EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000016481 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3585 bases
Position: chrHT000098.1:435955-439539
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000028534	DNA_pol_A_exo1	PF01612.20	6.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000028780	-	1830	-	ENSCINP00000028534	573 (aa)	-	F6YN96

Gene Model

Click here to download ENSCING00000016481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000016481	-	87	44.717	ENSG00000081177	EXD2	100	45.614	Homo_sapiens
ENSCING00000016481	-	92	42.143	ENSAPOG00000004053	exd2	86	42.321	Acanthochromis_polyacanthus
ENSCING00000016481	-	87	44.068	ENSAMEG00000014467	EXD2	84	44.068	Ailuropoda_melanoleuca
ENSCING00000016481	-	92	40.391	ENSACIG00000012036	exd2	87	41.606	Amphilophus_citrinellus
ENSCING00000016481	-	92	41.770	ENSAOCG00000008005	exd2	87	41.947	Amphiprion_ocellaris
ENSCING00000016481	-	92	41.398	ENSAPEG00000006784	exd2	86	41.935	Amphiprion_percula
ENSCING00000016481	-	89	42.096	ENSATEG00000019834	exd2	85	42.279	Anabas_testudineus
ENSCING00000016481	-	87	45.094	ENSAPLG00000003322	EXD2	98	45.094	Anas_platyrhynchos
ENSCING00000016481	-	86	46.008	ENSACAG00000005306	EXD2	84	46.008	Anolis_carolinensis
ENSCING00000016481	-	87	44.528	ENSANAG00000024026	EXD2	84	44.528	Aotus_nancymaae
ENSCING00000016481	-	89	41.252	ENSACLG00000000445	exd2	84	41.805	Astatotilapia_calliptera
ENSCING00000016481	-	88	43.566	ENSAMXG00000043700	exd2	83	43.566	Astyanax_mexicanus
ENSCING00000016481	-	87	43.396	ENSBTAG00000010052	EXD2	83	43.396	Bos_taurus
ENSCING00000016481	-	87	44.717	ENSCJAG00000014987	EXD2	84	44.717	Callithrix_jacchus
ENSCING00000016481	-	87	43.879	ENSCAFG00000016557	EXD2	84	43.879	Canis_familiaris
ENSCING00000016481	-	87	43.879	ENSCAFG00020005886	EXD2	84	43.879	Canis_lupus_dingo
ENSCING00000016481	-	87	43.503	ENSCHIG00000021919	EXD2	84	43.503	Capra_hircus
ENSCING00000016481	-	88	43.519	ENSTSYG00000002206	EXD2	86	43.519	Carlito_syrichta
ENSCING00000016481	-	87	44.045	ENSCAPG00000011298	EXD2	84	44.234	Cavia_aperea
ENSCING00000016481	-	87	44.045	ENSCPOG00000010018	EXD2	84	44.234	Cavia_porcellus
ENSCING00000016481	-	87	44.340	ENSCCAG00000032107	EXD2	84	44.340	Cebus_capucinus
ENSCING00000016481	-	87	44.717	ENSCATG00000030404	EXD2	84	44.717	Cercocebus_atys
ENSCING00000016481	-	85	44.487	ENSCLAG00000005648	EXD2	83	44.487	Chinchilla_lanigera
ENSCING00000016481	-	87	43.223	ENSCSAG00000013084	EXD2	85	43.223	Chlorocebus_sabaeus
ENSCING00000016481	-	90	42.674	ENSCPBG00000021585	EXD2	87	42.857	Chrysemys_picta_bellii
ENSCING00000016481	-	87	44.906	ENSCANG00000036359	EXD2	84	44.906	Colobus_angolensis_palliatus
ENSCING00000016481	-	87	44.569	ENSCGRG00001022081	Exd2	81	44.569	Cricetulus_griseus_chok1gshd
ENSCING00000016481	-	87	44.569	ENSCGRG00000010700	Exd2	82	44.569	Cricetulus_griseus_crigri
ENSCING00000016481	-	90	40.585	ENSCSEG00000009761	exd2	73	40.585	Cynoglossus_semilaevis
