EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000017297 (Gene tree)
Gene ID
100178501
Gene Symbol
-
Alias
-
Full Name
zinc finger CCHC-type and RNA-binding motif-containing protein 1-like
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
4053 bases
Position
chrHT000156.1:22162-26214
Accession
100178501
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000005219RRM_1PF00076.224.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000005219-1146XM_002128045ENSCINP00000005219211 (aa)XP_002128081F6UF94
Gene Model
Click here to download ENSCING00000017297's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000017297's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000017297-9951.802ENSG00000139168ZCRB19953.153Homo_sapiens
ENSCING00000017297-9952.838ENSAPOG00000012709zcrb19952.838Acanthochromis_polyacanthus
ENSCING00000017297-6064.286ENSAMEG00000013837ZCRB19952.252Ailuropoda_melanoleuca
ENSCING00000017297-9953.333ENSACIG00000015990zcrb19953.982Amphilophus_citrinellus
ENSCING00000017297-9954.148ENSAOCG00000015798zcrb19954.148Amphiprion_ocellaris
ENSCING00000017297-9954.148ENSAPEG00000017955zcrb19954.148Amphiprion_percula
ENSCING00000017297-6166.406ENSATEG00000012544zcrb19947.964Anabas_testudineus
ENSCING00000017297-9952.252ENSAPLG00000004312ZCRB19952.252Anas_platyrhynchos
ENSCING00000017297-9951.584ENSACAG00000003172ZCRB19952.489Anolis_carolinensis
ENSCING00000017297-9950.893ENSANAG00000020058ZCRB19952.703Aotus_nancymaae
ENSCING00000017297-9953.778ENSACLG00000001060zcrb19954.222Astatotilapia_calliptera
ENSCING00000017297-9954.185ENSAMXG00000033790zcrb19956.388Astyanax_mexicanus
ENSCING00000017297-6064.286ENSBTAG00000019119ZCRB19952.252Bos_taurus
ENSCING00000017297-6063.492ENSBTAG00000018340-9950.901Bos_taurus
ENSCING00000017297-9950.893ENSCJAG00000017749ZCRB19363.309Callithrix_jacchus
ENSCING00000017297-6064.286ENSCAFG00000030751ZCRB19952.252Canis_familiaris
ENSCING00000017297-6064.286ENSCAFG00020010455ZCRB19952.252Canis_lupus_dingo
ENSCING00000017297-9945.495ENSCHIG00000012567-9947.297Capra_hircus
ENSCING00000017297-6064.286ENSCHIG00000010312-9952.252Capra_hircus
ENSCING00000017297-7940.556ENSTSYG00000025575-9844.444Carlito_syrichta
ENSCING00000017297-9951.339ENSTSYG00000010691-9952.703Carlito_syrichta
ENSCING00000017297-6053.543ENSTSYG00000026505-9853.237Carlito_syrichta
ENSCING00000017297-6440.741ENSCAPG00000011576-9843.704Cavia_aperea
ENSCING00000017297-9949.321ENSCPOG00000031127ZCRB19952.036Cavia_porcellus
ENSCING00000017297-6456.115ENSCCAG00000021693-8356.115Cebus_capucinus
ENSCING00000017297-6164.062ENSCCAG00000035450-8663.309Cebus_capucinus
ENSCING00000017297-6164.062ENSCCAG00000032546-9155.376Cebus_capucinus
ENSCING00000017297-9950.893ENSCATG00000028610ZCRB19952.703Cercocebus_atys
ENSCING00000017297-9947.964ENSCLAG00000002653ZCRB19950.679Chinchilla_lanigera
ENSCING00000017297-9951.339ENSCSAG00000007086ZCRB19952.703Chlorocebus_sabaeus
ENSCING00000017297-6051.587ENSCHOG00000004490ZCRB19944.144Choloepus_hoffmanni
