EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000017363 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1368 bases
Position: chr10:3936489-3937856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029438	UPF0020	PF01170.18	7.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000029684	-	1368	-	ENSCINP00000029438	456 (aa)	-	F6X1E1

Gene Model

Click here to download ENSCING00000017363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000017363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000017363	-	98	45.987	ENSG00000066651	TRMT11	100	43.165	Homo_sapiens
ENSCING00000017363	-	98	46.304	ENSAPOG00000010741	trmt11	94	46.304	Acanthochromis_polyacanthus
ENSCING00000017363	-	98	46.187	ENSAMEG00000009509	TRMT11	95	46.187	Ailuropoda_melanoleuca
ENSCING00000017363	-	91	48.201	ENSACIG00000020205	trmt11	91	48.201	Amphilophus_citrinellus
ENSCING00000017363	-	98	46.563	ENSAOCG00000020121	trmt11	94	46.563	Amphiprion_ocellaris
ENSCING00000017363	-	98	46.341	ENSAPEG00000017412	trmt11	94	46.341	Amphiprion_percula
ENSCING00000017363	-	99	45.534	ENSATEG00000024365	trmt11	95	45.534	Anabas_testudineus
ENSCING00000017363	-	95	44.671	ENSAPLG00000002183	TRMT11	92	44.671	Anas_platyrhynchos
ENSCING00000017363	-	99	44.639	ENSACAG00000002072	TRMT11	93	44.639	Anolis_carolinensis
ENSCING00000017363	-	98	47.137	ENSANAG00000033565	TRMT11	95	47.137	Aotus_nancymaae
ENSCING00000017363	-	98	45.898	ENSACLG00000019724	trmt11	94	45.898	Astatotilapia_calliptera
ENSCING00000017363	-	99	45.316	ENSAMXG00000020379	trmt11	94	45.316	Astyanax_mexicanus
ENSCING00000017363	-	93	47.418	ENSBTAG00000001957	TRMT11	97	47.418	Bos_taurus
ENSCING00000017363	-	91	36.516	WBGene00022107	Y71F9AL.1	92	36.516	Caenorhabditis_elegans
ENSCING00000017363	-	98	46.916	ENSCJAG00000003686	TRMT11	97	47.642	Callithrix_jacchus
ENSCING00000017363	-	98	47.046	ENSCAFG00000001057	TRMT11	95	49.215	Canis_familiaris
ENSCING00000017363	-	98	47.137	ENSCAFG00020021931	TRMT11	95	47.137	Canis_lupus_dingo
ENSCING00000017363	-	99	46.507	ENSCHIG00000020274	TRMT11	96	46.507	Capra_hircus
ENSCING00000017363	-	83	48.438	ENSTSYG00000004430	TRMT11	88	48.438	Carlito_syrichta
ENSCING00000017363	-	85	49.227	ENSCAPG00000013532	TRMT11	88	49.227	Cavia_aperea
ENSCING00000017363	-	98	46.341	ENSCPOG00000009124	TRMT11	95	46.341	Cavia_porcellus
ENSCING00000017363	-	98	47.137	ENSCCAG00000018903	TRMT11	96	47.877	Cebus_capucinus
ENSCING00000017363	-	98	47.137	ENSCATG00000039002	TRMT11	95	47.137	Cercocebus_atys
ENSCING00000017363	-	98	46.667	ENSCLAG00000015746	TRMT11	95	46.667	Chinchilla_lanigera
ENSCING00000017363	-	98	47.137	ENSCSAG00000016335	TRMT11	95	47.137	Chlorocebus_sabaeus
ENSCING00000017363	-	98	45.916	ENSCPBG00000018528	TRMT11	92	45.916	Chrysemys_picta_bellii
ENSCING00000017363	-	98	46.799	ENSCANG00000036944	TRMT11	95	46.818	Colobus_angolensis_palliatus
ENSCING00000017363	-	98	45.815	ENSCGRG00001017153	Trmt11	95	45.815	Cricetulus_griseus_chok1gshd
ENSCING00000017363	-	95	46.119	ENSCGRG00000008525	Trmt11	93	46.119	Cricetulus_griseus_crigri
ENSCING00000017363	-	100	45.671	ENSCSEG00000009069	trmt11	94	45.671	Cynoglossus_semilaevis
