EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000016816 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
5307 bases
Position
chr5:418317-423623
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000015203RRM_1PF00076.222.8e-1211
ENSCINP00000028896RRM_1PF00076.222.8e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000029142-1111-ENSCINP00000028896323 (aa)-F6QSU4
ENSCINT00000015203-1235-ENSCINP00000015203329 (aa)-F6RZE8
Gene Model
Click here to download ENSCING00000016816's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016816's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000016816-9535.694ENSG00000063046EIF4B9044.643Homo_sapiens
ENSCING00000016816-6738.494ENSAPOG00000022990eif4bb6134.165Acanthochromis_polyacanthus
ENSCING00000016816-9534.805ENSAMEG00000012023EIF4B6135.567Ailuropoda_melanoleuca
ENSCING00000016816-5640.097ENSACIG00000015658eif4bb6234.474Amphilophus_citrinellus
ENSCING00000016816-6439.316ENSAOCG00000000713eif4bb6133.416Amphiprion_ocellaris
ENSCING00000016816-6439.316ENSAPEG00000004732eif4bb6133.167Amphiprion_percula
ENSCING00000016816-6336.842ENSATEG00000024049eif4bb6535.128Anabas_testudineus
ENSCING00000016816-7839.796ENSACAG00000011869EIF4B5932.891Anolis_carolinensis
ENSCING00000016816-9533.973ENSANAG00000032230-9334.153Aotus_nancymaae
ENSCING00000016816-9134.161ENSANAG00000026408-5734.268Aotus_nancymaae
ENSCING00000016816-9735.817ENSANAG00000030795-7935.588Aotus_nancymaae
ENSCING00000016816-9534.545ENSANAG00000021956-9834.555Aotus_nancymaae
ENSCING00000016816-8233.808ENSANAG00000022099-5134.520Aotus_nancymaae
ENSCING00000016816-9534.400ENSANAG00000027568-8234.840Aotus_nancymaae
ENSCING00000016816-9234.254ENSACLG00000009013eif4bb6832.884Astatotilapia_calliptera
ENSCING00000016816-9433.521ENSAMXG00000034236eif4bb6134.190Astyanax_mexicanus
ENSCING00000016816-9439.583ENSAMXG00000041675eif4ba6932.402Astyanax_mexicanus
ENSCING00000016816-9735.459ENSBTAG00000006883EIF4B6535.567Bos_taurus
ENSCING00000016816-5739.409ENSCJAG00000046740-9139.109Callithrix_jacchus
ENSCING00000016816-9534.545ENSCJAG00000018176EIF4B9834.555Callithrix_jacchus
ENSCING00000016816-9534.545ENSCAFG00000007117EIF4B6135.309Canis_familiaris
ENSCING00000016816-9533.898ENSCHIG00000016477-5634.366Capra_hircus
ENSCING00000016816-9535.325ENSCHIG00000012380-6135.567Capra_hircus
ENSCING00000016816-9330.904ENSTSYG00000030094-7737.063Carlito_syrichta
ENSCING00000016816-9534.805ENSTSYG00000012880-6135.309Carlito_syrichta
ENSCING00000016816-9531.877ENSCAPG00000009384-7433.504Cavia_aperea
ENSCING00000016816-9531.510ENSCPOG00000021782-6733.333Cavia_porcellus
ENSCING00000016816-9533.163ENSCPOG00000005595-6234.527Cavia_porcellus
ENSCING00000016816-9533.766ENSCCAG00000035872-9833.770Cebus_capucinus
ENSCING00000016816-9532.308ENSCCAG00000028899-9333.247Cebus_capucinus
ENSCING00000016816-9536.207ENSCATG00000032007-6135.789Cercocebus_atys
ENSCING00000016816-9532.622ENSCATG00000038513-5533.030Cercocebus_atys
ENSCING00000016816-9533.787ENSCATG00000032438-8142.500Cercocebus_atys
ENSCING00000016816-9733.417ENSCLAG00000013741EIF4B6234.527Chinchilla_lanigera
ENSCING00000016816-9534.545ENSCSAG00000005574-6135.309Chlorocebus_sabaeus
