64.583	Latimeria_chalumnae
ENSCING00000014934	-	94	61.938	ENSLAFG00000006984	EXOSC2	96	61.938	Loxodonta_africana
ENSCING00000014934	-	92	53.597	ENSMFAG00000034160	-	78	53.597	Macaca_fascicularis
ENSCING00000014934	-	94	61.324	ENSMFAG00000000597	-	96	61.324	Macaca_fascicularis
ENSCING00000014934	-	94	59.233	ENSMMUG00000012498	EXOSC2	96	59.233	Macaca_mulatta
ENSCING00000014934	-	92	54.317	ENSMNEG00000028704	-	85	54.317	Macaca_nemestrina
ENSCING00000014934	-	99	58.472	ENSMNEG00000031861	-	96	61.324	Macaca_nemestrina
ENSCING00000014934	-	94	61.324	ENSMLEG00000042587	-	96	61.324	Mandrillus_leucophaeus
ENSCING00000014934	-	92	53.597	ENSMLEG00000029891	-	85	53.597	Mandrillus_leucophaeus
ENSCING00000014934	-	87	66.667	ENSMAMG00000012466	exosc2	90	66.265	Mastacembelus_armatus
ENSCING00000014934	-	94	63.860	ENSMZEG00005018737	exosc2	96	63.860	Maylandia_zebra
ENSCING00000014934	-	95	62.069	ENSMGAG00000005450	EXOSC2	97	62.069	Meleagris_gallopavo
ENSCING00000014934	-	94	60.279	ENSMAUG00000008299	Exosc2	96	60.279	Mesocricetus_auratus
ENSCING00000014934	-	94	61.324	ENSMICG00000015495	EXOSC2	96	61.324	Microcebus_murinus
ENSCING00000014934	-	94	60.976	ENSMOCG00000008262	Exosc2	96	60.976	Microtus_ochrogaster
ENSCING00000014934	-	94	63.287	ENSMMOG00000009616	exosc2	96	63.287	Mola_mola
ENSCING00000014934	-	94	63.415	ENSMODG00000012114	EXOSC2	96	63.415	Monodelphis_domestica
ENSCING00000014934	-	93	63.830	ENSMALG00000022132	exosc2	95	63.830	Monopterus_albus
ENSCING00000014934	-	94	60.627	MGP_CAROLIEiJ_G0023415	Exosc2	96	60.627	Mus_caroli
ENSCING00000014934	-	94	60.627	ENSMUSG00000039356	Exosc2	96	60.627	Mus_musculus
ENSCING00000014934	-	94	60.279	MGP_PahariEiJ_G0024872	Exosc2	96	60.279	Mus_pahari
ENSCING00000014934	-	94	60.627	MGP_SPRETEiJ_G0024332	Exosc2	96	60.627	Mus_spretus
ENSCING00000014934	-	94	62.021	ENSMPUG00000012686	EXOSC2	96	62.021	Mustela_putorius_furo
ENSCING00000014934	-	94	61.379	ENSMLUG00000008776	EXOSC2	96	61.379	Myotis_lucifugus
ENSCING00000014934	-	94	60.627	ENSNGAG00000019383	Exosc2	96	60.627	Nannospalax_galili
ENSCING00000014934	-	94	63.509	ENSNBRG00000005453	exosc2	96	63.509	Neolamprologus_brichardi
ENSCING00000014934	-	94	61.672	ENSNLEG00000012533	EXOSC2	96	61.672	Nomascus_leucogenys
ENSCING00000014934	-	75	59.031	ENSMEUG00000000795	EXOSC2	76	59.031	Notamacropus_eugenii
ENSCING00000014934	-	54	66.265	ENSOPRG00000008688	EXOSC2	56	66.265	Ochotona_princeps
ENSCING00000014934	-	83	63.200	ENSODEG00000019513	-	96	63.200	Octodon_degus
ENSCING00000014934	-	94	59.233	ENSODEG00000016880	-	96	59.233	Octodon_degus
ENSCING00000014934	-	94	63.860	ENSONIG00000014086	exosc2	96	63.860	Oreochromis_niloticus
ENSCING00000014934	-	94	63.763	ENSOANG00000001044	EXOSC2	96	63.763	Ornithorhynchus_anatinus
ENSCING00000014934	-	94	61.672	ENSOCUG00000007138	EXOSC2	96	61.672	Oryctolagus_cuniculus
ENSCING00000014934	-	94	62.021	ENSORLG00000007443	exosc2	96	62.021	Oryzias_latipes
ENSCING00000014934	-	94	62.021	ENSORLG00020018902	exosc2	96	62.021	Oryzias_latipes_hni
ENSCING00000014934	-	94	62.369	ENSORLG00015006767	exosc2	96	63.100	Oryzias_latipes_hsok
ENSCING00000014934	-	94	62.069	ENSOMEG00000003533	exosc2	96	62.069	Oryzias_melastigma
ENSCING00000014934	-	94	61.672	ENSOGAG00000007558	EXOSC2	96	61.672	Otolemur_garnettii
ENSCING00000014934	-	94	60.900	ENSOARG00000007438	EXOSC2	96	60.900	Ovis_aries
ENSCING00000014934	-	94	61.672	ENSPPAG00000034796	EXOSC2	96	61.672	Pan_paniscus
ENSCING00000014934	-	94	60.976	ENSPPRG00000001089	EXOSC2	96	60.976	Panthera_pardus
ENSCING00000014934	-	94	60.976	ENSPTIG00000021163	EXOSC2	96	60.976	Panthera_tigris_altaica