ENSCING00000017363	-	98	46.341	ENSCVAG00000020822	trmt11	94	46.341	Cyprinodon_variegatus
ENSCING00000017363	-	99	45.175	ENSDARG00000040033	trmt11	98	44.703	Danio_rerio
ENSCING00000017363	-	99	46.957	ENSDNOG00000002737	TRMT11	97	46.957	Dasypus_novemcinctus
ENSCING00000017363	-	98	47.577	ENSDORG00000011192	Trmt11	95	47.577	Dipodomys_ordii
ENSCING00000017363	-	98	38.411	FBgn0037250	CG1074	89	38.411	Drosophila_melanogaster
ENSCING00000017363	-	67	44.398	ENSETEG00000007352	-	67	44.398	Echinops_telfairi
ENSCING00000017363	-	98	43.267	ENSEBUG00000014368	trmt11	91	43.267	Eptatretus_burgeri
ENSCING00000017363	-	99	47.174	ENSEASG00005009411	TRMT11	97	47.174	Equus_asinus_asinus
ENSCING00000017363	-	99	47.391	ENSECAG00000017788	TRMT11	98	47.674	Equus_caballus
ENSCING00000017363	-	56	53.933	ENSEEUG00000002249	-	53	53.933	Erinaceus_europaeus
ENSCING00000017363	-	98	45.374	ENSELUG00000005252	trmt11	86	45.374	Esox_lucius
ENSCING00000017363	-	98	47.137	ENSFCAG00000027670	TRMT11	95	47.137	Felis_catus
ENSCING00000017363	-	97	44.369	ENSFALG00000011486	TRMT11	95	44.789	Ficedula_albicollis
ENSCING00000017363	-	98	46.444	ENSFDAG00000006745	TRMT11	95	46.444	Fukomys_damarensis
ENSCING00000017363	-	98	43.080	ENSFHEG00000003504	trmt11	94	43.080	Fundulus_heteroclitus
ENSCING00000017363	-	99	46.491	ENSGMOG00000006618	trmt11	95	46.491	Gadus_morhua
ENSCING00000017363	-	87	48.267	ENSGALG00000014831	TRMT11	95	45.374	Gallus_gallus
ENSCING00000017363	-	98	45.011	ENSGAFG00000000144	trmt11	96	45.047	Gambusia_affinis
ENSCING00000017363	-	98	46.460	ENSGACG00000006060	trmt11	94	46.460	Gasterosteus_aculeatus
ENSCING00000017363	-	97	45.536	ENSGAGG00000005813	TRMT11	93	46.172	Gopherus_agassizii
ENSCING00000017363	-	98	45.770	ENSGGOG00000017016	TRMT11	95	45.770	Gorilla_gorilla
ENSCING00000017363	-	98	45.898	ENSHBUG00000012185	trmt11	94	45.898	Haplochromis_burtoni
ENSCING00000017363	-	98	45.898	ENSHGLG00000014007	TRMT11	95	45.898	Heterocephalus_glaber_female
ENSCING00000017363	-	98	45.898	ENSHGLG00100007509	TRMT11	95	45.898	Heterocephalus_glaber_male
ENSCING00000017363	-	88	45.320	ENSHCOG00000019331	trmt11	84	45.320	Hippocampus_comes
ENSCING00000017363	-	99	47.059	ENSIPUG00000017606	trmt11	94	47.059	Ictalurus_punctatus
ENSCING00000017363	-	98	47.241	ENSSTOG00000006671	TRMT11	95	47.241	Ictidomys_tridecemlineatus
ENSCING00000017363	-	99	46.957	ENSJJAG00000017244	-	97	46.957	Jaculus_jaculus
ENSCING00000017363	-	98	44.667	ENSKMAG00000021188	trmt11	94	44.667	Kryptolebias_marmoratus
ENSCING00000017363	-	98	44.150	ENSLBEG00000007644	trmt11	93	44.150	Labrus_bergylta
ENSCING00000017363	-	98	46.137	ENSLACG00000010156	TRMT11	95	46.137	Latimeria_chalumnae
ENSCING00000017363	-	98	45.916	ENSLOCG00000016519	trmt11	94	45.916	Lepisosteus_oculatus
ENSCING00000017363	-	98	46.341	ENSLAFG00000003414	TRMT11	95	46.341	Loxodonta_africana
ENSCING00000017363	-	98	47.137	ENSMFAG00000039916	TRMT11	95	47.137	Macaca_fascicularis
ENSCING00000017363	-	98	47.137	ENSMMUG00000004293	TRMT11	95	47.137	Macaca_mulatta
ENSCING00000017363	-	98	47.137	ENSMNEG00000040840	TRMT11	95	47.137	Macaca_nemestrina