ENSCING00000016816-9533.155ENSCSAG00000007929-6134.392Chlorocebus_sabaeus
ENSCING00000016816-9932.161ENSCSAG00000014290-6131.877Chlorocebus_sabaeus
ENSCING00000016816-9534.545ENSCHOG00000001608EIF4B6135.309Choloepus_hoffmanni
ENSCING00000016816-9531.675ENSCPBG00000019649EIF4B6133.246Chrysemys_picta_bellii
ENSCING00000016816-9455.932ENSCSAVG00000001078-5556.231Ciona_savignyi
ENSCING00000016816-9130.641ENSCANG00000042944-8740.373Colobus_angolensis_palliatus
ENSCING00000016816-6340.265ENSCANG00000035779-9440.000Colobus_angolensis_palliatus
ENSCING00000016816-9533.766ENSCANG00000027371-6134.536Colobus_angolensis_palliatus
ENSCING00000016816-9232.865ENSCANG00000037506-6032.961Colobus_angolensis_palliatus
ENSCING00000016816-9534.545ENSCGRG00001014070Eif4b6135.309Cricetulus_griseus_chok1gshd
ENSCING00000016816-9534.545ENSCGRG00000008920Eif4b6135.309Cricetulus_griseus_crigri
ENSCING00000016816-9134.254ENSCSEG00000004853eif4bb9435.106Cynoglossus_semilaevis
ENSCING00000016816-8245.455ENSCVAG00000021559eif4bb6035.550Cyprinodon_variegatus
ENSCING00000016816-9533.069ENSDARG00000017439eif4ba6933.850Danio_rerio
ENSCING00000016816-9437.288ENSDARG00000010194eif4bb6732.824Danio_rerio
ENSCING00000016816-9534.715ENSDORG00000004008Eif4b6134.884Dipodomys_ordii
ENSCING00000016816-9535.843FBgn0020660eIF4B8436.937Drosophila_melanogaster
ENSCING00000016816-9631.165ENSEBUG00000007785-6431.565Eptatretus_burgeri
ENSCING00000016816-9534.545ENSEASG00005009268EIF4B6135.309Equus_asinus_asinus
ENSCING00000016816-9534.974ENSECAG00000024091EIF4B5835.309Equus_caballus
ENSCING00000016816-8643.784ENSELUG00000012490eif4ba5549.206Esox_lucius
ENSCING00000016816-6241.379ENSELUG00000011962eif4bb6134.321Esox_lucius
ENSCING00000016816-9534.545ENSFCAG00000000300EIF4B6435.309Felis_catus
ENSCING00000016816-7149.231ENSFALG00000004382EIF4B5934.031Ficedula_albicollis
ENSCING00000016816-9533.426ENSFDAG00000014529-6034.540Fukomys_damarensis
ENSCING00000016816-9533.420ENSFDAG00000009048-6135.065Fukomys_damarensis
ENSCING00000016816-8345.455ENSFHEG00000006923eif4bb6133.251Fundulus_heteroclitus
ENSCING00000016816-6637.860ENSGMOG00000019470eif4bb6033.069Gadus_morhua
ENSCING00000016816-6239.823ENSGAFG00000008327eif4bb6134.271Gambusia_affinis
ENSCING00000016816-6340.000ENSGACG00000008010eif4bb6034.301Gasterosteus_aculeatus
ENSCING00000016816-9432.234ENSGAGG00000025237EIF4B6033.508Gopherus_agassizii
ENSCING00000016816-9534.286ENSGGOG00000013695EIF4B9634.884Gorilla_gorilla
ENSCING00000016816-9534.060ENSGGOG00000037011-8842.515Gorilla_gorilla
ENSCING00000016816-6137.500ENSGGOG00000040010-9537.778Gorilla_gorilla
ENSCING00000016816-9731.978ENSGGOG00000037535-6232.869Gorilla_gorilla
ENSCING00000016816-9031.608ENSGGOG00000004382-8343.478Gorilla_gorilla
ENSCING00000016816-9531.988ENSGGOG00000036580-6032.440Gorilla_gorilla
ENSCING00000016816-9232.533ENSHBUG00000023345eif4bb6332.642Haplochromis_burtoni
ENSCING00000016816-9530.133ENSHGLG00000007993-6030.585Heterocephalus_glaber_female
ENSCING00000016816-5237.173ENSHGLG00000003859-8837.500Heterocephalus_glaber_female
ENSCING00000016816-9734.037ENSHGLG00000004627-6034.316Heterocephalus_glaber_female
ENSCING00000016816-9533.420ENSHGLG00100008532-6135.325Heterocephalus_glaber_male
