EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000015811 (Gene tree)
Gene ID: 100180701
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 642 bases
Position: chrHT000043.1:62259-62900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000027762	SAP	PF02037.27	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000028008	-	642	-	ENSCINP00000027762	214 (aa)	-	F6RW32

Gene Model

Click here to download ENSCING00000015811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000015811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000015811	-	99	38.596	ENSG00000205323	SARNP	87	52.083	Homo_sapiens
ENSCING00000015811	-	89	37.186	ENSAPOG00000005247	sarnp	74	35.468	Acanthochromis_polyacanthus
ENSCING00000015811	-	99	38.865	ENSAMEG00000011769	SARNP	99	34.934	Ailuropoda_melanoleuca
ENSCING00000015811	-	97	37.662	ENSAPEG00000016710	sarnp	99	36.207	Amphiprion_percula
ENSCING00000015811	-	96	37.333	ENSATEG00000024594	sarnp	99	35.242	Anabas_testudineus
ENSCING00000015811	-	100	38.428	ENSACAG00000015446	SARNP	100	36.245	Anolis_carolinensis
ENSCING00000015811	-	99	38.158	ENSANAG00000027405	-	99	34.649	Aotus_nancymaae
ENSCING00000015811	-	92	37.850	ENSANAG00000025021	-	99	33.191	Aotus_nancymaae
ENSCING00000015811	-	96	38.009	ENSACLG00000016479	sarnp	99	36.564	Astatotilapia_calliptera
ENSCING00000015811	-	97	38.053	ENSAMXG00000004834	sarnp	99	36.283	Astyanax_mexicanus
ENSCING00000015811	-	99	34.322	ENSBTAG00000020662	SARNP	99	35.088	Bos_taurus
ENSCING00000015811	-	80	36.158	ENSBTAG00000032446	-	79	32.768	Bos_taurus
ENSCING00000015811	-	99	37.719	ENSCJAG00000007853	-	99	34.211	Callithrix_jacchus
ENSCING00000015811	-	96	38.009	ENSCAFG00000023714	SARNP	98	33.937	Canis_familiaris
ENSCING00000015811	-	99	37.778	ENSCAFG00020026107	SARNP	96	34.545	Canis_lupus_dingo
ENSCING00000015811	-	99	34.434	ENSCHIG00000017443	-	99	33.641	Capra_hircus
ENSCING00000015811	-	85	34.000	ENSCHIG00000013335	-	94	32.057	Capra_hircus
ENSCING00000015811	-	99	38.596	ENSTSYG00000009225	SARNP	99	34.649	Carlito_syrichta
ENSCING00000015811	-	99	39.474	ENSCPOG00000011755	-	99	35.526	Cavia_porcellus
ENSCING00000015811	-	83	35.789	ENSCCAG00000004296	-	96	33.659	Cebus_capucinus
ENSCING00000015811	-	99	38.596	ENSCCAG00000019247	-	99	35.088	Cebus_capucinus
ENSCING00000015811	-	91	36.967	ENSCCAG00000030892	-	96	36.538	Cebus_capucinus
ENSCING00000015811	-	99	38.596	ENSCATG00000045088	SARNP	99	35.088	Cercocebus_atys
ENSCING00000015811	-	99	36.638	ENSCATG00000042076	-	97	33.761	Cercocebus_atys
ENSCING00000015811	-	99	39.474	ENSCLAG00000007774	-	99	35.088	Chinchilla_lanigera
ENSCING00000015811	-	99	38.596	ENSCSAG00000005303	SARNP	97	35.088	Chlorocebus_sabaeus
ENSCING00000015811	-	93	33.937	ENSCHOG00000005081	SARNP	99	33.333	Choloepus_hoffmanni
ENSCING00000015811	-	100	37.872	ENSCPBG00000012618	SARNP	100	35.808	Chrysemys_picta_bellii
ENSCING00000015811	-	99	35.931	ENSCANG00000027918	-	99	35.088	Colobus_angolensis_palliatus
ENSCING00000015811	-	99	39.035	ENSCGRG00001018129	-	99	35.088	Cricetulus_griseus_chok1gshd