ENSCING00000017363	-	98	47.137	ENSMLEG00000007788	TRMT11	95	47.137	Mandrillus_leucophaeus
ENSCING00000017363	-	98	45.815	ENSMAMG00000024066	trmt11	94	45.815	Mastacembelus_armatus
ENSCING00000017363	-	98	45.898	ENSMZEG00005001961	trmt11	94	45.898	Maylandia_zebra
ENSCING00000017363	-	95	44.931	ENSMGAG00000013262	TRMT11	92	44.931	Meleagris_gallopavo
ENSCING00000017363	-	99	46.204	ENSMAUG00000018053	Trmt11	97	46.204	Mesocricetus_auratus
ENSCING00000017363	-	98	47.241	ENSMICG00000029227	TRMT11	95	47.241	Microcebus_murinus
ENSCING00000017363	-	98	46.696	ENSMOCG00000008176	Trmt11	95	46.696	Microtus_ochrogaster
ENSCING00000017363	-	99	45.475	ENSMMOG00000007742	trmt11	94	45.475	Mola_mola
ENSCING00000017363	-	98	46.035	ENSMODG00000017679	TRMT11	95	46.035	Monodelphis_domestica
ENSCING00000017363	-	98	45.898	ENSMALG00000020514	trmt11	84	45.898	Monopterus_albus
ENSCING00000017363	-	99	46.421	MGP_CAROLIEiJ_G0015212	Trmt11	97	46.421	Mus_caroli
ENSCING00000017363	-	99	46.421	ENSMUSG00000019792	Trmt11	97	46.421	Mus_musculus
ENSCING00000017363	-	99	46.739	MGP_PahariEiJ_G0023834	Trmt11	97	46.739	Mus_pahari
ENSCING00000017363	-	99	43.573	MGP_SPRETEiJ_G0016021	Trmt11	94	47.328	Mus_spretus
ENSCING00000017363	-	98	47.357	ENSMPUG00000014547	TRMT11	74	47.357	Mustela_putorius_furo
ENSCING00000017363	-	95	46.380	ENSMLUG00000008157	TRMT11	96	46.380	Myotis_lucifugus
ENSCING00000017363	-	96	45.721	ENSNGAG00000023826	Trmt11	99	45.721	Nannospalax_galili
ENSCING00000017363	-	98	42.539	ENSNBRG00000010249	trmt11	94	42.539	Neolamprologus_brichardi
ENSCING00000017363	-	98	45.770	ENSNLEG00000014080	TRMT11	95	45.770	Nomascus_leucogenys
ENSCING00000017363	-	88	47.666	ENSMEUG00000008692	TRMT11	96	47.666	Notamacropus_eugenii
ENSCING00000017363	-	98	46.222	ENSODEG00000005552	TRMT11	95	46.222	Octodon_degus
ENSCING00000017363	-	98	45.333	ENSONIG00000007218	trmt11	94	45.333	Oreochromis_niloticus
ENSCING00000017363	-	99	45.952	ENSOANG00000002151	TRMT11	96	45.952	Ornithorhynchus_anatinus
ENSCING00000017363	-	98	47.137	ENSOCUG00000011783	TRMT11	95	47.137	Oryctolagus_cuniculus
ENSCING00000017363	-	99	44.150	ENSORLG00000005779	trmt11	95	44.150	Oryzias_latipes
ENSCING00000017363	-	99	43.929	ENSORLG00020019974	trmt11	95	43.929	Oryzias_latipes_hni
ENSCING00000017363	-	99	43.929	ENSORLG00015004293	trmt11	92	47.500	Oryzias_latipes_hsok
ENSCING00000017363	-	99	44.053	ENSOMEG00000016205	trmt11	94	44.053	Oryzias_melastigma
ENSCING00000017363	-	98	46.578	ENSOGAG00000008764	TRMT11	95	46.578	Otolemur_garnettii
ENSCING00000017363	-	99	46.507	ENSOARG00000007813	TRMT11	96	46.507	Ovis_aries
ENSCING00000017363	-	98	45.987	ENSPPAG00000029635	TRMT11	95	45.987	Pan_paniscus
ENSCING00000017363	-	98	47.137	ENSPPRG00000010751	TRMT11	95	47.137	Panthera_pardus
ENSCING00000017363	-	98	47.137	ENSPTIG00000014927	TRMT11	95	47.137	Panthera_tigris_altaica
ENSCING00000017363	-	98	45.770	ENSPTRG00000018577	TRMT11	95	45.770	Pan_troglodytes
ENSCING00000017363	-	98	47.137	ENSPANG00000022840	TRMT11	95	47.137	Papio_anubis
ENSCING00000017363	-	98	45.254	ENSPKIG00000012868	trmt11	94	45.254	Paramormyrops_kingsleyae
