EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000017557 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5006 bases
Position: chr11:1602896-1607901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029631	PAZ	PF02170.22	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000029877	-	1234	-	ENSCINP00000029631	374 (aa)	-	F6ZYP8

Gene Model

Click here to download ENSCING00000017557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000017557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000017557	-	99	38.770	ENSG00000134627	PIWIL4	67	38.636	Homo_sapiens
ENSCING00000017557	-	99	35.340	ENSAMEG00000008922	-	55	35.340	Ailuropoda_melanoleuca
ENSCING00000017557	-	99	32.979	ENSAPLG00000014006	PIWIL2	50	32.979	Anas_platyrhynchos
ENSCING00000017557	-	99	37.701	ENSCPOG00000000070	PIWIL4	50	37.701	Cavia_porcellus
ENSCING00000017557	-	100	84.225	ENSCSAVG00000003205	-	52	83.422	Ciona_savignyi
ENSCING00000017557	-	99	41.689	ENSDARG00000041699	piwil1	83	38.421	Danio_rerio
ENSCING00000017557	-	57	33.333	ENSFALG00000010889	-	87	33.333	Ficedula_albicollis
ENSCING00000017557	-	99	38.992	ENSFDAG00000011345	PIWIL1	51	38.992	Fukomys_damarensis
ENSCING00000017557	-	99	34.392	ENSFDAG00000020222	-	54	34.392	Fukomys_damarensis
ENSCING00000017557	-	81	38.065	ENSGMOG00000007585	piwil2	53	38.065	Gadus_morhua
ENSCING00000017557	-	82	37.061	ENSGACG00000012851	piwil2	54	37.061	Gasterosteus_aculeatus
ENSCING00000017557	-	83	34.700	ENSGGOG00000008783	-	51	34.700	Gorilla_gorilla
ENSCING00000017557	-	100	38.583	ENSHBUG00000011225	piwil2	51	35.092	Haplochromis_burtoni
ENSCING00000017557	-	100	36.483	ENSHCOG00000002903	piwil2	51	34.121	Hippocampus_comes
ENSCING00000017557	-	100	37.008	ENSKMAG00000009865	piwil2	51	34.908	Kryptolebias_marmoratus
ENSCING00000017557	-	99	35.233	ENSLACG00000001172	PIWIL4	65	35.038	Latimeria_chalumnae
ENSCING00000017557	-	99	39.257	MGP_CAROLIEiJ_G0027775	Piwil1	52	42.529	Mus_caroli
ENSCING00000017557	-	99	39.257	ENSMUSG00000029423	Piwil1	52	42.529	Mus_musculus
ENSCING00000017557	-	99	39.257	MGP_SPRETEiJ_G0028774	Piwil1	52	42.529	Mus_spretus
ENSCING00000017557	-	64	45.122	ENSPSIG00000011944	PIWIL1	51	45.122	Pelodiscus_sinensis
ENSCING00000017557	-	100	38.058	ENSPNYG00000003305	piwil2	50	34.828	Pundamilia_nyererei
ENSCING00000017557	-	83	34.906	ENSRBIG00000042426	PIWIL2	53	34.906	Rhinopithecus_bieti
ENSCING00000017557	-	99	34.225	ENSSHAG00000016064	-	70	34.225	Sarcophilus_harrisii