ENSCING00000016816-5237.173ENSHGLG00100001246-8837.500Heterocephalus_glaber_male
ENSCING00000016816-9632.174ENSHGLG00100001656-5832.164Heterocephalus_glaber_male
ENSCING00000016816-9732.902ENSHGLG00100000821-6032.895Heterocephalus_glaber_male
ENSCING00000016816-8738.326ENSHCOG00000010594eif4bb6135.219Hippocampus_comes
ENSCING00000016816-8738.362ENSIPUG00000006890eif4b6232.990Ictalurus_punctatus
ENSCING00000016816-9332.626ENSIPUG00000020173EIF4B6134.748Ictalurus_punctatus
ENSCING00000016816-9534.400ENSSTOG00000029945-6035.279Ictidomys_tridecemlineatus
ENSCING00000016816-9636.872ENSSTOG00000006800-6038.483Ictidomys_tridecemlineatus
ENSCING00000016816-9734.271ENSJJAG00000021178Eif4b6235.052Jaculus_jaculus
ENSCING00000016816-6338.034ENSKMAG00000001027eif4bb6134.005Kryptolebias_marmoratus
ENSCING00000016816-6337.391ENSLBEG00000020534eif4bb8037.450Labrus_bergylta
ENSCING00000016816-8742.105ENSLACG00000017403EIF4B5832.474Latimeria_chalumnae
ENSCING00000016816-9534.021ENSLOCG00000005500eif4ba6034.896Lepisosteus_oculatus
ENSCING00000016816-9533.933ENSLAFG00000009534EIF4B6135.309Loxodonta_africana
ENSCING00000016816-9534.726ENSMFAG00000044995-8840.000Macaca_fascicularis
ENSCING00000016816-9534.715ENSMFAG00000037195-6035.584Macaca_fascicularis
ENSCING00000016816-9534.204ENSMMUG00000042124-9334.805Macaca_mulatta
ENSCING00000016816-9531.063ENSMMUG00000008391-6132.075Macaca_mulatta
ENSCING00000016816-5641.584ENSMMUG00000037830-9340.654Macaca_mulatta
ENSCING00000016816-9534.986ENSMMUG00000001062EIF4B8642.667Macaca_mulatta
ENSCING00000016816-5639.512ENSMNEG00000028622-8942.012Macaca_nemestrina
ENSCING00000016816-9731.143ENSMNEG00000027441-9330.857Macaca_nemestrina
ENSCING00000016816-9531.063ENSMNEG00000040490-6031.436Macaca_nemestrina
ENSCING00000016816-9533.943ENSMNEG00000043577-9334.286Macaca_nemestrina
ENSCING00000016816-9437.730ENSMNEG00000029195-5537.846Macaca_nemestrina
ENSCING00000016816-9535.248ENSMLEG00000033967-8343.750Mandrillus_leucophaeus
ENSCING00000016816-9533.152ENSMLEG00000028830-8142.236Mandrillus_leucophaeus
ENSCING00000016816-9533.819ENSMLEG00000023226-5834.593Mandrillus_leucophaeus
ENSCING00000016816-8931.157ENSMLEG00000024919-5831.157Mandrillus_leucophaeus
ENSCING00000016816-5041.477ENSMAMG00000016889eif4bb5533.994Mastacembelus_armatus
ENSCING00000016816-7643.836ENSMZEG00005026975eif4bb5338.596Maylandia_zebra
ENSCING00000016816-7338.376ENSMAUG00000018343Eif4b6133.511Mesocricetus_auratus
ENSCING00000016816-6631.739ENSMICG00000035704-9131.507Microcebus_murinus
ENSCING00000016816-9534.286ENSMICG00000033915-9834.625Microcebus_murinus
ENSCING00000016816-9832.225ENSMICG00000033942-9231.989Microcebus_murinus
ENSCING00000016816-9532.812ENSMOCG00000018841-6432.987Microtus_ochrogaster
ENSCING00000016816-9735.279ENSMOCG00000017700-6035.215Microtus_ochrogaster
ENSCING00000016816-9234.066ENSMOCG00000006053-9435.342Microtus_ochrogaster
ENSCING00000016816-9535.185ENSMOCG00000015277-6135.958Microtus_ochrogaster
ENSCING00000016816-6238.393ENSMMOG00000004246eif4bb7133.503Mola_mola
ENSCING00000016816-6239.207ENSMALG00000021976eif4bb9141.860Monopterus_albus
ENSCING00000016816-9534.805MGP_CAROLIEiJ_G0020335Eif4b6135.567Mus_caroli
ENSCING00000016816-9534.805ENSMUSG00000058655Eif4b9335.309Mus_musculus