ENSCING00000016481	-	89	42.623	ENSCVAG00000016150	exd2	81	42.623	Cyprinodon_variegatus
ENSCING00000016481	-	88	42.351	ENSDARG00000016117	exd2	86	42.351	Danio_rerio
ENSCING00000016481	-	86	42.830	ENSDNOG00000046970	EXD2	84	42.830	Dasypus_novemcinctus
ENSCING00000016481	-	87	43.774	ENSDORG00000015087	Exd2	83	43.774	Dipodomys_ordii
ENSCING00000016481	-	86	40.763	FBgn0037901	CG6744	84	40.763	Drosophila_melanogaster
ENSCING00000016481	-	82	41.833	ENSETEG00000013803	EXD2	100	41.833	Echinops_telfairi
ENSCING00000016481	-	78	40.241	ENSEBUG00000013264	exd2	86	40.241	Eptatretus_burgeri
ENSCING00000016481	-	87	43.774	ENSEASG00005016586	EXD2	84	43.774	Equus_asinus_asinus
ENSCING00000016481	-	85	44.402	ENSECAG00000019103	EXD2	71	44.402	Equus_caballus
ENSCING00000016481	-	82	43.227	ENSEEUG00000007011	EXD2	100	43.227	Erinaceus_europaeus
ENSCING00000016481	-	88	42.561	ENSELUG00000022318	exd2	84	42.561	Esox_lucius
ENSCING00000016481	-	87	44.528	ENSFCAG00000014350	EXD2	84	44.528	Felis_catus
ENSCING00000016481	-	89	44.301	ENSFALG00000005050	EXD2	86	44.301	Ficedula_albicollis
ENSCING00000016481	-	87	43.100	ENSFDAG00000009719	EXD2	85	43.100	Fukomys_damarensis
ENSCING00000016481	-	92	41.607	ENSFHEG00000010499	exd2	86	41.786	Fundulus_heteroclitus
ENSCING00000016481	-	62	40.822	ENSGMOG00000005937	exd2	83	40.872	Gadus_morhua
ENSCING00000016481	-	85	46.169	ENSGALG00000009456	EXD2	83	46.169	Gallus_gallus
ENSCING00000016481	-	89	42.701	ENSGAFG00000017943	exd2	84	42.701	Gambusia_affinis
ENSCING00000016481	-	84	41.569	ENSGACG00000005358	exd2	99	41.569	Gasterosteus_aculeatus
ENSCING00000016481	-	88	44.052	ENSGAGG00000023895	EXD2	86	44.052	Gopherus_agassizii
ENSCING00000016481	-	87	44.717	ENSGGOG00000001258	EXD2	84	44.717	Gorilla_gorilla
ENSCING00000016481	-	89	41.252	ENSHBUG00000019366	exd2	84	41.805	Haplochromis_burtoni
ENSCING00000016481	-	87	43.019	ENSHGLG00000008157	EXD2	83	43.019	Heterocephalus_glaber_female
ENSCING00000016481	-	87	43.019	ENSHGLG00100003936	EXD2	83	43.019	Heterocephalus_glaber_male
ENSCING00000016481	-	89	40.472	ENSHCOG00000018905	exd2	86	40.472	Hippocampus_comes
ENSCING00000016481	-	88	43.123	ENSIPUG00000000560	exd2	84	43.123	Ictalurus_punctatus
ENSCING00000016481	-	87	43.879	ENSSTOG00000000175	EXD2	83	43.879	Ictidomys_tridecemlineatus
ENSCING00000016481	-	53	41.124	ENSJJAG00000021417	-	77	41.124	Jaculus_jaculus
ENSCING00000016481	-	89	42.096	ENSKMAG00000016785	exd2	84	42.096	Kryptolebias_marmoratus
ENSCING00000016481	-	89	41.166	ENSLBEG00000028400	exd2	84	41.530	Labrus_bergylta
ENSCING00000016481	-	88	40.816	ENSLACG00000018609	EXD2	85	40.816	Latimeria_chalumnae
ENSCING00000016481	-	89	44.052	ENSLOCG00000013376	exd2	86	44.052	Lepisosteus_oculatus
ENSCING00000016481	-	85	44.828	ENSLAFG00000018508	EXD2	98	44.643	Loxodonta_africana
ENSCING00000016481	-	87	44.717	ENSMFAG00000041413	EXD2	84	44.717	Macaca_fascicularis
ENSCING00000016481	-	87	44.717	ENSMMUG00000020514	EXD2	84	44.717	Macaca_mulatta
