EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000016454 (Gene tree)
Gene ID: 100182593
Gene Symbol: -
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2101 bases
Position: chrHT000157.1:111292-113392
Accession: 100182593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005790	RNase_H2-Ydr279	PF09468.10	8.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005790	-	1181	XM_002129683	ENSCINP00000005790	283 (aa)	XP_002129719	F6WCS0

Gene Model

Click here to download ENSCING00000016454's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000016454	-	94	37.415	ENSG00000136104	RNASEH2B	99	36.949	Homo_sapiens
ENSCING00000016454	-	96	34.564	ENSAPOG00000010496	rnaseh2b	95	34.564	Acanthochromis_polyacanthus
ENSCING00000016454	-	90	37.413	ENSAMEG00000012040	RNASEH2B	92	37.413	Ailuropoda_melanoleuca
ENSCING00000016454	-	81	34.400	ENSACIG00000021991	rnaseh2b	94	32.338	Amphilophus_citrinellus
ENSCING00000016454	-	90	35.507	ENSAOCG00000013398	rnaseh2b	88	35.507	Amphiprion_ocellaris
ENSCING00000016454	-	90	35.507	ENSAPEG00000006033	rnaseh2b	88	35.507	Amphiprion_percula
ENSCING00000016454	-	90	36.823	ENSATEG00000008370	rnaseh2b	88	36.823	Anabas_testudineus
ENSCING00000016454	-	88	40.714	ENSAPLG00000008955	RNASEH2B	97	40.714	Anas_platyrhynchos
ENSCING00000016454	-	84	39.163	ENSACAG00000011679	RNASEH2B	86	39.163	Anolis_carolinensis
ENSCING00000016454	-	96	36.513	ENSANAG00000020662	RNASEH2B	94	36.513	Aotus_nancymaae
ENSCING00000016454	-	96	33.557	ENSACLG00000000467	rnaseh2b	95	33.557	Astatotilapia_calliptera
ENSCING00000016454	-	90	38.267	ENSAMXG00000014351	rnaseh2b	88	38.267	Astyanax_mexicanus
ENSCING00000016454	-	96	35.430	ENSBTAG00000020149	RNASEH2B	94	36.039	Bos_taurus
ENSCING00000016454	-	95	30.935	WBGene00009011	F21D5.6	87	30.935	Caenorhabditis_elegans
ENSCING00000016454	-	94	36.424	ENSCJAG00000008585	-	94	36.424	Callithrix_jacchus
ENSCING00000016454	-	73	31.579	ENSCJAG00000003822	-	79	31.579	Callithrix_jacchus
ENSCING00000016454	-	90	38.246	ENSCAFG00000004295	RNASEH2B	88	37.895	Canis_familiaris
ENSCING00000016454	-	96	37.377	ENSCAFG00020000250	RNASEH2B	95	37.705	Canis_lupus_dingo
ENSCING00000016454	-	96	34.899	ENSCHIG00000018220	RNASEH2B	94	35.855	Capra_hircus
ENSCING00000016454	-	77	36.929	ENSCHIG00000012982	-	83	36.929	Capra_hircus
ENSCING00000016454	-	94	33.784	ENSTSYG00000031177	-	94	33.673	Carlito_syrichta
ENSCING00000016454	-	90	38.246	ENSTSYG00000009176	-	88	38.246	Carlito_syrichta
ENSCING00000016454	-	90	33.684	ENSCAPG00000009978	RNASEH2B	91	34.965	Cavia_aperea
ENSCING00000016454	-	96	35.621	ENSCPOG00000032527	RNASEH2B	94	35.948	Cavia_porcellus
ENSCING00000016454	-	96	36.842	ENSCCAG00000026979	RNASEH2B	94	36.842	Cebus_capucinus
ENSCING00000016454	-	93	34.915	ENSCATG00000031336	RNASEH2B	79	34.915	Cercocebus_atys
ENSCING00000016454	-	90	36.749	ENSCLAG00000003517	RNASEH2B	74	37.102	Chinchilla_lanigera
ENSCING00000016454	-	93	34.333	ENSCSAG00000017701	RNASEH2B	87	34.333	Chlorocebus_sabaeus
ENSCING00000016454	-	75	40.397	ENSCHOG00000013688	RNASEH2B	94	33.667	Choloepus_hoffmanni
ENSCING00000016454	-	88	36.861	ENSCPBG00000008684	RNASEH2B	82	36.861	Chrysemys_picta_bellii