ENSCING00000015811	-	99	39.035	ENSCGRG00000015182	-	99	35.088	Cricetulus_griseus_crigri
ENSCING00000015811	-	88	37.113	ENSCGRG00000000109	-	76	33.679	Cricetulus_griseus_crigri
ENSCING00000015811	-	96	35.426	ENSCVAG00000010924	sarnp	99	34.211	Cyprinodon_variegatus
ENSCING00000015811	-	97	35.747	ENSDARG00000059357	sarnp	99	32.579	Danio_rerio
ENSCING00000015811	-	99	38.596	ENSDNOG00000014518	SARNP	99	34.649	Dasypus_novemcinctus
ENSCING00000015811	-	99	39.035	ENSDORG00000001065	-	99	35.088	Dipodomys_ordii
ENSCING00000015811	-	100	36.910	ENSEBUG00000016080	sarnp	98	36.574	Eptatretus_burgeri
ENSCING00000015811	-	99	38.596	ENSECAG00000000708	SARNP	99	34.649	Equus_caballus
ENSCING00000015811	-	97	38.158	ENSELUG00000020983	sarnp	99	35.169	Esox_lucius
ENSCING00000015811	-	96	37.838	ENSELUG00000006786	HCC1	97	36.404	Esox_lucius
ENSCING00000015811	-	99	38.158	ENSFCAG00000037076	SARNP	99	34.211	Felis_catus
ENSCING00000015811	-	86	38.095	ENSFALG00000000679	SARNP	68	32.804	Ficedula_albicollis
ENSCING00000015811	-	99	38.596	ENSFDAG00000007766	SARNP	99	35.088	Fukomys_damarensis
ENSCING00000015811	-	96	36.771	ENSFHEG00000012192	sarnp	98	34.956	Fundulus_heteroclitus
ENSCING00000015811	-	96	35.047	ENSGMOG00000011467	sarnp	98	35.648	Gadus_morhua
ENSCING00000015811	-	100	38.865	ENSGALG00000030342	SARNP	100	35.808	Gallus_gallus
ENSCING00000015811	-	96	37.220	ENSGAFG00000019183	sarnp	98	34.956	Gambusia_affinis
ENSCING00000015811	-	97	36.771	ENSGACG00000011615	sarnp	99	34.649	Gasterosteus_aculeatus
ENSCING00000015811	-	99	38.596	ENSGGOG00000013217	SARNP	99	35.088	Gorilla_gorilla
ENSCING00000015811	-	87	32.000	ENSGGOG00000041309	-	99	33.480	Gorilla_gorilla
ENSCING00000015811	-	96	38.462	ENSHBUG00000008761	sarnp	99	37.004	Haplochromis_burtoni
ENSCING00000015811	-	99	38.596	ENSHGLG00000016869	SARNP	99	35.088	Heterocephalus_glaber_female
ENSCING00000015811	-	99	38.596	ENSHGLG00100014657	SARNP	99	35.088	Heterocephalus_glaber_male
ENSCING00000015811	-	97	34.821	ENSHCOG00000015510	sarnp	99	33.186	Hippocampus_comes
ENSCING00000015811	-	97	37.333	ENSIPUG00000012503	Sarnp	99	36.199	Ictalurus_punctatus
ENSCING00000015811	-	99	39.035	ENSSTOG00000000283	SARNP	99	35.088	Ictidomys_tridecemlineatus
ENSCING00000015811	-	99	38.596	ENSJJAG00000001070	-	99	35.088	Jaculus_jaculus
ENSCING00000015811	-	85	36.612	ENSJJAG00000011057	-	80	31.148	Jaculus_jaculus
ENSCING00000015811	-	96	37.500	ENSKMAG00000013400	sarnp	99	35.371	Kryptolebias_marmoratus
ENSCING00000015811	-	97	37.946	ENSLBEG00000025038	sarnp	99	36.283	Labrus_bergylta
ENSCING00000015811	-	94	39.252	ENSLACG00000018719	SARNP	89	36.697	Latimeria_chalumnae
ENSCING00000015811	-	92	34.483	ENSLACG00000014810	-	96	34.375	Latimeria_chalumnae
ENSCING00000015811	-	96	39.269	ENSLOCG00000003621	sarnp	98	37.838	Lepisosteus_oculatus
ENSCING00000015811	-	99	38.158	ENSLAFG00000015053	SARNP	99	34.211	Loxodonta_africana
ENSCING00000015811	-	99	38.596	ENSMFAG00000045270	SARNP	99	35.088	Macaca_fascicularis
ENSCING00000015811	-	99	34.632	ENSMFAG00000032419	-	97	33.054	Macaca_fascicularis
ENSCING00000015811	-	99	38.596	ENSMMUG00000006289	-	99	35.088	Macaca_mulatta
