EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000015312 (Gene tree)
Gene ID: 100181580
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2521 bases
Position: chrHT000122.1:264064-266584
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000027224	THOC7	PF05615.13	4.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000027470	-	726	-	ENSCINP00000027224	210 (aa)	-	F7B819

Gene Model

Click here to download ENSCING00000015312's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000015312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000015312	-	96	45.588	ENSG00000163634	THOC7	97	75.862	Homo_sapiens
ENSCING00000015312	-	88	47.872	ENSAPOG00000009523	thoc7	89	49.162	Acanthochromis_polyacanthus
ENSCING00000015312	-	95	45.274	ENSAMEG00000015287	THOC7	86	48.571	Ailuropoda_melanoleuca
ENSCING00000015312	-	84	50.279	ENSACIG00000008742	thoc7	87	50.279	Amphilophus_citrinellus
ENSCING00000015312	-	88	47.872	ENSAOCG00000006925	thoc7	89	49.162	Amphiprion_ocellaris
ENSCING00000015312	-	87	48.108	ENSAPEG00000001653	thoc7	89	49.432	Amphiprion_percula
ENSCING00000015312	-	88	48.404	ENSATEG00000018422	thoc7	88	49.721	Anabas_testudineus
ENSCING00000015312	-	91	45.641	ENSAPLG00000003317	THOC7	87	48.023	Anas_platyrhynchos
ENSCING00000015312	-	94	45.771	ENSACAG00000001152	THOC7	87	48.315	Anolis_carolinensis
ENSCING00000015312	-	96	46.078	ENSANAG00000030433	THOC7	98	45.771	Aotus_nancymaae
ENSCING00000015312	-	90	48.168	ENSACLG00000015413	thoc7	88	49.721	Astatotilapia_calliptera
ENSCING00000015312	-	89	48.421	ENSAMXG00000014367	thoc7	94	48.421	Astyanax_mexicanus
ENSCING00000015312	-	96	45.588	ENSBTAG00000032872	THOC7	98	45.098	Bos_taurus
ENSCING00000015312	-	96	44.118	ENSCJAG00000022907	-	98	43.627	Callithrix_jacchus
ENSCING00000015312	-	96	46.078	ENSCJAG00000034899	-	98	45.588	Callithrix_jacchus
ENSCING00000015312	-	94	45.000	ENSCAFG00000006867	THOC7	88	48.276	Canis_familiaris
ENSCING00000015312	-	96	45.098	ENSCAFG00020010785	THOC7	87	48.315	Canis_lupus_dingo
ENSCING00000015312	-	95	45.771	ENSCHIG00000018603	THOC7	97	45.274	Capra_hircus
ENSCING00000015312	-	96	45.098	ENSTSYG00000013055	THOC7	98	44.608	Carlito_syrichta
ENSCING00000015312	-	90	40.000	ENSCAPG00000009089	THOC7	85	41.714	Cavia_aperea
ENSCING00000015312	-	91	45.960	ENSCPOG00000007930	THOC7	87	48.315	Cavia_porcellus
ENSCING00000015312	-	96	45.588	ENSCCAG00000001638	THOC7	98	45.274	Cebus_capucinus
ENSCING00000015312	-	96	46.078	ENSCATG00000038732	THOC7	98	45.771	Cercocebus_atys
ENSCING00000015312	-	90	45.876	ENSCLAG00000000664	THOC7	88	48.276	Chinchilla_lanigera
ENSCING00000015312	-	96	46.078	ENSCSAG00000011986	THOC7	98	45.588	Chlorocebus_sabaeus
ENSCING00000015312	-	76	32.500	ENSCHOG00000012170	THOC7	98	31.875	Choloepus_hoffmanni
ENSCING00000015312	-	70	40.136	ENSCPBG00000026834	THOC7	85	42.636	Chrysemys_picta_bellii