ENSCING00000016454	-	96	35.505	ENSCANG00000041511	-	94	35.505	Colobus_angolensis_palliatus
ENSCING00000016454	-	95	35.855	ENSCGRG00001000611	Rnaseh2b	94	36.842	Cricetulus_griseus_chok1gshd
ENSCING00000016454	-	95	35.855	ENSCGRG00000006077	Rnaseh2b	94	36.842	Cricetulus_griseus_crigri
ENSCING00000016454	-	94	36.177	ENSCSEG00000004910	rnaseh2b	93	36.177	Cynoglossus_semilaevis
ENSCING00000016454	-	97	34.000	ENSCVAG00000005212	rnaseh2b	95	34.000	Cyprinodon_variegatus
ENSCING00000016454	-	96	35.548	ENSDARG00000005128	rnaseh2b	94	35.548	Danio_rerio
ENSCING00000016454	-	82	35.521	ENSDNOG00000034290	-	80	35.907	Dasypus_novemcinctus
ENSCING00000016454	-	81	36.328	ENSDNOG00000049666	-	80	36.328	Dasypus_novemcinctus
ENSCING00000016454	-	96	36.842	ENSDORG00000010708	Rnaseh2b	94	37.171	Dipodomys_ordii
ENSCING00000016454	-	82	32.171	ENSEBUG00000005965	rnaseh2b	94	33.074	Eptatretus_burgeri
ENSCING00000016454	-	96	35.906	ENSEASG00005017323	RNASEH2B	94	37.333	Equus_asinus_asinus
ENSCING00000016454	-	96	35.570	ENSECAG00000014262	RNASEH2B	94	37.333	Equus_caballus
ENSCING00000016454	-	90	34.164	ENSELUG00000019560	rnaseh2b	87	34.164	Esox_lucius
ENSCING00000016454	-	93	34.021	ENSFCAG00000014257	RNASEH2B	88	34.680	Felis_catus
ENSCING00000016454	-	88	39.643	ENSFALG00000008435	RNASEH2B	90	39.643	Ficedula_albicollis
ENSCING00000016454	-	94	36.271	ENSFDAG00000009920	RNASEH2B	97	36.610	Fukomys_damarensis
ENSCING00000016454	-	89	35.636	ENSFHEG00000012160	rnaseh2b	87	35.636	Fundulus_heteroclitus
ENSCING00000016454	-	84	35.379	ENSGMOG00000016830	rnaseh2b	90	35.379	Gadus_morhua
ENSCING00000016454	-	88	38.790	ENSGALG00000017015	RNASEH2B	86	38.790	Gallus_gallus
ENSCING00000016454	-	89	33.455	ENSGAFG00000021222	rnaseh2b	87	33.455	Gambusia_affinis
ENSCING00000016454	-	96	32.237	ENSGACG00000002821	rnaseh2b	95	32.237	Gasterosteus_aculeatus
ENSCING00000016454	-	92	36.842	ENSGAGG00000014722	RNASEH2B	99	36.842	Gopherus_agassizii
ENSCING00000016454	-	96	36.893	ENSGGOG00000001044	RNASEH2B	94	36.893	Gorilla_gorilla
ENSCING00000016454	-	96	33.557	ENSHBUG00000006049	rnaseh2b	95	33.557	Haplochromis_burtoni
ENSCING00000016454	-	94	36.271	ENSHGLG00100015953	RNASEH2B	95	36.610	Heterocephalus_glaber_male
ENSCING00000016454	-	96	33.333	ENSHCOG00000003318	rnaseh2b	95	33.333	Hippocampus_comes
ENSCING00000016454	-	98	37.000	ENSIPUG00000023815	rnaseh2b	93	37.000	Ictalurus_punctatus
ENSCING00000016454	-	82	38.039	ENSSTOG00000015126	RNASEH2B	85	38.314	Ictidomys_tridecemlineatus
ENSCING00000016454	-	90	37.456	ENSJJAG00000013335	Rnaseh2b	91	37.456	Jaculus_jaculus
ENSCING00000016454	-	90	34.783	ENSKMAG00000002198	rnaseh2b	88	34.783	Kryptolebias_marmoratus
ENSCING00000016454	-	90	39.130	ENSLBEG00000019331	rnaseh2b	88	39.130	Labrus_bergylta
ENSCING00000016454	-	68	35.135	ENSLACG00000010782	RNASEH2B	90	36.481	Latimeria_chalumnae
ENSCING00000016454	-	89	36.620	ENSLOCG00000009296	rnaseh2b	87	36.620	Lepisosteus_oculatus
ENSCING00000016454	-	90	36.491	ENSLAFG00000030158	RNASEH2B	87	36.491	Loxodonta_africana
ENSCING00000016454	-	95	35.314	ENSMFAG00000038464	-	93	35.314	Macaca_fascicularis
ENSCING00000016454	-	95	34.722	ENSMMUG00000021746	RNASEH2B	92	34.722	Macaca_mulatta
