EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000016317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 965 bases
Position: chrHT000088.1:1984-2948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000028346	RRM_1	PF00076.22	9.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000028592	-	690	-	ENSCINP00000028346	196 (aa)	-	F6W3V6

Gene Model

Click here to download ENSCING00000016317's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000016317	-	81	57.692	ENSAPOG00000017310	RNPS1	55	57.143	Acanthochromis_polyacanthus
ENSCING00000016317	-	82	56.731	ENSAOCG00000002404	RNPS1	56	56.122	Amphiprion_ocellaris
ENSCING00000016317	-	82	56.731	ENSAPEG00000006497	RNPS1	54	56.122	Amphiprion_percula
ENSCING00000016317	-	76	58.654	ENSATEG00000024267	RNPS1	56	58.163	Anabas_testudineus
ENSCING00000016317	-	100	82.412	ENSCSAVG00000001274	-	88	81.910	Ciona_savignyi
ENSCING00000016317	-	76	54.808	ENSELUG00000015003	RNPS1	62	53.061	Esox_lucius
ENSCING00000016317	-	81	57.692	ENSGACG00000011261	RNPS1	59	57.143	Gasterosteus_aculeatus
ENSCING00000016317	-	81	58.654	ENSMAMG00000021609	-	59	58.163	Mastacembelus_armatus
ENSCING00000016317	-	81	55.769	ENSSMAG00000016933	RNPS1	61	50.610	Scophthalmus_maximus
ENSCING00000016317	-	82	56.731	ENSSDUG00000011453	RNPS1	56	56.122	Seriola_dumerili
ENSCING00000016317	-	81	56.731	ENSSLDG00000021341	RNPS1	61	56.122	Seriola_lalandi_dorsalis
ENSCING00000016317	-	76	57.692	ENSSPAG00000009383	RNPS1	56	57.143	Stegastes_partitus