ENSCING00000015312	-	100	80.095	ENSCSAVG00000010669	-	100	80.392	Ciona_savignyi
ENSCING00000015312	-	95	45.771	ENSCANG00000028301	THOC7	99	45.000	Colobus_angolensis_palliatus
ENSCING00000015312	-	96	45.098	ENSCGRG00001014815	Thoc7	87	48.315	Cricetulus_griseus_chok1gshd
ENSCING00000015312	-	95	45.274	ENSCGRG00000014860	Thoc7	88	48.571	Cricetulus_griseus_crigri
ENSCING00000015312	-	88	48.387	ENSCSEG00000005643	thoc7	89	49.438	Cynoglossus_semilaevis
ENSCING00000015312	-	88	47.340	ENSCVAG00000008059	thoc7	88	48.603	Cyprinodon_variegatus
ENSCING00000015312	-	88	50.267	ENSDARG00000015394	thoc7	88	51.124	Danio_rerio
ENSCING00000015312	-	80	30.588	ENSDNOG00000047257	-	80	30.636	Dasypus_novemcinctus
ENSCING00000015312	-	96	45.098	ENSDNOG00000005917	-	98	44.608	Dasypus_novemcinctus
ENSCING00000015312	-	87	47.027	ENSDORG00000028787	-	90	48.276	Dipodomys_ordii
ENSCING00000015312	-	80	49.123	ENSDORG00000009225	-	91	48.851	Dipodomys_ordii
ENSCING00000015312	-	84	34.463	FBgn0035110	thoc7	67	33.508	Drosophila_melanogaster
ENSCING00000015312	-	94	39.000	ENSETEG00000015076	THOC7	100	39.000	Echinops_telfairi
ENSCING00000015312	-	87	45.405	ENSEBUG00000006746	thoc7	85	46.067	Eptatretus_burgeri
ENSCING00000015312	-	90	45.876	ENSEASG00005001507	THOC7	87	48.276	Equus_asinus_asinus
ENSCING00000015312	-	91	45.960	ENSECAG00000000497	THOC7	87	48.315	Equus_caballus
ENSCING00000015312	-	82	48.276	ENSEEUG00000015161	THOC7	92	48.276	Erinaceus_europaeus
ENSCING00000015312	-	88	49.468	ENSELUG00000007905	thoc7	89	50.279	Esox_lucius
ENSCING00000015312	-	91	45.960	ENSFCAG00000023008	THOC7	87	48.315	Felis_catus
ENSCING00000015312	-	92	46.154	ENSFALG00000013245	THOC7	88	48.588	Ficedula_albicollis
ENSCING00000015312	-	90	46.392	ENSFDAG00000016387	THOC7	88	48.851	Fukomys_damarensis
ENSCING00000015312	-	90	47.644	ENSFHEG00000004406	thoc7	88	49.162	Fundulus_heteroclitus
ENSCING00000015312	-	91	46.392	ENSGMOG00000009111	thoc7	91	49.432	Gadus_morhua
ENSCING00000015312	-	92	46.154	ENSGALG00000007299	THOC7	87	48.315	Gallus_gallus
ENSCING00000015312	-	88	47.368	ENSGACG00000009218	thoc7	87	48.619	Gasterosteus_aculeatus
ENSCING00000015312	-	92	45.918	ENSGAGG00000008038	THOC7	87	48.315	Gopherus_agassizii
ENSCING00000015312	-	95	45.771	ENSGGOG00000024282	THOC7	99	45.000	Gorilla_gorilla
ENSCING00000015312	-	90	48.168	ENSHBUG00000004070	thoc7	88	49.721	Haplochromis_burtoni
ENSCING00000015312	-	91	46.465	ENSHGLG00000002165	THOC7	87	48.876	Heterocephalus_glaber_female
ENSCING00000015312	-	91	36.041	ENSHGLG00000003232	-	87	37.079	Heterocephalus_glaber_female
ENSCING00000015312	-	90	38.462	ENSHGLG00000015921	-	83	39.429	Heterocephalus_glaber_female
ENSCING00000015312	-	90	38.462	ENSHGLG00100017070	-	83	39.429	Heterocephalus_glaber_male
ENSCING00000015312	-	91	36.041	ENSHGLG00100018265	-	87	37.079	Heterocephalus_glaber_male
