EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000016920 (Gene tree)
Gene ID: 100182326
Gene Symbol: -
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4356 bases
Position: chrHT001239.1:3115-7470
Accession: 100182326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029000	2OG-FeII_Oxy	PF03171.20	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000029246	-	1173	XM_002130307	ENSCINP00000029000	341 (aa)	XP_002130343	F7B3V5

Gene Model

Click here to download ENSCING00000016920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000016920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000016920	-	80	35.484	ENSAPOG00000011678	si:dkey-10o6.2	90	35.484	Acanthochromis_polyacanthus
ENSCING00000016920	-	93	35.890	ENSACIG00000011675	-	98	35.890	Amphilophus_citrinellus
ENSCING00000016920	-	83	38.014	ENSACIG00000024115	si:dkey-10o6.2	89	38.014	Amphilophus_citrinellus
ENSCING00000016920	-	84	38.644	ENSAOCG00000013068	si:dkey-10o6.2	91	38.644	Amphiprion_ocellaris
ENSCING00000016920	-	83	38.699	ENSAPEG00000011246	si:dkey-10o6.2	90	38.699	Amphiprion_percula
ENSCING00000016920	-	94	37.920	ENSATEG00000021952	si:dkey-10o6.2	99	37.920	Anabas_testudineus
ENSCING00000016920	-	94	38.532	ENSATEG00000000030	si:dkey-10o6.2	99	38.532	Anabas_testudineus
ENSCING00000016920	-	94	38.532	ENSATEG00000021945	si:dkey-10o6.2	99	38.532	Anabas_testudineus
ENSCING00000016920	-	93	35.276	ENSACLG00000023011	si:dkey-10o6.2	98	35.276	Astatotilapia_calliptera
ENSCING00000016920	-	94	37.309	ENSAMXG00000021555	si:dkey-10o6.2	99	37.309	Astyanax_mexicanus
ENSCING00000016920	-	70	49.167	ENSCING00000011926	-	100	49.167	Ciona_intestinalis
ENSCING00000016920	-	92	47.134	ENSCING00000022311	-	97	47.134	Ciona_intestinalis
ENSCING00000016920	-	93	43.354	ENSCING00000012500	-	97	43.354	Ciona_intestinalis
ENSCING00000016920	-	86	41.356	ENSCING00000007255	-	89	41.356	Ciona_intestinalis
ENSCING00000016920	-	94	41.379	ENSCSAVG00000000201	-	95	44.595	Ciona_savignyi
ENSCING00000016920	-	53	41.667	ENSCSAVG00000004871	-	90	41.667	Ciona_savignyi
ENSCING00000016920	-	50	68.824	ENSCSAVG00000001775	-	100	68.824	Ciona_savignyi
ENSCING00000016920	-	95	49.847	ENSCSAVG00000004616	-	100	49.847	Ciona_savignyi
ENSCING00000016920	-	71	42.562	ENSCSAVG00000001337	-	99	42.562	Ciona_savignyi
ENSCING00000016920	-	94	37.037	ENSCSEG00000000927	si:dkey-10o6.2	99	37.037	Cynoglossus_semilaevis
ENSCING00000016920	-	84	36.644	ENSCSEG00000000918	si:dkey-10o6.2	89	36.644	Cynoglossus_semilaevis
ENSCING00000016920	-	94	38.532	ENSCVAG00000015074	si:dkey-10o6.2	99	38.532	Cyprinodon_variegatus
ENSCING00000016920	-	95	37.879	ENSDARG00000074628	si:dkey-10o6.2	88	37.879	Danio_rerio
ENSCING00000016920	-	99	30.199	FBgn0053099	CG33099	98	30.199	Drosophila_melanogaster
ENSCING00000016920	-	93	35.583	ENSELUG00000003488	si:dkey-10o6.2	98	35.583	Esox_lucius
ENSCING00000016920	-	94	36.728	ENSFHEG00000019035	si:dkey-10o6.2	99	36.728	Fundulus_heteroclitus
ENSCING00000016920	-	83	38.408	ENSGMOG00000018989	si:dkey-10o6.2	92	38.408	Gadus_morhua
ENSCING00000016920	-	93	38.700	ENSGAFG00000006137	si:dkey-10o6.2	98	38.700	Gambusia_affinis
ENSCING00000016920	-	94	35.821	ENSGACG00000006806	si:dkey-10o6.2	99	35.821	Gasterosteus_aculeatus
ENSCING00000016920	-	93	35.276	ENSHBUG00000008853	si:dkey-10o6.2	98	35.276	Haplochromis_burtoni
ENSCING00000016920	-	94	34.862	ENSHCOG00000017626	si:dkey-10o6.2	99	34.862	Hippocampus_comes