ENSCING00000016454	-	95	35.314	ENSMNEG00000030580	RNASEH2B	93	35.314	Macaca_nemestrina
ENSCING00000016454	-	95	34.967	ENSMLEG00000043911	-	93	34.967	Mandrillus_leucophaeus
ENSCING00000016454	-	92	35.689	ENSMAMG00000017109	rnaseh2b	90	35.689	Mastacembelus_armatus
ENSCING00000016454	-	81	37.200	ENSMZEG00005021926	rnaseh2b	81	37.200	Maylandia_zebra
ENSCING00000016454	-	88	38.078	ENSMGAG00000015025	RNASEH2B	93	38.078	Meleagris_gallopavo
ENSCING00000016454	-	95	35.855	ENSMAUG00000016520	Rnaseh2b	94	36.842	Mesocricetus_auratus
ENSCING00000016454	-	95	36.513	ENSMICG00000000528	RNASEH2B	94	36.842	Microcebus_murinus
ENSCING00000016454	-	90	37.143	ENSMMOG00000019799	rnaseh2b	94	37.143	Mola_mola
ENSCING00000016454	-	95	38.562	ENSMODG00000010775	RNASEH2B	94	38.562	Monodelphis_domestica
ENSCING00000016454	-	90	35.192	ENSMALG00000004463	rnaseh2b	88	35.192	Monopterus_albus
ENSCING00000016454	-	76	36.885	MGP_CAROLIEiJ_G0019389	Rnaseh2b	86	38.057	Mus_caroli
ENSCING00000016454	-	95	36.393	ENSMUSG00000021932	Rnaseh2b	94	36.721	Mus_musculus
ENSCING00000016454	-	95	34.125	MGP_PahariEiJ_G0030407	-	95	34.226	Mus_pahari
ENSCING00000016454	-	66	33.971	ENSMPUG00000018010	RNASEH2B	83	33.971	Mustela_putorius_furo
ENSCING00000016454	-	96	37.124	ENSMLUG00000004065	-	94	37.705	Myotis_lucifugus
ENSCING00000016454	-	96	33.557	ENSNBRG00000003253	rnaseh2b	95	33.557	Neolamprologus_brichardi
ENSCING00000016454	-	96	37.097	ENSNLEG00000003804	RNASEH2B	94	37.097	Nomascus_leucogenys
ENSCING00000016454	-	90	38.112	ENSMEUG00000003665	RNASEH2B	94	38.112	Notamacropus_eugenii
ENSCING00000016454	-	96	36.789	ENSODEG00000006793	-	94	38.538	Octodon_degus
ENSCING00000016454	-	70	31.944	ENSODEG00000005412	-	88	34.597	Octodon_degus
ENSCING00000016454	-	96	32.550	ENSONIG00000006657	rnaseh2b	95	32.550	Oreochromis_niloticus
ENSCING00000016454	-	81	37.643	ENSOANG00000015537	RNASEH2B	86	37.643	Ornithorhynchus_anatinus
ENSCING00000016454	-	96	37.542	ENSOCUG00000008904	RNASEH2B	91	38.870	Oryctolagus_cuniculus
ENSCING00000016454	-	92	36.655	ENSORLG00000011850	rnaseh2b	90	36.655	Oryzias_latipes
ENSCING00000016454	-	92	37.011	ENSORLG00020012081	rnaseh2b	90	37.011	Oryzias_latipes_hni
ENSCING00000016454	-	92	36.655	ENSORLG00015015468	rnaseh2b	90	36.655	Oryzias_latipes_hsok
ENSCING00000016454	-	92	35.587	ENSOMEG00000012441	rnaseh2b	90	35.587	Oryzias_melastigma
ENSCING00000016454	-	96	36.039	ENSOGAG00000016486	RNASEH2B	98	36.364	Otolemur_garnettii
ENSCING00000016454	-	96	33.893	ENSOARG00000008701	RNASEH2B	98	34.868	Ovis_aries
ENSCING00000016454	-	93	37.288	ENSPPAG00000026374	RNASEH2B	92	37.288	Pan_paniscus
ENSCING00000016454	-	96	35.099	ENSPPRG00000012450	RNASEH2B	96	36.129	Panthera_pardus
ENSCING00000016454	-	90	35.816	ENSPTIG00000013918	RNASEH2B	98	36.458	Panthera_tigris_altaica
ENSCING00000016454	-	96	36.893	ENSPTRG00000005886	RNASEH2B	98	36.949	Pan_troglodytes
ENSCING00000016454	-	95	34.967	ENSPANG00000022424	-	93	34.967	Papio_anubis
ENSCING00000016454	-	92	33.099	ENSPKIG00000013386	rnaseh2b	89	33.099	Paramormyrops_kingsleyae
ENSCING00000016454	-	52	36.000	ENSPSIG00000002224	RNASEH2B	67	36.000	Pelodiscus_sinensis