ENSCING00000017297-6065.079ENSCPBG00000015507ZCRB18255.435Chrysemys_picta_bellii
ENSCING00000017297-8573.184ENSCSAVG00000010693-10073.184Ciona_savignyi
ENSCING00000017297-9950.893ENSCANG00000042161ZCRB19063.309Colobus_angolensis_palliatus
ENSCING00000017297-9950.893ENSCGRG00001023392Zcrb19953.153Cricetulus_griseus_chok1gshd
ENSCING00000017297-9950.893ENSCGRG00000004778Zcrb19953.153Cricetulus_griseus_crigri
ENSCING00000017297-9950.667ENSCSEG00000010498zcrb19951.770Cynoglossus_semilaevis
ENSCING00000017297-9953.097ENSCVAG00000001057zcrb19953.947Cyprinodon_variegatus
ENSCING00000017297-9951.101ENSDARG00000045691zcrb19951.101Danio_rerio
ENSCING00000017297-9949.767ENSDNOG00000048722-9951.351Dasypus_novemcinctus
ENSCING00000017297-6162.016ENSDNOG00000049476-8960.140Dasypus_novemcinctus
ENSCING00000017297-5749.167ENSDORG00000026623-9942.130Dipodomys_ordii
ENSCING00000017297-9948.661ENSETEG00000019302ZCRB19950.000Echinops_telfairi
ENSCING00000017297-9948.000ENSEBUG00000010289zcrb19951.111Eptatretus_burgeri
ENSCING00000017297-9951.339ENSEASG00005023491ZCRB19252.915Equus_asinus_asinus
ENSCING00000017297-9949.554ENSECAG00000012174ZCRB19952.915Equus_caballus
ENSCING00000017297-9947.465ENSEEUG00000000397ZCRB19949.327Erinaceus_europaeus
ENSCING00000017297-9951.304ENSELUG00000020877zcrb19953.043Esox_lucius
ENSCING00000017297-6064.286ENSFCAG00000014760-9952.252Felis_catus
ENSCING00000017297-5255.963ENSFCAG00000035062-8348.921Felis_catus
ENSCING00000017297-9950.450ENSFALG00000010262ZCRB19951.802Ficedula_albicollis
ENSCING00000017297-9944.186ENSFDAG00000004074-9947.442Fukomys_damarensis
ENSCING00000017297-9942.453ENSFDAG00000003663-9942.453Fukomys_damarensis
ENSCING00000017297-9948.869ENSFDAG00000013019-9951.584Fukomys_damarensis
ENSCING00000017297-9952.655ENSFHEG00000007426zcrb19953.097Fundulus_heteroclitus
ENSCING00000017297-9948.230ENSGMOG00000018788zcrb19951.489Gadus_morhua
ENSCING00000017297-9950.901ENSGALG00000009544ZCRB19952.252Gallus_gallus
ENSCING00000017297-9951.754ENSGAFG00000017414zcrb19953.097Gambusia_affinis
ENSCING00000017297-6166.406ENSGACG00000018860zcrb19953.509Gasterosteus_aculeatus
ENSCING00000017297-9950.446ENSGAGG00000008782ZCRB19950.450Gopherus_agassizii
ENSCING00000017297-9938.288ENSGGOG00000043362-9940.090Gorilla_gorilla
ENSCING00000017297-9951.351ENSGGOG00000015647ZCRB19063.309Gorilla_gorilla
ENSCING00000017297-9953.778ENSHBUG00000006367zcrb19954.222Haplochromis_burtoni
ENSCING00000017297-9941.935ENSHGLG00000008186-9943.946Heterocephalus_glaber_female
ENSCING00000017297-9949.537ENSHGLG00000006280-9949.537Heterocephalus_glaber_female
ENSCING00000017297-9949.321ENSHGLG00000001325-9952.036Heterocephalus_glaber_female
ENSCING00000017297-9949.057ENSHGLG00000007867-9951.887Heterocephalus_glaber_female
ENSCING00000017297-9949.038ENSHGLG00000006122-9850.481Heterocephalus_glaber_female
ENSCING00000017297-9949.537ENSHGLG00100012202-9949.537Heterocephalus_glaber_male
ENSCING00000017297-9947.115ENSHGLG00100009473-9849.519Heterocephalus_glaber_male
ENSCING00000017297-6252.593ENSHGLG00100017475-10042.723Heterocephalus_glaber_male