ENSCING00000016816-9534.805MGP_SPRETEiJ_G0021228Eif4b6135.567Mus_spretus
ENSCING00000016816-9534.625ENSMPUG00000006220EIF4B6135.052Mustela_putorius_furo
ENSCING00000016816-9534.536ENSMLUG00000013021EIF4B6135.128Myotis_lucifugus
ENSCING00000016816-9635.065ENSNGAG00000012353Eif4b6136.997Nannospalax_galili
ENSCING00000016816-9233.795ENSNBRG00000015331eif4bb6932.895Neolamprologus_brichardi
ENSCING00000016816-9534.456ENSNLEG00000017727EIF4B9535.156Nomascus_leucogenys
ENSCING00000016816-9335.802ENSNLEG00000027255-9040.252Nomascus_leucogenys
ENSCING00000016816-9731.322ENSNLEG00000035400-9431.195Nomascus_leucogenys
ENSCING00000016816-9533.766ENSOPRG00000008447EIF4B6134.794Ochotona_princeps
ENSCING00000016816-9330.127ENSODEG00000012941-6931.298Octodon_degus
ENSCING00000016816-9533.043ENSODEG00000011370-7941.096Octodon_degus
ENSCING00000016816-9234.140ENSONIG00000019380eif4bb6533.676Oreochromis_niloticus
ENSCING00000016816-9432.303ENSOANG00000009940-6434.637Ornithorhynchus_anatinus
ENSCING00000016816-9534.974ENSOCUG00000013484EIF4B5935.325Oryctolagus_cuniculus
ENSCING00000016816-6436.475ENSORLG00000016502eif4bb5636.290Oryzias_latipes
ENSCING00000016816-6436.475ENSORLG00015008020eif4bb6531.095Oryzias_latipes_hsok
ENSCING00000016816-6336.797ENSOMEG00000000454eif4bb6232.581Oryzias_melastigma
ENSCING00000016816-9535.325ENSOARG00000016759EIF4B6135.567Ovis_aries
ENSCING00000016816-9534.026ENSPPAG00000030546-9234.367Pan_paniscus
ENSCING00000016816-9732.065ENSPPAG00000038159-6232.402Pan_paniscus
ENSCING00000016816-7138.113ENSPPAG00000029383-5038.346Pan_paniscus
ENSCING00000016816-5639.698ENSPPAG00000029220-8137.915Pan_paniscus
ENSCING00000016816-9531.250ENSPPAG00000030041-5832.399Pan_paniscus
ENSCING00000016816-9435.694ENSPPAG00000043040-9337.322Pan_paniscus
ENSCING00000016816-9534.545ENSPPRG00000008730EIF4B6135.309Panthera_pardus
ENSCING00000016816-9534.545ENSPTIG00000014635EIF4B6135.309Panthera_tigris_altaica
ENSCING00000016816-7541.758ENSPTRG00000050351-9334.316Pan_troglodytes
ENSCING00000016816-7541.758ENSPTRG00000043454-9334.316Pan_troglodytes
ENSCING00000016816-8134.177ENSPTRG00000043521-9134.177Pan_troglodytes
ENSCING00000016816-9534.286ENSPTRG00000047145-6135.052Pan_troglodytes
ENSCING00000016816-8932.743ENSPTRG00000049274-6132.743Pan_troglodytes
ENSCING00000016816-9535.405ENSPTRG00000043800-9142.690Pan_troglodytes
ENSCING00000016816-9532.708ENSPTRG00000040264-8933.067Pan_troglodytes
ENSCING00000016816-9535.142ENSPANG00000005737-9435.309Papio_anubis
ENSCING00000016816-9534.545ENSPANG00000014458-6135.309Papio_anubis
ENSCING00000016816-9534.870ENSPANG00000029637-8839.333Papio_anubis
ENSCING00000016816-9534.358ENSPANG00000034874-9334.174Papio_anubis
ENSCING00000016816-8839.316ENSPKIG00000015805eif4ba6835.128Paramormyrops_kingsleyae
ENSCING00000016816-8032.792ENSPSIG00000017738EIF4B8134.049Pelodiscus_sinensis
ENSCING00000016816-9535.359ENSPMGG00000022372eif4bb8944.118Periophthalmus_magnuspinnatus
ENSCING00000016816-9434.383ENSPEMG00000016399Eif4b6037.197Peromyscus_maniculatus_bairdii
ENSCING00000016816-6940.854ENSPMAG00000005947-5343.284Petromyzon_marinus
ENSCING00000016816-9438.393ENSPMAG00000005484EIF4B6331.646Petromyzon_marinus