ENSCING00000015811	-	99	35.088	ENSMMUG00000037731	-	99	33.333	Macaca_mulatta
ENSCING00000015811	-	99	33.778	ENSMNEG00000041520	-	96	32.569	Macaca_nemestrina
ENSCING00000015811	-	96	32.127	ENSMNEG00000030688	-	95	31.222	Macaca_nemestrina
ENSCING00000015811	-	99	38.596	ENSMNEG00000044633	-	99	35.088	Macaca_nemestrina
ENSCING00000015811	-	99	36.638	ENSMLEG00000037790	-	98	32.895	Mandrillus_leucophaeus
ENSCING00000015811	-	96	37.557	ENSMAMG00000005942	sarnp	99	35.268	Mastacembelus_armatus
ENSCING00000015811	-	96	38.462	ENSMZEG00005023533	sarnp	99	37.004	Maylandia_zebra
ENSCING00000015811	-	100	38.865	ENSMGAG00000001807	SARNP	100	35.808	Meleagris_gallopavo
ENSCING00000015811	-	99	38.596	ENSMAUG00000005256	-	99	34.649	Mesocricetus_auratus
ENSCING00000015811	-	99	38.767	ENSMICG00000010902	-	99	34.802	Microcebus_murinus
ENSCING00000015811	-	99	38.596	ENSMOCG00000006502	-	99	34.649	Microtus_ochrogaster
ENSCING00000015811	-	97	35.648	ENSMMOG00000013258	sarnp	98	34.703	Mola_mola
ENSCING00000015811	-	89	37.056	ENSMALG00000009106	sarnp	79	35.821	Monopterus_albus
ENSCING00000015811	-	99	38.158	MGP_CAROLIEiJ_G0015958	-	99	34.211	Mus_caroli
ENSCING00000015811	-	99	38.158	ENSMUSG00000078427	Sarnp	99	34.211	Mus_musculus
ENSCING00000015811	-	92	38.614	MGP_PahariEiJ_G0031126	-	93	34.158	Mus_pahari
ENSCING00000015811	-	99	38.158	MGP_SPRETEiJ_G0016783	-	99	34.211	Mus_spretus
ENSCING00000015811	-	99	38.596	ENSMPUG00000000885	SARNP	99	34.649	Mustela_putorius_furo
ENSCING00000015811	-	79	36.000	ENSMLUG00000003565	SARNP	95	30.857	Myotis_lucifugus
ENSCING00000015811	-	99	38.596	ENSNGAG00000010245	-	99	34.649	Nannospalax_galili
ENSCING00000015811	-	92	38.614	ENSNLEG00000017599	-	99	34.653	Nomascus_leucogenys
ENSCING00000015811	-	99	33.772	ENSMEUG00000014879	SARNP	99	33.333	Notamacropus_eugenii
ENSCING00000015811	-	99	39.474	ENSODEG00000004608	-	99	35.088	Octodon_degus
ENSCING00000015811	-	87	33.505	ENSODEG00000012047	-	99	33.186	Octodon_degus
ENSCING00000015811	-	96	38.117	ENSONIG00000016523	sarnp	98	37.333	Oreochromis_niloticus
ENSCING00000015811	-	93	37.327	ENSOANG00000002882	SARNP	99	35.484	Ornithorhynchus_anatinus
ENSCING00000015811	-	96	37.557	ENSOCUG00000010117	SARNP	99	33.484	Oryctolagus_cuniculus
ENSCING00000015811	-	96	37.054	ENSORLG00000029565	sarnp	88	33.632	Oryzias_latipes
ENSCING00000015811	-	96	37.054	ENSORLG00015021649	sarnp	88	33.632	Oryzias_latipes_hsok
ENSCING00000015811	-	96	37.500	ENSOMEG00000014699	sarnp	99	34.335	Oryzias_melastigma
ENSCING00000015811	-	77	37.059	ENSOGAG00000001693	SARNP	92	31.765	Otolemur_garnettii
ENSCING00000015811	-	99	34.322	ENSOARG00000011218	SARNP	99	35.088	Ovis_aries
ENSCING00000015811	-	87	31.841	ENSPPAG00000042587	-	98	32.895	Pan_paniscus
ENSCING00000015811	-	99	38.596	ENSPPAG00000039513	SARNP	99	35.088	Pan_paniscus
ENSCING00000015811	-	99	38.158	ENSPPRG00000020704	SARNP	99	34.211	Panthera_pardus
ENSCING00000015811	-	87	31.841	ENSPTRG00000046696	-	98	32.895	Pan_troglodytes
ENSCING00000015811	-	99	38.596	ENSPTRG00000029747	SARNP	99	35.088	Pan_troglodytes