ENSCING00000016481	-	87	44.717	ENSMNEG00000038561	EXD2	84	44.717	Macaca_nemestrina
ENSCING00000016481	-	87	44.717	ENSMLEG00000044130	EXD2	84	44.717	Mandrillus_leucophaeus
ENSCING00000016481	-	89	41.499	ENSMAMG00000000136	exd2	84	41.499	Mastacembelus_armatus
ENSCING00000016481	-	89	40.876	ENSMZEG00005011274	exd2	84	41.423	Maylandia_zebra
ENSCING00000016481	-	86	45.369	ENSMGAG00000011874	EXD2	84	45.369	Meleagris_gallopavo
ENSCING00000016481	-	87	38.547	ENSMICG00000009606	EXD2	85	38.547	Microcebus_murinus
ENSCING00000016481	-	87	43.421	ENSMOCG00000019497	Exd2	83	43.421	Microtus_ochrogaster
ENSCING00000016481	-	90	41.636	ENSMMOG00000000384	exd2	90	41.636	Mola_mola
ENSCING00000016481	-	86	41.667	ENSMODG00000010228	EXD2	85	41.667	Monodelphis_domestica
ENSCING00000016481	-	89	40.809	ENSMALG00000022371	exd2	84	40.625	Monopterus_albus
ENSCING00000016481	-	87	43.691	ENSMUSG00000032705	Exd2	100	46.429	Mus_musculus
ENSCING00000016481	-	87	44.068	MGP_PahariEiJ_G0029652	Exd2	82	44.068	Mus_pahari
ENSCING00000016481	-	87	43.879	MGP_SPRETEiJ_G0018741	Exd2	81	43.985	Mus_spretus
ENSCING00000016481	-	89	44.199	ENSMPUG00000007368	EXD2	86	44.199	Mustela_putorius_furo
ENSCING00000016481	-	84	43.555	ENSMLUG00000011848	EXD2	99	43.555	Myotis_lucifugus
ENSCING00000016481	-	89	41.058	ENSNBRG00000004615	exd2	89	41.241	Neolamprologus_brichardi
ENSCING00000016481	-	87	44.528	ENSNLEG00000001275	EXD2	84	44.528	Nomascus_leucogenys
ENSCING00000016481	-	82	44.622	ENSOPRG00000000078	EXD2	100	44.622	Ochotona_princeps
ENSCING00000016481	-	85	43.738	ENSODEG00000014245	EXD2	83	43.738	Octodon_degus
ENSCING00000016481	-	87	42.105	ENSONIG00000000385	exd2	84	41.423	Oreochromis_niloticus
ENSCING00000016481	-	84	35.067	ENSOANG00000012621	EXD2	100	35.067	Ornithorhynchus_anatinus
ENSCING00000016481	-	89	43.094	ENSOCUG00000006626	EXD2	84	43.094	Oryctolagus_cuniculus
ENSCING00000016481	-	89	41.697	ENSORLG00000019790	exd2	85	41.513	Oryzias_latipes
ENSCING00000016481	-	89	41.697	ENSORLG00020004434	exd2	85	41.513	Oryzias_latipes_hni
ENSCING00000016481	-	90	41.651	ENSORLG00015001003	exd2	85	41.468	Oryzias_latipes_hsok
ENSCING00000016481	-	89	41.774	ENSOMEG00000023552	exd2	84	41.774	Oryzias_melastigma
ENSCING00000016481	-	87	43.019	ENSOGAG00000012059	EXD2	84	43.019	Otolemur_garnettii
ENSCING00000016481	-	87	43.503	ENSOARG00000021181	EXD2	84	43.503	Ovis_aries
ENSCING00000016481	-	87	44.528	ENSPPAG00000042293	EXD2	84	44.528	Pan_paniscus
ENSCING00000016481	-	87	44.340	ENSPPRG00000002946	EXD2	84	44.340	Panthera_pardus
ENSCING00000016481	-	87	44.340	ENSPTIG00000018876	EXD2	84	44.340	Panthera_tigris_altaica
ENSCING00000016481	-	87	44.717	ENSPTRG00000006480	EXD2	100	44.422	Pan_troglodytes
ENSCING00000016481	-	87	44.717	ENSPANG00000025013	EXD2	84	44.717	Papio_anubis
ENSCING00000016481	-	88	43.364	ENSPKIG00000007907	exd2	83	43.364	Paramormyrops_kingsleyae
ENSCING00000016481	-	87	42.453	ENSPSIG00000010111	EXD2	84	42.642	Pelodiscus_sinensis
