EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000016625 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
5038 bases
Position
chr12:4632227-4637264
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000013154Prp19PF08606.111.5e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000013154-1311-ENSCINP00000013154437 (aa)-F6RKQ2
Gene Model
Click here to download ENSCING00000016625's gene model file
Pathways
Pathway IDPathway NameSource
cin03040SpliceosomeKEGG
cin04120Ubiquitin mediated proteolysisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016625's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000016625-9968.349ENSG00000110107PRPF1910069.231Homo_sapiens
ENSCING00000016625-10068.254ENSAPOG00000017823prpf1910068.905Acanthochromis_polyacanthus
ENSCING00000016625-9967.890ENSAMEG00000007375PRPF198767.890Ailuropoda_melanoleuca
ENSCING00000016625-9969.195ENSACIG00000015876prpf199869.195Amphilophus_citrinellus
ENSCING00000016625-10068.481ENSAOCG00000020444prpf199968.481Amphiprion_ocellaris
ENSCING00000016625-10068.481ENSAPEG00000016076prpf199968.481Amphiprion_percula
ENSCING00000016625-10068.481ENSATEG00000008840prpf199968.481Anabas_testudineus
ENSCING00000016625-9968.578ENSACAG00000017797PRPF199968.578Anolis_carolinensis
ENSCING00000016625-9968.119ENSANAG00000021762PRPF198768.119Aotus_nancymaae
ENSCING00000016625-10068.934ENSACLG00000009416prpf1910069.652Astatotilapia_calliptera
ENSCING00000016625-10067.946ENSAMXG00000011547prpf199968.481Astyanax_mexicanus
ENSCING00000016625-9968.119ENSBTAG00000014366PRPF198768.119Bos_taurus
ENSCING00000016625-9751.981WBGene00020423prp-199951.981Caenorhabditis_elegans
ENSCING00000016625-9968.349ENSCJAG00000016509PRPF198768.349Callithrix_jacchus
ENSCING00000016625-9967.890ENSCAFG00000016438PRPF198567.890Canis_familiaris
ENSCING00000016625-9967.890ENSCAFG00020012565PRPF198767.890Canis_lupus_dingo
ENSCING00000016625-9968.119ENSCHIG00000018281PRPF198768.119Capra_hircus
ENSCING00000016625-10068.182ENSTSYG00000006860PRPF198768.421Carlito_syrichta
ENSCING00000016625-9968.349ENSCAPG00000016225PRPF199968.349Cavia_aperea
ENSCING00000016625-9968.119ENSCPOG00000020688PRPF199968.119Cavia_porcellus
ENSCING00000016625-9968.349ENSCCAG00000025839PRPF198768.349Cebus_capucinus
ENSCING00000016625-9968.349ENSCATG00000041921PRPF198768.349Cercocebus_atys
ENSCING00000016625-9968.349ENSCLAG00000003338PRPF1910068.276Chinchilla_lanigera
ENSCING00000016625-9968.349ENSCSAG00000006254PRPF198768.349Chlorocebus_sabaeus
ENSCING00000016625-6956.721ENSCHOG00000005840PRPF199856.721Choloepus_hoffmanni
ENSCING00000016625-9968.046ENSCPBG00000027061PRPF198967.661Chrysemys_picta_bellii
ENSCING00000016625-9989.583ENSCSAVG00000002027-8690.046Ciona_savignyi
ENSCING00000016625-9982.105ENSCANG00000027155PRPF199982.105Colobus_angolensis_palliatus
ENSCING00000016625-9968.119ENSCGRG00001002699Prpf198768.119Cricetulus_griseus_chok1gshd