ENSCING00000015312	-	90	46.392	ENSHGLG00100007183	-	88	48.851	Heterocephalus_glaber_male
ENSCING00000015312	-	70	40.541	ENSHCOG00000014078	thoc7	86	43.411	Hippocampus_comes
ENSCING00000015312	-	88	46.809	ENSHCOG00000013910	thoc7	88	48.045	Hippocampus_comes
ENSCING00000015312	-	93	46.970	ENSIPUG00000023494	thoc7	98	46.970	Ictalurus_punctatus
ENSCING00000015312	-	90	46.154	ENSSTOG00000012552	THOC7	88	48.571	Ictidomys_tridecemlineatus
ENSCING00000015312	-	94	46.000	ENSJJAG00000016662	-	99	45.500	Jaculus_jaculus
ENSCING00000015312	-	89	40.415	ENSJJAG00000018503	-	84	40.556	Jaculus_jaculus
ENSCING00000015312	-	93	47.236	ENSKMAG00000009670	thoc7	99	47.000	Kryptolebias_marmoratus
ENSCING00000015312	-	88	47.340	ENSLBEG00000025612	thoc7	89	48.333	Labrus_bergylta
ENSCING00000015312	-	84	48.315	ENSLACG00000003527	THOC7	87	48.315	Latimeria_chalumnae
ENSCING00000015312	-	84	50.000	ENSLOCG00000010342	thoc7	86	50.000	Lepisosteus_oculatus
ENSCING00000015312	-	90	46.667	ENSLAFG00000001987	THOC7	86	48.571	Loxodonta_africana
ENSCING00000015312	-	96	46.078	ENSMFAG00000032653	THOC7	98	45.771	Macaca_fascicularis
ENSCING00000015312	-	95	46.269	ENSMMUG00000012783	THOC7	98	45.771	Macaca_mulatta
ENSCING00000015312	-	96	46.078	ENSMNEG00000035012	THOC7	98	45.771	Macaca_nemestrina
ENSCING00000015312	-	95	46.269	ENSMLEG00000041263	THOC7	99	45.500	Mandrillus_leucophaeus
ENSCING00000015312	-	84	49.721	ENSMAMG00000019803	thoc7	97	49.721	Mastacembelus_armatus
ENSCING00000015312	-	90	48.168	ENSMZEG00005011996	thoc7	88	49.721	Maylandia_zebra
ENSCING00000015312	-	72	40.260	ENSMGAG00000009059	THOC7	85	42.647	Meleagris_gallopavo
ENSCING00000015312	-	94	45.000	ENSMAUG00000002228	Thoc7	88	48.276	Mesocricetus_auratus
ENSCING00000015312	-	96	44.608	ENSMICG00000045229	THOC7	86	48.571	Microcebus_murinus
ENSCING00000015312	-	95	45.050	ENSMOCG00000019446	Thoc7	87	47.753	Microtus_ochrogaster
ENSCING00000015312	-	84	49.444	ENSMMOG00000000777	thoc7	97	49.444	Mola_mola
ENSCING00000015312	-	85	47.514	ENSMODG00000003009	THOC7	83	48.023	Monodelphis_domestica
ENSCING00000015312	-	96	45.098	MGP_CAROLIEiJ_G0018957	Thoc7	87	48.315	Mus_caroli
ENSCING00000015312	-	96	45.098	ENSMUSG00000053453	Thoc7	98	47.399	Mus_musculus
ENSCING00000015312	-	96	45.098	MGP_PahariEiJ_G0029971	Thoc7	87	48.315	Mus_pahari
ENSCING00000015312	-	96	45.098	MGP_SPRETEiJ_G0019833	Thoc7	87	48.315	Mus_spretus
ENSCING00000015312	-	95	39.109	ENSMPUG00000016928	THOC7	87	41.477	Mustela_putorius_furo
ENSCING00000015312	-	90	46.667	ENSMLUG00000012060	-	87	48.571	Myotis_lucifugus
ENSCING00000015312	-	91	43.590	ENSMLUG00000003510	-	87	45.143	Myotis_lucifugus
ENSCING00000015312	-	85	48.066	ENSNGAG00000022918	-	87	48.588	Nannospalax_galili
ENSCING00000015312	-	67	36.879	ENSNGAG00000001946	-	72	40.870	Nannospalax_galili