ENSCING00000015811	-	99	37.281	ENSPANG00000013149	-	99	35.526	Papio_anubis
ENSCING00000015811	-	99	36.207	ENSPANG00000006001	-	97	33.333	Papio_anubis
ENSCING00000015811	-	96	37.104	ENSPKIG00000002212	sarnp	98	34.513	Paramormyrops_kingsleyae
ENSCING00000015811	-	94	37.387	ENSPSIG00000002998	SARNP	100	32.735	Pelodiscus_sinensis
ENSCING00000015811	-	99	38.596	ENSPEMG00000000923	-	99	34.649	Peromyscus_maniculatus_bairdii
ENSCING00000015811	-	97	36.564	ENSPMAG00000009808	sarnp	95	35.652	Petromyzon_marinus
ENSCING00000015811	-	93	35.616	ENSPCIG00000024663	SARNP	98	34.579	Phascolarctos_cinereus
ENSCING00000015811	-	96	33.613	ENSPFOG00000013517	sarnp	98	34.361	Poecilia_formosa
ENSCING00000015811	-	96	34.034	ENSPLAG00000017096	sarnp	98	34.513	Poecilia_latipinna
ENSCING00000015811	-	96	34.454	ENSPMEG00000014306	sarnp	98	34.956	Poecilia_mexicana
ENSCING00000015811	-	99	38.596	ENSPPYG00000004630	SARNP	99	35.088	Pongo_abelii
ENSCING00000015811	-	97	40.179	ENSPNAG00000000975	sarnp	99	38.839	Pygocentrus_nattereri
ENSCING00000015811	-	99	39.035	ENSRNOG00000030520	Sarnp	99	35.088	Rattus_norvegicus
ENSCING00000015811	-	92	35.610	ENSRBIG00000019503	-	88	34.653	Rhinopithecus_bieti
ENSCING00000015811	-	99	35.931	ENSRBIG00000039295	-	99	35.088	Rhinopithecus_bieti
ENSCING00000015811	-	99	35.747	ENSRBIG00000026928	-	97	32.127	Rhinopithecus_bieti
ENSCING00000015811	-	99	35.931	ENSRROG00000035177	-	99	35.088	Rhinopithecus_roxellana
ENSCING00000015811	-	99	35.747	ENSRROG00000044575	-	97	32.127	Rhinopithecus_roxellana
ENSCING00000015811	-	92	33.333	ENSSBOG00000022787	-	96	33.333	Saimiri_boliviensis_boliviensis
ENSCING00000015811	-	99	37.719	ENSSBOG00000028635	-	98	34.211	Saimiri_boliviensis_boliviensis
ENSCING00000015811	-	99	38.596	ENSSBOG00000035337	-	99	35.088	Saimiri_boliviensis_boliviensis
ENSCING00000015811	-	99	36.052	ENSSHAG00000008865	SARNP	99	35.088	Sarcophilus_harrisii
ENSCING00000015811	-	96	36.364	ENSSFOG00015020709	sarnp	98	33.778	Scleropages_formosus
ENSCING00000015811	-	96	37.220	ENSSMAG00000018587	sarnp	98	36.726	Scophthalmus_maximus
ENSCING00000015811	-	97	38.326	ENSSDUG00000005484	sarnp	99	36.842	Seriola_dumerili
ENSCING00000015811	-	97	38.326	ENSSLDG00000003775	sarnp	99	36.842	Seriola_lalandi_dorsalis
ENSCING00000015811	-	99	39.474	ENSSSCG00000000364	SARNP	99	35.526	Sus_scrofa
ENSCING00000015811	-	92	34.434	ENSTGUG00000016126	SARNP	94	34.158	Taeniopygia_guttata
ENSCING00000015811	-	97	33.480	ENSTRUG00000009497	-	99	34.375	Takifugu_rubripes
ENSCING00000015811	-	97	33.772	ENSTNIG00000012432	sarnp	99	32.018	Tetraodon_nigroviridis
ENSCING00000015811	-	92	35.981	ENSTTRG00000009735	SARNP	99	35.319	Tursiops_truncatus
ENSCING00000015811	-	77	36.257	ENSUAMG00000015093	-	81	30.994	Ursus_americanus
ENSCING00000015811	-	92	38.614	ENSVPAG00000009515	SARNP	93	34.158	Vicugna_pacos
ENSCING00000015811	-	99	38.596	ENSVVUG00000022779	SARNP	99	34.649	Vulpes_vulpes
ENSCING00000015811	-	89	35.814	ENSXETG00000024657	sarnp	98	37.745	Xenopus_tropicalis
ENSCING00000015811	-	96	36.771	ENSXMAG00000009356	sarnp	98	34.513	Xiphophorus_maculatus