ENSCING00000014934	-	94	61.672	ENSPTRG00000021476	EXOSC2	96	61.672	Pan_troglodytes
ENSCING00000014934	-	94	61.672	ENSPTRG00000045766	-	96	61.672	Pan_troglodytes
ENSCING00000014934	-	94	61.324	ENSPANG00000025966	EXOSC2	96	61.324	Papio_anubis
ENSCING00000014934	-	94	63.509	ENSPKIG00000004271	exosc2	96	63.509	Paramormyrops_kingsleyae
ENSCING00000014934	-	95	63.103	ENSPSIG00000006743	EXOSC2	97	63.103	Pelodiscus_sinensis
ENSCING00000014934	-	82	65.182	ENSPMGG00000010980	exosc2	95	65.182	Periophthalmus_magnuspinnatus
ENSCING00000014934	-	94	60.976	ENSPEMG00000006345	Exosc2	96	60.976	Peromyscus_maniculatus_bairdii
ENSCING00000014934	-	87	64.773	ENSPMAG00000001280	exosc2	92	63.768	Petromyzon_marinus
ENSCING00000014934	-	94	62.369	ENSPCIG00000024122	EXOSC2	94	62.369	Phascolarctos_cinereus
ENSCING00000014934	-	94	62.500	ENSPFOG00000019819	exosc2	96	62.500	Poecilia_formosa
ENSCING00000014934	-	94	62.369	ENSPLAG00000004605	exosc2	96	62.369	Poecilia_latipinna
ENSCING00000014934	-	94	62.369	ENSPMEG00000010976	exosc2	96	62.369	Poecilia_mexicana
ENSCING00000014934	-	94	62.369	ENSPREG00000014306	exosc2	96	62.369	Poecilia_reticulata
ENSCING00000014934	-	94	61.672	ENSPPYG00000019695	EXOSC2	96	61.672	Pongo_abelii
ENSCING00000014934	-	94	61.324	ENSPCAG00000013400	EXOSC2	96	61.324	Procavia_capensis
ENSCING00000014934	-	94	61.672	ENSPCOG00000017639	EXOSC2	96	61.672	Propithecus_coquereli
ENSCING00000014934	-	94	60.279	ENSPVAG00000001513	EXOSC2	96	60.279	Pteropus_vampyrus
ENSCING00000014934	-	94	63.860	ENSPNYG00000007383	exosc2	96	63.860	Pundamilia_nyererei
ENSCING00000014934	-	94	63.889	ENSPNAG00000014281	exosc2	96	63.889	Pygocentrus_nattereri
ENSCING00000014934	-	94	60.976	ENSRNOG00000009245	Exosc2	96	60.976	Rattus_norvegicus
ENSCING00000014934	-	97	55.219	ENSRBIG00000029791	-	99	55.219	Rhinopithecus_bieti
ENSCING00000014934	-	94	60.976	ENSRBIG00000031203	-	96	60.976	Rhinopithecus_bieti
ENSCING00000014934	-	94	60.976	ENSRROG00000010827	-	96	60.976	Rhinopithecus_roxellana
ENSCING00000014934	-	97	54.545	ENSRROG00000043609	-	99	54.545	Rhinopithecus_roxellana
ENSCING00000014934	-	87	44.257	YHR069C	-	82	44.257	Saccharomyces_cerevisiae
ENSCING00000014934	-	94	61.324	ENSSBOG00000022712	EXOSC2	96	61.324	Saimiri_boliviensis_boliviensis
ENSCING00000014934	-	94	63.415	ENSSHAG00000016050	EXOSC2	96	63.415	Sarcophilus_harrisii
ENSCING00000014934	-	94	62.937	ENSSFOG00015011245	exosc2	96	62.937	Scleropages_formosus
ENSCING00000014934	-	94	62.898	ENSSMAG00000003112	exosc2	96	62.898	Scophthalmus_maximus
ENSCING00000014934	-	94	62.937	ENSSDUG00000004634	exosc2	96	62.937	Seriola_dumerili
ENSCING00000014934	-	94	63.604	ENSSLDG00000010616	exosc2	96	63.604	Seriola_lalandi_dorsalis
ENSCING00000014934	-	95	63.481	ENSSPUG00000013391	EXOSC2	97	63.481	Sphenodon_punctatus
ENSCING00000014934	-	94	62.369	ENSSPAG00000022947	exosc2	96	62.369	Stegastes_partitus
ENSCING00000014934	-	94	62.847	ENSSSCG00000005704	EXOSC2	96	62.847	Sus_scrofa
ENSCING00000014934	-	94	62.021	ENSTGUG00000004697	EXOSC2	96	62.021	Taeniopygia_guttata
ENSCING00000014934	-	94	60.351	ENSTRUG00000022436	exosc2	95	60.351	Takifugu_rubripes
ENSCING00000014934	-	94	57.986	ENSTTRG00000015159	EXOSC2	96	57.986	Tursiops_truncatus
ENSCING00000014934	-	89	62.731	ENSUAMG00000009651	EXOSC2	95	62.731	Ursus_americanus
ENSCING00000014934	-	94	61.324	ENSUMAG00000018726	EXOSC2	96	61.324	Ursus_maritimus
ENSCING00000014934	-	94	61.672	ENSVVUG00000027665	EXOSC2	96	61.672	Vulpes_vulpes
ENSCING00000014934	-	94	65.854	ENSXETG00000001340	exosc2	96	65.854	Xenopus_tropicalis
ENSCING00000014934	-	94	62.021	ENSXMAG00000005265	exosc2	96	62.021	Xiphophorus_maculatus