ENSCING00000015312	-	81	44.444	ENSNGAG00000010425	-	85	44.643	Nannospalax_galili
ENSCING00000015312	-	90	48.168	ENSNBRG00000020675	thoc7	88	49.721	Neolamprologus_brichardi
ENSCING00000015312	-	96	45.588	ENSNLEG00000011760	THOC7	98	45.098	Nomascus_leucogenys
ENSCING00000015312	-	57	38.333	ENSMEUG00000006342	THOC7	77	42.553	Notamacropus_eugenii
ENSCING00000015312	-	94	45.000	ENSOPRG00000016403	THOC7	88	48.276	Ochotona_princeps
ENSCING00000015312	-	90	46.667	ENSODEG00000000426	THOC7	88	48.571	Octodon_degus
ENSCING00000015312	-	90	48.168	ENSONIG00000020361	thoc7	88	49.721	Oreochromis_niloticus
ENSCING00000015312	-	60	42.188	ENSOANG00000015693	THOC7	85	41.985	Ornithorhynchus_anatinus
ENSCING00000015312	-	91	45.596	ENSOCUG00000021860	-	86	48.571	Oryctolagus_cuniculus
ENSCING00000015312	-	91	46.701	ENSOCUG00000009136	-	88	48.876	Oryctolagus_cuniculus
ENSCING00000015312	-	95	46.798	ENSORLG00000008192	thoc7	79	49.721	Oryzias_latipes
ENSCING00000015312	-	95	46.798	ENSORLG00020009776	thoc7	79	49.721	Oryzias_latipes_hni
ENSCING00000015312	-	95	46.798	ENSORLG00015005198	thoc7	88	49.721	Oryzias_latipes_hsok
ENSCING00000015312	-	86	49.180	ENSOMEG00000005739	thoc7	88	49.721	Oryzias_melastigma
ENSCING00000015312	-	91	46.465	ENSOGAG00000024865	THOC7	87	48.315	Otolemur_garnettii
ENSCING00000015312	-	95	45.771	ENSOARG00000011396	THOC7	99	45.274	Ovis_aries
ENSCING00000015312	-	96	45.588	ENSPPAG00000044086	THOC7	98	45.098	Pan_paniscus
ENSCING00000015312	-	90	45.876	ENSPPRG00000004022	THOC7	85	48.276	Panthera_pardus
ENSCING00000015312	-	90	46.154	ENSPTIG00000010860	THOC7	82	48.571	Panthera_tigris_altaica
ENSCING00000015312	-	96	45.588	ENSPTRG00000015076	THOC7	98	45.098	Pan_troglodytes
ENSCING00000015312	-	96	46.078	ENSPANG00000009531	THOC7	98	45.771	Papio_anubis
ENSCING00000015312	-	94	47.000	ENSPKIG00000023365	thoc7	99	47.000	Paramormyrops_kingsleyae
ENSCING00000015312	-	70	39.865	ENSPSIG00000002810	THOC7	97	39.865	Pelodiscus_sinensis
ENSCING00000015312	-	84	49.721	ENSPMGG00000001140	thoc7	88	49.721	Periophthalmus_magnuspinnatus
ENSCING00000015312	-	94	45.000	ENSPEMG00000000620	Thoc7	88	48.276	Peromyscus_maniculatus_bairdii
ENSCING00000015312	-	91	47.000	ENSPMAG00000001319	thoc7	88	48.901	Petromyzon_marinus
ENSCING00000015312	-	96	44.118	ENSPCIG00000012736	THOC7	87	47.753	Phascolarctos_cinereus
ENSCING00000015312	-	90	48.691	ENSPFOG00000010233	thoc7	94	48.168	Poecilia_formosa
ENSCING00000015312	-	90	48.691	ENSPLAG00000002693	thoc7	94	48.168	Poecilia_latipinna
ENSCING00000015312	-	90	48.168	ENSPMEG00000023493	thoc7	94	47.644	Poecilia_mexicana
ENSCING00000015312	-	90	48.168	ENSPREG00000018772	thoc7	94	47.644	Poecilia_reticulata
ENSCING00000015312	-	95	45.771	ENSPPYG00000013746	THOC7	89	45.274	Pongo_abelii
ENSCING00000015312	-	60	49.612	ENSPCAG00000006143	THOC7	99	49.612	Procavia_capensis