ENSCING00000016920	-	84	35.714	ENSHCOG00000017671	-	91	35.714	Hippocampus_comes
ENSCING00000016920	-	94	38.344	ENSIPUG00000018911	-	99	38.344	Ictalurus_punctatus
ENSCING00000016920	-	94	38.344	ENSIPUG00000018879	si:dkey-10o6.2	86	38.762	Ictalurus_punctatus
ENSCING00000016920	-	94	37.654	ENSKMAG00000006197	si:dkey-10o6.2	98	37.654	Kryptolebias_marmoratus
ENSCING00000016920	-	96	36.095	ENSLBEG00000003823	si:dkey-10o6.2	91	36.095	Labrus_bergylta
ENSCING00000016920	-	85	35.354	ENSLBEG00000003839	si:dkey-10o6.2	89	35.354	Labrus_bergylta
ENSCING00000016920	-	94	37.538	ENSMAMG00000023026	-	99	37.538	Mastacembelus_armatus
ENSCING00000016920	-	94	37.538	ENSMAMG00000023025	-	99	37.538	Mastacembelus_armatus
ENSCING00000016920	-	94	36.890	ENSMAMG00000023022	si:dkey-10o6.2	99	36.890	Mastacembelus_armatus
ENSCING00000016920	-	94	37.500	ENSMAMG00000023020	si:dkey-10o6.2	99	37.500	Mastacembelus_armatus
ENSCING00000016920	-	93	35.583	ENSMZEG00005012018	si:dkey-10o6.2	98	35.583	Maylandia_zebra
ENSCING00000016920	-	93	34.451	ENSMMOG00000020383	si:dkey-10o6.2	96	34.451	Mola_mola
ENSCING00000016920	-	94	36.391	ENSMALG00000011300	si:dkey-10o6.2	99	36.391	Monopterus_albus
ENSCING00000016920	-	93	34.049	ENSNBRG00000015840	si:dkey-10o6.2	98	34.049	Neolamprologus_brichardi
ENSCING00000016920	-	94	35.168	ENSONIG00000015572	si:dkey-10o6.2	98	35.276	Oreochromis_niloticus
ENSCING00000016920	-	83	36.552	ENSORLG00000001314	si:dkey-10o6.2	90	36.552	Oryzias_latipes
ENSCING00000016920	-	93	34.568	ENSORLG00020002660	si:dkey-10o6.2	98	34.568	Oryzias_latipes_hni
ENSCING00000016920	-	93	36.728	ENSOMEG00000003617	si:dkey-10o6.2	96	36.728	Oryzias_melastigma
ENSCING00000016920	-	93	37.188	ENSPKIG00000024109	-	97	37.188	Paramormyrops_kingsleyae
ENSCING00000016920	-	94	35.604	ENSPKIG00000004183	si:dkey-10o6.2	86	35.604	Paramormyrops_kingsleyae
ENSCING00000016920	-	94	35.826	ENSPKIG00000004206	si:dkey-10o6.2	80	35.826	Paramormyrops_kingsleyae
ENSCING00000016920	-	94	35.976	ENSPMGG00000021603	si:dkey-10o6.2	99	35.976	Periophthalmus_magnuspinnatus
ENSCING00000016920	-	94	36.923	ENSPFOG00000017244	si:dkey-10o6.2	97	36.923	Poecilia_formosa
ENSCING00000016920	-	93	37.152	ENSPLAG00000008037	si:dkey-10o6.2	99	37.152	Poecilia_latipinna
ENSCING00000016920	-	68	38.627	ENSPMEG00000020748	si:dkey-10o6.2	96	38.627	Poecilia_mexicana
ENSCING00000016920	-	93	36.533	ENSPREG00000005108	si:dkey-10o6.2	98	36.533	Poecilia_reticulata
ENSCING00000016920	-	93	35.276	ENSPNYG00000010698	si:dkey-10o6.2	98	35.276	Pundamilia_nyererei
ENSCING00000016920	-	75	36.047	ENSPNAG00000014485	-	76	36.047	Pygocentrus_nattereri
ENSCING00000016920	-	95	36.036	ENSPNAG00000014123	si:dkey-10o6.2	98	36.145	Pygocentrus_nattereri
ENSCING00000016920	-	83	37.024	ENSSFOG00015015345	si:dkey-10o6.2	91	37.024	Scleropages_formosus
ENSCING00000016920	-	94	37.309	ENSSMAG00000019016	si:dkey-10o6.2	99	37.309	Scophthalmus_maximus
ENSCING00000016920	-	94	36.086	ENSSDUG00000000943	si:dkey-10o6.2	99	36.086	Seriola_dumerili
ENSCING00000016920	-	94	35.780	ENSSLDG00000003462	si:dkey-10o6.2	99	35.780	Seriola_lalandi_dorsalis
ENSCING00000016920	-	84	38.095	ENSSPAG00000020962	si:dkey-10o6.2	91	38.095	Stegastes_partitus
ENSCING00000016920	-	94	35.385	ENSTRUG00000019532	si:dkey-10o6.2	99	35.385	Takifugu_rubripes
ENSCING00000016920	-	93	36.842	ENSXCOG00000000855	si:dkey-10o6.2	98	36.842	Xiphophorus_couchianus
ENSCING00000016920	-	93	37.152	ENSXMAG00000012432	si:dkey-10o6.2	98	37.152	Xiphophorus_maculatus