ENSCING00000016625-9967.963ENSCGRG00000008964Prpf198767.963Cricetulus_griseus_crigri
ENSCING00000016625-10068.636ENSCSEG00000010411prpf199968.636Cynoglossus_semilaevis
ENSCING00000016625-10067.873ENSCVAG00000012011prpf199968.172Cyprinodon_variegatus
ENSCING00000016625-10066.667ENSDARG00000015239prpf199968.027Danio_rerio
ENSCING00000016625-9968.349ENSDNOG00000005797PRPF198968.349Dasypus_novemcinctus
ENSCING00000016625-9968.349ENSDORG00000006906Prpf198768.349Dipodomys_ordii
ENSCING00000016625-9963.158FBgn0261119Prp199963.158Drosophila_melanogaster
ENSCING00000016625-9472.289ENSETEG00000012295PRPF198672.289Echinops_telfairi
ENSCING00000016625-8168.539ENSEBUG00000013075prpf1910068.539Eptatretus_burgeri
ENSCING00000016625-9968.119ENSEASG00005008056PRPF198968.119Equus_asinus_asinus
ENSCING00000016625-9968.119ENSECAG00000007322PRPF198768.119Equus_caballus
ENSCING00000016625-9968.778ENSELUG00000020276-9968.778Esox_lucius
ENSCING00000016625-9368.116ENSELUG00000004578prpf198668.116Esox_lucius
ENSCING00000016625-9967.890ENSFCAG00000013668PRPF198767.890Felis_catus
ENSCING00000016625-9968.119ENSFALG00000012084PRPF198768.119Ficedula_albicollis
ENSCING00000016625-8269.167ENSFDAG00000009420PRPF199669.167Fukomys_damarensis
ENSCING00000016625-10067.800ENSFHEG00000022135prpf199967.800Fundulus_heteroclitus
ENSCING00000016625-10069.615ENSGMOG00000014756prpf199969.615Gadus_morhua
ENSCING00000016625-9968.119ENSGALG00000036530PRPF198768.119Gallus_gallus
ENSCING00000016625-10068.481ENSGAFG00000008931prpf199968.481Gambusia_affinis
ENSCING00000016625-10068.707ENSGACG00000017976prpf199968.707Gasterosteus_aculeatus
ENSCING00000016625-9968.119ENSGAGG00000013328PRPF198767.890Gopherus_agassizii
ENSCING00000016625-9968.349ENSGGOG00000008648PRPF198768.349Gorilla_gorilla
ENSCING00000016625-10068.934ENSHBUG00000008394prpf199968.934Haplochromis_burtoni
ENSCING00000016625-9967.890ENSHGLG00000003934PRPF199967.890Heterocephalus_glaber_female
ENSCING00000016625-9954.654ENSHGLG00100010649PRPF1910054.654Heterocephalus_glaber_male
ENSCING00000016625-9967.800ENSHCOG00000016720prpf199968.707Hippocampus_comes
ENSCING00000016625-10067.800ENSIPUG00000013084prpf199967.800Ictalurus_punctatus
ENSCING00000016625-9968.349ENSSTOG00000001598PRPF198768.349Ictidomys_tridecemlineatus
ENSCING00000016625-9968.506ENSJJAG00000020609Prpf198768.506Jaculus_jaculus
ENSCING00000016625-10067.800ENSKMAG00000010257prpf199967.800Kryptolebias_marmoratus
ENSCING00000016625-9969.108ENSLBEG00000027436prpf199969.108Labrus_bergylta
ENSCING00000016625-9968.807ENSLACG00000003434PRPF199968.807Latimeria_chalumnae
ENSCING00000016625-9060.396ENSLOCG00000008123prpf199960.442Lepisosteus_oculatus
ENSCING00000016625-9965.342ENSLAFG00000002644PRPF198765.342Loxodonta_africana
ENSCING00000016625-9968.349ENSMFAG00000036743PRPF198768.349Macaca_fascicularis
ENSCING00000016625-9968.349ENSMMUG00000014530PRPF199763.525Macaca_mulatta