ENSCING00000017297-8042.529ENSHGLG00100015818-9843.678Heterocephalus_glaber_male
ENSCING00000017297-9949.774ENSHGLG00100019510-9949.774Heterocephalus_glaber_male
ENSCING00000017297-8038.547ENSHGLG00100012132-9837.430Heterocephalus_glaber_male
ENSCING00000017297-9950.000ENSHCOG00000009098zcrb19952.632Hippocampus_comes
ENSCING00000017297-6162.500ENSIPUG00000017007zcrb19862.590Ictalurus_punctatus
ENSCING00000017297-6064.286ENSSTOG00000034477-9956.425Ictidomys_tridecemlineatus
ENSCING00000017297-6064.286ENSSTOG00000023833-9951.339Ictidomys_tridecemlineatus
ENSCING00000017297-8036.264ENSJJAG00000020804-9836.264Jaculus_jaculus
ENSCING00000017297-9951.339ENSJJAG00000021636-9952.232Jaculus_jaculus
ENSCING00000017297-5955.556ENSJJAG00000012365-9449.457Jaculus_jaculus
ENSCING00000017297-9945.622ENSJJAG00000023083-9947.926Jaculus_jaculus
ENSCING00000017297-9953.540ENSKMAG00000012448zcrb19953.982Kryptolebias_marmoratus
ENSCING00000017297-9949.784ENSLBEG00000004257zcrb19952.609Labrus_bergylta
ENSCING00000017297-9941.256ENSLACG00000007970ZCRB19941.256Latimeria_chalumnae
ENSCING00000017297-9951.982ENSLOCG00000001409zcrb19953.947Lepisosteus_oculatus
ENSCING00000017297-9950.446ENSLAFG00000008847ZCRB19952.703Loxodonta_africana
ENSCING00000017297-8644.898ENSMFAG00000039789ZCRB19946.907Macaca_fascicularis
ENSCING00000017297-9950.000ENSMFAG00000005490-9951.802Macaca_fascicularis
ENSCING00000017297-6149.612ENSMFAG00000030462-8549.286Macaca_fascicularis
ENSCING00000017297-9941.706ENSMMUG00000041598-9941.905Macaca_mulatta
ENSCING00000017297-8043.889ENSMMUG00000017319ZCRB19845.556Macaca_mulatta
ENSCING00000017297-6264.885ENSMNEG00000041890-9961.379Macaca_nemestrina
ENSCING00000017297-9942.180ENSMNEG00000032137-9944.076Macaca_nemestrina
ENSCING00000017297-9949.554ENSMNEG00000001077-9951.351Macaca_nemestrina
ENSCING00000017297-9941.706ENSMLEG00000034590-9943.602Mandrillus_leucophaeus
ENSCING00000017297-9950.893ENSMLEG00000042951ZCRB19952.703Mandrillus_leucophaeus
ENSCING00000017297-9950.661ENSMAMG00000009034zcrb19952.863Mastacembelus_armatus
ENSCING00000017297-9953.778ENSMZEG00005010889zcrb19954.222Maylandia_zebra
ENSCING00000017297-9950.901ENSMGAG00000009450ZCRB19951.528Meleagris_gallopavo
ENSCING00000017297-9952.252ENSMAUG00000009266Zcrb19953.604Mesocricetus_auratus
ENSCING00000017297-6064.286ENSMICG00000017422-9952.252Microcebus_murinus
ENSCING00000017297-6052.381ENSMICG00000026774-9943.243Microcebus_murinus
ENSCING00000017297-9951.339ENSMOCG00000011009Zcrb19952.679Microtus_ochrogaster
ENSCING00000017297-9947.982ENSMMOG00000002395zcrb19950.673Mola_mola
ENSCING00000017297-9140.686ENSMODG00000008893-9342.647Monodelphis_domestica
ENSCING00000017297-9951.351ENSMODG00000006493-9951.802Monodelphis_domestica
ENSCING00000017297-9952.444ENSMALG00000016907zcrb18454.222Monopterus_albus
ENSCING00000017297-9950.673MGP_CAROLIEiJ_G0020191Zcrb19952.941Mus_caroli
ENSCING00000017297-9950.673ENSMUSG00000022635Zcrb19952.941Mus_musculus
ENSCING00000017297-9952.036MGP_PahariEiJ_G0020195Zcrb19952.941Mus_pahari