ENSCING00000016816-9439.044ENSPCIG00000011212EIF4B6138.800Phascolarctos_cinereus
ENSCING00000016816-6238.938ENSPFOG00000002142eif4bb6134.085Poecilia_formosa
ENSCING00000016816-6238.938ENSPLAG00000018434eif4bb6134.085Poecilia_latipinna
ENSCING00000016816-6238.938ENSPMEG00000003502eif4bb5439.844Poecilia_mexicana
ENSCING00000016816-8245.455ENSPREG00000001769eif4bb6134.783Poecilia_reticulata
ENSCING00000016816-9534.286ENSPPYG00000025848EIF4B6135.052Pongo_abelii
ENSCING00000016816-8235.762ENSPCOG00000016096-5836.093Propithecus_coquereli
ENSCING00000016816-9534.286ENSPCOG00000007039-6135.052Propithecus_coquereli
ENSCING00000016816-9533.676ENSPVAG00000009362EIF4B6135.309Pteropus_vampyrus
ENSCING00000016816-9433.423ENSPNAG00000013294eif4bb6536.056Pygocentrus_nattereri
ENSCING00000016816-9532.468ENSPNAG00000006684eif4ba7033.081Pygocentrus_nattereri
ENSCING00000016816-9534.286ENSRNOG00000010103Eif4b6135.052Rattus_norvegicus
ENSCING00000016816-9431.063ENSRBIG00000032876-9531.452Rhinopithecus_bieti
ENSCING00000016816-8231.875ENSRBIG00000024635-9730.084Rhinopithecus_bieti
ENSCING00000016816-9531.953ENSRBIG00000038114-8432.378Rhinopithecus_bieti
ENSCING00000016816-9534.015ENSRBIG00000043823-6135.052Rhinopithecus_bieti
ENSCING00000016816-9330.978ENSRROG00000034314-8336.585Rhinopithecus_roxellana
ENSCING00000016816-9533.760ENSRROG00000033336-6134.872Rhinopithecus_roxellana
ENSCING00000016816-9830.256ENSRROG00000045254-6331.367Rhinopithecus_roxellana
ENSCING00000016816-9533.760ENSRROG00000028884-9439.111Rhinopithecus_roxellana
ENSCING00000016816-6236.842ENSRROG00000030278-9436.538Rhinopithecus_roxellana
ENSCING00000016816-9534.286ENSSBOG00000026444EIF4B6135.309Saimiri_boliviensis_boliviensis
ENSCING00000016816-9430.725ENSSBOG00000032333-6130.925Saimiri_boliviensis_boliviensis
ENSCING00000016816-9534.271ENSSHAG00000003682EIF4B6134.204Sarcophilus_harrisii
ENSCING00000016816-7444.615ENSSFOG00015016223EIF4B6633.586Scleropages_formosus
ENSCING00000016816-6237.727ENSSFOG00015018808EIF4B6234.037Scleropages_formosus
ENSCING00000016816-9437.179ENSSMAG00000007678eif4bb6132.080Scophthalmus_maximus
ENSCING00000016816-6539.331ENSSDUG00000022993eif4bb6132.763Seriola_dumerili
ENSCING00000016816-6539.331ENSSLDG00000010210eif4bb6132.688Seriola_lalandi_dorsalis
ENSCING00000016816-9531.061ENSSPUG00000017451EIF4B6032.908Sphenodon_punctatus
ENSCING00000016816-6440.756ENSSPAG00000003105eif4bb6133.666Stegastes_partitus
ENSCING00000016816-9535.854ENSSSCG00000032028-6135.309Sus_scrofa
ENSCING00000016816-7149.231ENSTGUG00000003829EIF4B7534.026Taeniopygia_guttata
ENSCING00000016816-9431.921ENSTNIG00000007192eif4bb5934.626Tetraodon_nigroviridis
ENSCING00000016816-9534.545ENSUMAG00000009372EIF4B6135.309Ursus_maritimus
ENSCING00000016816-9433.598ENSVPAG00000007999EIF4B6036.240Vicugna_pacos
ENSCING00000016816-9533.602ENSVVUG00000016220-5833.957Vulpes_vulpes
ENSCING00000016816-6935.656ENSVVUG00000000336-9135.391Vulpes_vulpes
ENSCING00000016816-9043.421ENSXETG00000001829eif4b6235.038Xenopus_tropicalis
ENSCING00000016816-6241.176ENSXCOG00000017714eif4bb6237.234Xiphophorus_couchianus
ENSCING00000016816-6239.823ENSXMAG00000018673eif4bb6434.351Xiphophorus_maculatus

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