ENSCING00000016454	-	65	37.619	ENSPMGG00000010299	rnaseh2b	98	37.619	Periophthalmus_magnuspinnatus
ENSCING00000016454	-	95	36.275	ENSPEMG00000019721	Rnaseh2b	94	37.171	Peromyscus_maniculatus_bairdii
ENSCING00000016454	-	83	35.271	ENSPCIG00000014535	-	84	35.271	Phascolarctos_cinereus
ENSCING00000016454	-	89	34.296	ENSPFOG00000016722	rnaseh2b	87	34.296	Poecilia_formosa
ENSCING00000016454	-	89	34.182	ENSPLAG00000011755	rnaseh2b	87	34.182	Poecilia_latipinna
ENSCING00000016454	-	89	34.182	ENSPMEG00000002721	rnaseh2b	87	34.182	Poecilia_mexicana
ENSCING00000016454	-	89	33.818	ENSPREG00000007737	rnaseh2b	87	33.818	Poecilia_reticulata
ENSCING00000016454	-	96	37.217	ENSPPYG00000005378	RNASEH2B	94	37.217	Pongo_abelii
ENSCING00000016454	-	95	36.721	ENSPCOG00000026623	RNASEH2B	94	37.049	Propithecus_coquereli
ENSCING00000016454	-	67	34.419	ENSPVAG00000000508	RNASEH2B	78	35.294	Pteropus_vampyrus
ENSCING00000016454	-	96	33.557	ENSPNYG00000013552	rnaseh2b	95	33.557	Pundamilia_nyererei
ENSCING00000016454	-	90	36.170	ENSPNAG00000024825	rnaseh2b	87	36.170	Pygocentrus_nattereri
ENSCING00000016454	-	95	37.829	ENSRNOG00000009192	Rnaseh2b	94	37.829	Rattus_norvegicus
ENSCING00000016454	-	80	37.500	ENSRBIG00000036017	-	78	37.500	Rhinopithecus_bieti
ENSCING00000016454	-	96	35.197	ENSRBIG00000028928	-	94	35.197	Rhinopithecus_bieti
ENSCING00000016454	-	96	35.197	ENSRROG00000018808	-	94	35.197	Rhinopithecus_roxellana
ENSCING00000016454	-	72	32.227	ENSRROG00000044915	-	71	34.759	Rhinopithecus_roxellana
ENSCING00000016454	-	95	36.304	ENSSBOG00000008081	RNASEH2B	96	37.676	Saimiri_boliviensis_boliviensis
ENSCING00000016454	-	95	38.284	ENSSHAG00000016190	RNASEH2B	94	38.284	Sarcophilus_harrisii
ENSCING00000016454	-	89	35.842	ENSSFOG00015010190	rnaseh2b	87	35.842	Scleropages_formosus
ENSCING00000016454	-	90	34.420	ENSSMAG00000001546	rnaseh2b	88	34.420	Scophthalmus_maximus
ENSCING00000016454	-	90	35.943	ENSSDUG00000007567	rnaseh2b	88	35.943	Seriola_dumerili
ENSCING00000016454	-	93	34.843	ENSSLDG00000012485	rnaseh2b	93	34.843	Seriola_lalandi_dorsalis
ENSCING00000016454	-	87	36.525	ENSSPUG00000006745	-	97	36.525	Sphenodon_punctatus
ENSCING00000016454	-	90	35.507	ENSSPAG00000020926	rnaseh2b	88	35.507	Stegastes_partitus
ENSCING00000016454	-	93	36.364	ENSSSCG00000024385	RNASEH2B	99	37.329	Sus_scrofa
ENSCING00000016454	-	88	39.286	ENSTGUG00000012104	RNASEH2B	97	39.286	Taeniopygia_guttata
ENSCING00000016454	-	93	36.620	ENSTRUG00000015098	rnaseh2b	90	36.620	Takifugu_rubripes
ENSCING00000016454	-	98	36.184	ENSTNIG00000013861	rnaseh2b	93	36.184	Tetraodon_nigroviridis
ENSCING00000016454	-	90	37.809	ENSUAMG00000022849	RNASEH2B	96	37.809	Ursus_americanus
ENSCING00000016454	-	90	37.102	ENSUMAG00000018556	RNASEH2B	96	37.102	Ursus_maritimus
ENSCING00000016454	-	82	39.313	ENSVPAG00000005679	RNASEH2B	86	40.230	Vicugna_pacos
ENSCING00000016454	-	90	36.972	ENSVVUG00000024015	RNASEH2B	81	38.028	Vulpes_vulpes
ENSCING00000016454	-	95	35.452	ENSXETG00000020720	rnaseh2b	94	35.452	Xenopus_tropicalis
ENSCING00000016454	-	81	36.653	ENSXCOG00000018732	rnaseh2b	83	35.857	Xiphophorus_couchianus
ENSCING00000016454	-	89	34.545	ENSXMAG00000022554	rnaseh2b	87	34.545	Xiphophorus_maculatus