ENSCING00000017297-9950.673MGP_SPRETEiJ_G0021087Zcrb19952.941Mus_spretus
ENSCING00000017297-9949.327ENSMPUG00000000901-9951.131Mustela_putorius_furo
ENSCING00000017297-6064.286ENSMPUG00000000327-9952.252Mustela_putorius_furo
ENSCING00000017297-9944.889ENSMPUG00000005129-9944.889Mustela_putorius_furo
ENSCING00000017297-6061.905ENSMLUG00000029416-9950.901Myotis_lucifugus
ENSCING00000017297-9950.446ENSMLUG00000026012-9952.703Myotis_lucifugus
ENSCING00000017297-6064.286ENSMLUG00000001332-9952.703Myotis_lucifugus
ENSCING00000017297-9951.339ENSNGAG00000020193Zcrb19952.232Nannospalax_galili
ENSCING00000017297-9954.667ENSNBRG00000001430zcrb19954.667Neolamprologus_brichardi
ENSCING00000017297-9950.893ENSNLEG00000017944ZCRB19952.703Nomascus_leucogenys
ENSCING00000017297-8243.011ENSMEUG00000003563ZCRB19945.161Notamacropus_eugenii
ENSCING00000017297-8645.876ENSOPRG00000011095ZCRB19946.907Ochotona_princeps
ENSCING00000017297-9949.321ENSODEG00000018576-9349.321Octodon_degus
ENSCING00000017297-5435.200ENSODEG00000000147-8240.000Octodon_degus
ENSCING00000017297-9949.321ENSODEG00000019971-9949.321Octodon_degus
ENSCING00000017297-9947.059ENSODEG00000007573-9949.321Octodon_degus
ENSCING00000017297-9949.554ENSODEG00000003051-9950.226Octodon_degus
ENSCING00000017297-9953.778ENSONIG00000016844zcrb19953.778Oreochromis_niloticus
ENSCING00000017297-6064.286ENSOANG00000009891ZCRB19950.450Ornithorhynchus_anatinus
ENSCING00000017297-9949.099ENSOCUG00000026539-9949.099Oryctolagus_cuniculus
ENSCING00000017297-9950.661ENSORLG00000013088zcrb19852.423Oryzias_latipes
ENSCING00000017297-9950.661ENSORLG00020019676zcrb19853.778Oryzias_latipes_hni
ENSCING00000017297-9952.423ENSORLG00015017998zcrb18352.423Oryzias_latipes_hsok
ENSCING00000017297-9951.770ENSOMEG00000011896zcrb19953.097Oryzias_melastigma
ENSCING00000017297-9950.901ENSOGAG00000026881-9951.802Otolemur_garnettii
ENSCING00000017297-9942.793ENSOGAG00000031462-9944.595Otolemur_garnettii
ENSCING00000017297-9949.554ENSOGAG00000013178-9951.339Otolemur_garnettii
ENSCING00000017297-6064.286ENSOARG00000000782-9951.802Ovis_aries
ENSCING00000017297-6064.286ENSOARG00000019797-9952.252Ovis_aries
ENSCING00000017297-6064.286ENSOARG00000004530-9952.252Ovis_aries
ENSCING00000017297-9951.802ENSPPAG00000030593ZCRB19063.309Pan_paniscus
ENSCING00000017297-9939.189ENSPPAG00000041848-9940.991Pan_paniscus
ENSCING00000017297-6064.286ENSPPRG00000003066-9952.252Panthera_pardus
ENSCING00000017297-6064.286ENSPTIG00000018037ZCRB19952.252Panthera_tigris_altaica
ENSCING00000017297-9937.838ENSPTRG00000045111-9939.640Pan_troglodytes
ENSCING00000017297-9951.802ENSPTRG00000004838ZCRB19063.309Pan_troglodytes
ENSCING00000017297-9950.893ENSPANG00000010274ZCRB19952.703Papio_anubis
ENSCING00000017297-9942.180ENSPANG00000031708-9943.128Papio_anubis
ENSCING00000017297-9952.889ENSPKIG00000006587zcrb19954.222Paramormyrops_kingsleyae
ENSCING00000017297-9951.339ENSPSIG00000014606ZCRB19951.351Pelodiscus_sinensis
ENSCING00000017297-9953.070ENSPMGG00000007605zcrb19954.386Periophthalmus_magnuspinnatus