ENSCING00000016481	-	89	41.712	ENSPMGG00000021023	exd2	86	41.894	Periophthalmus_magnuspinnatus
ENSCING00000016481	-	89	42.541	ENSPFOG00000004789	exd2	87	42.105	Poecilia_formosa
ENSCING00000016481	-	89	42.279	ENSPLAG00000020798	exd2	84	42.279	Poecilia_latipinna
ENSCING00000016481	-	89	42.153	ENSPMEG00000006063	exd2	84	42.153	Poecilia_mexicana
ENSCING00000016481	-	89	42.701	ENSPREG00000008479	exd2	88	42.701	Poecilia_reticulata
ENSCING00000016481	-	87	44.528	ENSPPYG00000005937	EXD2	84	44.528	Pongo_abelii
ENSCING00000016481	-	80	44.737	ENSPCAG00000007242	EXD2	98	44.737	Procavia_capensis
ENSCING00000016481	-	87	43.126	ENSPCOG00000028702	EXD2	85	43.126	Propithecus_coquereli
ENSCING00000016481	-	82	44.024	ENSPVAG00000016901	EXD2	100	44.024	Pteropus_vampyrus
ENSCING00000016481	-	89	41.252	ENSPNYG00000010343	exd2	84	41.805	Pundamilia_nyererei
ENSCING00000016481	-	88	42.007	ENSPNAG00000009476	exd2	84	42.379	Pygocentrus_nattereri
ENSCING00000016481	-	87	44.068	ENSRNOG00000027707	Exd2	81	44.068	Rattus_norvegicus
ENSCING00000016481	-	87	45.094	ENSRBIG00000031108	EXD2	84	45.094	Rhinopithecus_bieti
ENSCING00000016481	-	87	45.094	ENSRROG00000033249	EXD2	84	45.094	Rhinopithecus_roxellana
ENSCING00000016481	-	87	44.906	ENSSBOG00000035171	EXD2	84	44.906	Saimiri_boliviensis_boliviensis
ENSCING00000016481	-	86	43.130	ENSSHAG00000005008	EXD2	85	42.991	Sarcophilus_harrisii
ENSCING00000016481	-	93	39.860	ENSSFOG00015006470	exd2	87	40.385	Scleropages_formosus
ENSCING00000016481	-	88	38.139	ENSSMAG00000009321	exd2	83	37.956	Scophthalmus_maximus
ENSCING00000016481	-	92	41.324	ENSSDUG00000001321	exd2	92	41.682	Seriola_dumerili
ENSCING00000016481	-	92	41.250	ENSSLDG00000011348	exd2	86	41.607	Seriola_lalandi_dorsalis
ENSCING00000016481	-	70	45.238	ENSSARG00000012747	EXD2	87	45.238	Sorex_araneus
ENSCING00000016481	-	83	43.393	ENSSPUG00000002120	EXD2	98	43.393	Sphenodon_punctatus
ENSCING00000016481	-	89	42.463	ENSSPAG00000002512	exd2	86	42.500	Stegastes_partitus
ENSCING00000016481	-	89	42.620	ENSSSCG00000002305	EXD2	95	42.969	Sus_scrofa
ENSCING00000016481	-	88	43.970	ENSTGUG00000011469	EXD2	86	43.970	Taeniopygia_guttata
ENSCING00000016481	-	90	42.202	ENSTRUG00000003672	exd2	87	42.752	Takifugu_rubripes
ENSCING00000016481	-	92	40.860	ENSTNIG00000003046	exd2	98	41.039	Tetraodon_nigroviridis
ENSCING00000016481	-	80	44.242	ENSTTRG00000013954	EXD2	98	44.242	Tursiops_truncatus
ENSCING00000016481	-	87	44.068	ENSUAMG00000010774	EXD2	84	44.068	Ursus_americanus
ENSCING00000016481	-	86	44.045	ENSUMAG00000010083	EXD2	84	44.045	Ursus_maritimus
ENSCING00000016481	-	69	43.192	ENSVPAG00000005658	EXD2	99	43.192	Vicugna_pacos
ENSCING00000016481	-	87	43.879	ENSVVUG00000003704	EXD2	84	43.879	Vulpes_vulpes
ENSCING00000016481	-	88	43.609	ENSXETG00000017930	exd2	85	43.609	Xenopus_tropicalis
ENSCING00000016481	-	59	40.327	ENSXCOG00000014338	exd2	61	40.327	Xiphophorus_couchianus
ENSCING00000016481	-	89	42.910	ENSXMAG00000003565	exd2	84	42.910	Xiphophorus_maculatus