ENSCING00000017363	-	98	45.676	ENSPSIG00000011395	TRMT11	95	45.676	Pelodiscus_sinensis
ENSCING00000017363	-	99	46.204	ENSPEMG00000019414	-	97	46.204	Peromyscus_maniculatus_bairdii
ENSCING00000017363	-	88	47.174	ENSPMAG00000007834	trmt11	97	47.174	Petromyzon_marinus
ENSCING00000017363	-	88	47.901	ENSPCIG00000023970	TRMT11	93	47.901	Phascolarctos_cinereus
ENSCING00000017363	-	98	45.898	ENSPFOG00000018545	trmt11	94	45.898	Poecilia_formosa
ENSCING00000017363	-	98	45.898	ENSPLAG00000015864	trmt11	94	45.898	Poecilia_latipinna
ENSCING00000017363	-	98	45.898	ENSPMEG00000003760	trmt11	94	45.898	Poecilia_mexicana
ENSCING00000017363	-	98	45.676	ENSPREG00000012923	trmt11	94	45.676	Poecilia_reticulata
ENSCING00000017363	-	98	45.770	ENSPPYG00000016990	TRMT11	95	45.770	Pongo_abelii
ENSCING00000017363	-	98	47.020	ENSPCOG00000018890	TRMT11	95	47.020	Propithecus_coquereli
ENSCING00000017363	-	98	46.120	ENSPNYG00000011467	trmt11	94	46.120	Pundamilia_nyererei
ENSCING00000017363	-	99	45.969	ENSPNAG00000001816	trmt11	94	45.969	Pygocentrus_nattereri
ENSCING00000017363	-	99	45.987	ENSRNOG00000014240	Trmt11	96	45.987	Rattus_norvegicus
ENSCING00000017363	-	98	47.137	ENSRBIG00000029483	TRMT11	95	47.137	Rhinopithecus_bieti
ENSCING00000017363	-	98	47.137	ENSRROG00000041258	TRMT11	95	47.137	Rhinopithecus_roxellana
ENSCING00000017363	-	98	46.916	ENSSBOG00000026579	TRMT11	95	46.916	Saimiri_boliviensis_boliviensis
ENSCING00000017363	-	88	48.276	ENSSHAG00000016956	TRMT11	96	48.974	Sarcophilus_harrisii
ENSCING00000017363	-	99	43.956	ENSSFOG00015009471	trmt11	94	43.956	Scleropages_formosus
ENSCING00000017363	-	99	46.171	ENSSMAG00000006405	trmt11	95	46.171	Scophthalmus_maximus
ENSCING00000017363	-	98	44.000	ENSSDUG00000012463	trmt11	86	44.000	Seriola_dumerili
ENSCING00000017363	-	98	44.222	ENSSLDG00000014435	trmt11	94	44.222	Seriola_lalandi_dorsalis
ENSCING00000017363	-	98	45.233	ENSSPUG00000003588	TRMT11	95	45.233	Sphenodon_punctatus
ENSCING00000017363	-	98	46.593	ENSSPAG00000021676	trmt11	97	44.560	Stegastes_partitus
ENSCING00000017363	-	92	47.393	ENSSSCG00000004220	TRMT11	82	47.393	Sus_scrofa
ENSCING00000017363	-	97	45.291	ENSTGUG00000011774	TRMT11	95	45.575	Taeniopygia_guttata
ENSCING00000017363	-	98	46.222	ENSTRUG00000004275	trmt11	94	46.222	Takifugu_rubripes
ENSCING00000017363	-	98	46.222	ENSTNIG00000019098	trmt11	94	46.222	Tetraodon_nigroviridis
ENSCING00000017363	-	88	46.552	ENSTTRG00000015658	TRMT11	86	46.552	Tursiops_truncatus
ENSCING00000017363	-	84	47.287	ENSUAMG00000008507	TRMT11	90	47.287	Ursus_americanus
ENSCING00000017363	-	98	47.137	ENSUMAG00000001192	TRMT11	95	47.137	Ursus_maritimus
ENSCING00000017363	-	88	48.030	ENSVPAG00000010506	TRMT11	96	48.030	Vicugna_pacos
ENSCING00000017363	-	98	47.137	ENSVVUG00000000810	TRMT11	98	46.911	Vulpes_vulpes
ENSCING00000017363	-	98	47.241	ENSXETG00000011700	trmt11	91	47.241	Xenopus_tropicalis
ENSCING00000017363	-	87	44.500	ENSXCOG00000016281	trmt11	88	44.500	Xiphophorus_couchianus
ENSCING00000017363	-	98	44.789	ENSXMAG00000008688	trmt11	94	44.789	Xiphophorus_maculatus