ENSCING00000017297-9951.339ENSPEMG00000005293Zcrb19953.153Peromyscus_maniculatus_bairdii
ENSCING00000017297-8840.704ENSPMAG00000001258zcrb19940.704Petromyzon_marinus
ENSCING00000017297-9950.446ENSPCIG00000029300-9952.232Phascolarctos_cinereus
ENSCING00000017297-9951.770ENSPFOG00000015564zcrb19952.655Poecilia_formosa
ENSCING00000017297-9951.754ENSPLAG00000004685zcrb19952.655Poecilia_latipinna
ENSCING00000017297-9951.770ENSPMEG00000005524zcrb19952.655Poecilia_mexicana
ENSCING00000017297-9946.903ENSPREG00000011402zcrb19949.115Poecilia_reticulata
ENSCING00000017297-9950.893ENSPPYG00000004422ZCRB19952.703Pongo_abelii
ENSCING00000017297-9949.554ENSPCAG00000011749ZCRB19951.802Procavia_capensis
ENSCING00000017297-6064.286ENSPCOG00000022958ZCRB19952.703Propithecus_coquereli
ENSCING00000017297-8751.087ENSPVAG00000006651ZCRB19652.174Pteropus_vampyrus
ENSCING00000017297-9954.667ENSPNYG00000008344zcrb19954.667Pundamilia_nyererei
ENSCING00000017297-6065.873ENSPNAG00000023955zcrb19953.304Pygocentrus_nattereri
ENSCING00000017297-9951.339ENSRNOG00000004996Zcrb19952.703Rattus_norvegicus
ENSCING00000017297-9950.446ENSRBIG00000042559ZCRB19952.252Rhinopithecus_bieti
ENSCING00000017297-9950.893ENSRROG00000033546ZCRB19952.703Rhinopithecus_roxellana
ENSCING00000017297-9951.351ENSSBOG00000019523ZCRB19952.703Saimiri_boliviensis_boliviensis
ENSCING00000017297-6155.469ENSSBOG00000022234-8554.074Saimiri_boliviensis_boliviensis
ENSCING00000017297-9950.446ENSSHAG00000006273ZCRB19952.232Sarcophilus_harrisii
ENSCING00000017297-9951.556ENSSFOG00015005150zcrb19952.889Scleropages_formosus
ENSCING00000017297-9951.304ENSSMAG00000020477zcrb19952.863Scophthalmus_maximus
ENSCING00000017297-9950.218ENSSDUG00000007140zcrb19952.174Seriola_dumerili
ENSCING00000017297-9953.241ENSSLDG00000012143zcrb19954.378Seriola_lalandi_dorsalis
ENSCING00000017297-8042.308ENSSPUG00000009960ZCRB19842.222Sphenodon_punctatus
ENSCING00000017297-9952.838ENSSPAG00000013412zcrb19953.478Stegastes_partitus
ENSCING00000017297-9944.762ENSSSCG00000033618-9944.762Sus_scrofa
ENSCING00000017297-9951.339ENSSSCG00000034066-9952.232Sus_scrofa
ENSCING00000017297-9950.893ENSTGUG00000005829ZCRB19952.232Taeniopygia_guttata
ENSCING00000017297-9955.405ENSTRUG00000016764zcrb19956.306Takifugu_rubripes
ENSCING00000017297-9952.444ENSTNIG00000018504zcrb19952.444Tetraodon_nigroviridis
ENSCING00000017297-9942.411ENSTBEG00000008097ZCRB19942.291Tupaia_belangeri
ENSCING00000017297-9951.339ENSTTRG00000001378ZCRB19952.703Tursiops_truncatus
ENSCING00000017297-6064.286ENSUMAG00000024199ZCRB19952.252Ursus_maritimus
ENSCING00000017297-9951.339ENSVPAG00000012040ZCRB19952.232Vicugna_pacos
ENSCING00000017297-6064.286ENSVVUG00000016801ZCRB19952.252Vulpes_vulpes
ENSCING00000017297-9952.232ENSXETG00000006796zcrb19953.571Xenopus_tropicalis
ENSCING00000017297-6065.079ENSXCOG00000014895zcrb19962.329Xiphophorus_couchianus
ENSCING00000017297-9952.232ENSXMAG00000009359zcrb19954.018Xiphophorus_maculatus

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