EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000016136 (Gene tree)
Gene ID: 100183846
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5338 bases
Position: chr1:336995-342332
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008241	MMR_HSR1	PF01926.23	9.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008241	-	1116	-	ENSCINP00000008241	210 (aa)	-	F6VY76

Gene Model

Click here to download ENSCING00000016136's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000016136	-	95	65.366	WBGene00004284	rab-35	97	65.366	Caenorhabditis_elegans
ENSCING00000016136	-	76	96.226	ENSCSAVG00000008995	-	100	96.226	Ciona_savignyi
ENSCING00000016136	-	97	67.464	FBgn0031090	Rab35	99	67.464	Drosophila_melanogaster
ENSCING00000016136	-	90	71.429	ENSSPUG00000010896	-	99	68.473	Sphenodon_punctatus
ENSCING00000016136	-	96	69.154	ENSXETG00000011370	rab35	99	69.154	Xenopus_tropicalis