ENSCING00000015312	-	96	45.098	ENSPCOG00000022000	-	98	44.776	Propithecus_coquereli
ENSCING00000015312	-	96	45.588	ENSPCOG00000011923	-	98	45.098	Propithecus_coquereli
ENSCING00000015312	-	91	45.078	ENSPVAG00000012310	THOC7	87	48.000	Pteropus_vampyrus
ENSCING00000015312	-	90	48.168	ENSPNYG00000001260	thoc7	88	49.721	Pundamilia_nyererei
ENSCING00000015312	-	89	47.895	ENSPNAG00000003038	thoc7	94	47.895	Pygocentrus_nattereri
ENSCING00000015312	-	96	45.098	ENSRNOG00000007701	Thoc7	87	48.315	Rattus_norvegicus
ENSCING00000015312	-	96	40.686	ENSRBIG00000033497	THOC7	97	40.196	Rhinopithecus_bieti
ENSCING00000015312	-	96	45.588	ENSRROG00000008884	THOC7	98	45.274	Rhinopithecus_roxellana
ENSCING00000015312	-	96	45.098	ENSSBOG00000021884	THOC7	98	44.608	Saimiri_boliviensis_boliviensis
ENSCING00000015312	-	96	44.335	ENSSHAG00000011615	THOC7	87	47.458	Sarcophilus_harrisii
ENSCING00000015312	-	94	46.734	ENSSFOG00015018204	thoc7	89	48.876	Scleropages_formosus
ENSCING00000015312	-	93	46.701	ENSSMAG00000010488	thoc7	99	46.465	Scophthalmus_maximus
ENSCING00000015312	-	94	45.771	ENSSDUG00000022145	thoc7	86	49.721	Seriola_dumerili
ENSCING00000015312	-	88	48.404	ENSSLDG00000013770	thoc7	88	49.721	Seriola_lalandi_dorsalis
ENSCING00000015312	-	94	45.000	ENSSARG00000014279	-	88	48.276	Sorex_araneus
ENSCING00000015312	-	94	45.000	ENSSARG00000013894	-	88	48.276	Sorex_araneus
ENSCING00000015312	-	91	46.632	ENSSPUG00000011505	THOC7	88	49.143	Sphenodon_punctatus
ENSCING00000015312	-	90	47.644	ENSSPAG00000001047	thoc7	89	49.162	Stegastes_partitus
ENSCING00000015312	-	96	45.098	ENSSSCG00000011491	THOC7	87	48.315	Sus_scrofa
ENSCING00000015312	-	92	44.670	ENSTGUG00000009431	THOC7	87	46.927	Taeniopygia_guttata
ENSCING00000015312	-	88	50.532	ENSTRUG00000025690	thoc7	89	50.838	Takifugu_rubripes
ENSCING00000015312	-	88	49.468	ENSTNIG00000006681	thoc7	89	50.838	Tetraodon_nigroviridis
ENSCING00000015312	-	77	43.558	ENSTBEG00000003371	-	88	42.515	Tupaia_belangeri
ENSCING00000015312	-	60	52.344	ENSTBEG00000007069	-	65	52.344	Tupaia_belangeri
ENSCING00000015312	-	95	45.274	ENSTTRG00000013618	-	86	48.571	Tursiops_truncatus
ENSCING00000015312	-	75	38.365	ENSTTRG00000007980	-	85	41.667	Tursiops_truncatus
ENSCING00000015312	-	96	45.588	ENSUAMG00000002790	-	87	48.876	Ursus_americanus
ENSCING00000015312	-	74	39.355	ENSUMAG00000023513	-	99	38.710	Ursus_maritimus
ENSCING00000015312	-	91	37.629	ENSUMAG00000011864	-	96	38.071	Ursus_maritimus
ENSCING00000015312	-	95	45.274	ENSVPAG00000010083	THOC7	86	48.571	Vicugna_pacos
ENSCING00000015312	-	74	39.355	ENSVVUG00000014787	THOC7	85	42.636	Vulpes_vulpes
ENSCING00000015312	-	90	43.684	ENSXETG00000006539	thoc7	90	44.693	Xenopus_tropicalis
ENSCING00000015312	-	90	48.691	ENSXMAG00000002014	thoc7	94	48.168	Xiphophorus_maculatus