ENSCING00000016625-9968.349ENSMNEG00000044485PRPF198768.349Macaca_nemestrina
ENSCING00000016625-9968.349ENSMLEG00000043312PRPF198768.349Mandrillus_leucophaeus
ENSCING00000016625-9968.879ENSMAMG00000006843prpf1910069.403Mastacembelus_armatus
ENSCING00000016625-10068.934ENSMZEG00005013356prpf199968.934Maylandia_zebra
ENSCING00000016625-9866.210ENSMGAG00000003180PRPF199066.210Meleagris_gallopavo
ENSCING00000016625-9967.963ENSMAUG00000012585Prpf198767.963Mesocricetus_auratus
ENSCING00000016625-9968.349ENSMICG00000011236PRPF198768.349Microcebus_murinus
ENSCING00000016625-9968.119ENSMOCG00000010383Prpf198768.119Microtus_ochrogaster
ENSCING00000016625-10068.864ENSMMOG00000003138prpf199968.864Mola_mola
ENSCING00000016625-9968.349ENSMODG00000020338PRPF198768.349Monodelphis_domestica
ENSCING00000016625-9962.806ENSMALG00000010981prpf199862.806Monopterus_albus
ENSCING00000016625-9968.119MGP_CAROLIEiJ_G0022704Prpf198768.119Mus_caroli
ENSCING00000016625-9968.119ENSMUSG00000024735Prpf198768.119Mus_musculus
ENSCING00000016625-9968.119MGP_PahariEiJ_G0014198Prpf198768.119Mus_pahari
ENSCING00000016625-9968.119MGP_SPRETEiJ_G0023618Prpf198768.119Mus_spretus
ENSCING00000016625-9967.890ENSMPUG00000014432PRPF198767.890Mustela_putorius_furo
ENSCING00000016625-9964.745ENSMLUG00000017597PRPF198764.745Myotis_lucifugus
ENSCING00000016625-9968.349ENSNGAG00000012671Prpf198768.349Nannospalax_galili
ENSCING00000016625-10068.934ENSNBRG00000000055prpf199968.934Neolamprologus_brichardi
ENSCING00000016625-9968.506ENSNLEG00000013618PRPF198768.506Nomascus_leucogenys
ENSCING00000016625-9968.506ENSOPRG00000008630PRPF198868.506Ochotona_princeps
ENSCING00000016625-9968.119ENSODEG00000004043PRPF199968.119Octodon_degus
ENSCING00000016625-10068.934ENSONIG00000004880prpf199968.934Oreochromis_niloticus
ENSCING00000016625-9965.208ENSOCUG00000015689PRPF198765.208Oryctolagus_cuniculus
ENSCING00000016625-10068.481ENSORLG00000004666prpf199968.481Oryzias_latipes
ENSCING00000016625-10068.481ENSORLG00020013561prpf199968.481Oryzias_latipes_hni
ENSCING00000016625-10068.481ENSORLG00015022196prpf199968.481Oryzias_latipes_hsok
ENSCING00000016625-10068.027ENSOMEG00000004424prpf199969.037Oryzias_melastigma
ENSCING00000016625-9968.349ENSOGAG00000016756PRPF198768.349Otolemur_garnettii
ENSCING00000016625-9968.119ENSOARG00000015596PRPF198768.119Ovis_aries
ENSCING00000016625-9968.100ENSPPAG00000030246PRPF198768.100Pan_paniscus
ENSCING00000016625-9967.890ENSPPRG00000002470PRPF198767.890Panthera_pardus
ENSCING00000016625-9968.046ENSPTIG00000006541PRPF198668.046Panthera_tigris_altaica
ENSCING00000016625-9968.349ENSPTRG00000003724PRPF198768.349Pan_troglodytes
ENSCING00000016625-9968.349ENSPANG00000002762PRPF198768.349Papio_anubis
ENSCING00000016625-9968.337ENSPKIG00000019715prpf199968.337Paramormyrops_kingsleyae
ENSCING00000016625-8168.347ENSPSIG00000007497PRPF198568.347Pelodiscus_sinensis
ENSCING00000016625-10068.864ENSPMGG00000017527prpf199968.864Periophthalmus_magnuspinnatus
ENSCING00000016625-9968.192ENSPEMG00000019270Prpf198768.192Peromyscus_maniculatus_bairdii
ENSCING00000016625-10068.182ENSPCIG00000003485PRPF197468.182Phascolarctos_cinereus
ENSCING00000016625-10068.481ENSPFOG00000002558prpf199968.481Poecilia_formosa
ENSCING00000016625-10068.481ENSPLAG00000017942prpf199968.481Poecilia_latipinna
ENSCING00000016625-10068.481ENSPMEG00000008638prpf199968.481Poecilia_mexicana
ENSCING00000016625-9968.879ENSPREG00000002489prpf199568.879Poecilia_reticulata
ENSCING00000016625-9968.349ENSPPYG00000003202PRPF198368.349Pongo_abelii
ENSCING00000016625-9967.890ENSPCAG00000001930PRPF198667.890Procavia_capensis
ENSCING00000016625-9968.349ENSPCOG00000014017PRPF199268.349Propithecus_coquereli
ENSCING00000016625-9967.890ENSPVAG00000014669PRPF198767.890Pteropus_vampyrus
ENSCING00000016625-10068.934ENSPNYG00000000859prpf199968.934Pundamilia_nyererei
ENSCING00000016625-10068.934ENSPNAG00000019245prpf199968.934Pygocentrus_nattereri
ENSCING00000016625-9968.119ENSRNOG00000020897Prpf198768.119Rattus_norvegicus
ENSCING00000016625-9968.349ENSRBIG00000036672PRPF198768.349Rhinopithecus_bieti
ENSCING00000016625-9968.349ENSRROG00000041572PRPF198768.349Rhinopithecus_roxellana
ENSCING00000016625-9968.349ENSSBOG00000022840PRPF198768.349Saimiri_boliviensis_boliviensis
ENSCING00000016625-9968.578ENSSHAG00000009462PRPF198768.578Sarcophilus_harrisii
ENSCING00000016625-9968.807ENSSFOG00015001236prpf199968.807Scleropages_formosus
ENSCING00000016625-10068.707ENSSMAG00000002273prpf199968.707Scophthalmus_maximus
ENSCING00000016625-10068.707ENSSDUG00000003299prpf199968.707Seriola_dumerili
ENSCING00000016625-10068.707ENSSLDG00000003019prpf199968.707Seriola_lalandi_dorsalis
ENSCING00000016625-9968.578ENSSPUG00000019328PRPF198768.578Sphenodon_punctatus
ENSCING00000016625-10068.481ENSSPAG00000008546prpf199968.481Stegastes_partitus
ENSCING00000016625-9968.119ENSSSCG00000013107PRPF198768.119Sus_scrofa
ENSCING00000016625-9968.349ENSTGUG00000006319PRPF198768.349Taeniopygia_guttata
ENSCING00000016625-10067.800ENSTRUG00000008502prpf199967.800Takifugu_rubripes
ENSCING00000016625-6369.455ENSTNIG00000014219prpf199969.455Tetraodon_nigroviridis
ENSCING00000016625-9967.890ENSTTRG00000012476PRPF198667.890Tursiops_truncatus
ENSCING00000016625-9967.890ENSUAMG00000011280PRPF198767.890Ursus_americanus
ENSCING00000016625-8268.889ENSUMAG00000011609PRPF197168.889Ursus_maritimus
ENSCING00000016625-9967.586ENSVPAG00000010516PRPF199667.586Vicugna_pacos
ENSCING00000016625-9967.890ENSVVUG00000005291PRPF198767.890Vulpes_vulpes
ENSCING00000016625-9867.593ENSXETG00000011938prpf199867.593Xenopus_tropicalis
ENSCING00000016625-10068.481ENSXCOG00000003141prpf199968.481Xiphophorus_couchianus
ENSCING00000016625-10068.481ENSXMAG00000008485prpf199968.481Xiphophorus_maculatus

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