EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000017560 (Gene tree)
Gene ID: 100178426
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 366 bases
Position: chr11:2352151-2352516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029633	PC4	PF02229.16	5.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000029879	-	366	-	ENSCINP00000029633	122 (aa)	-	F6ZYN8

Gene Model

Click here to download ENSCING00000017560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000017560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000017560	-	51	47.619	ENSAMXG00000038560	-	99	41.221	Astyanax_mexicanus
ENSCING00000017560	-	100	41.538	ENSCPBG00000010898	-	100	41.538	Chrysemys_picta_bellii
ENSCING00000017560	-	100	71.654	ENSCSAVG00000009535	-	100	76.378	Ciona_savignyi
ENSCING00000017560	-	52	50.000	ENSCSEG00000009205	-	100	45.385	Cynoglossus_semilaevis
ENSCING00000017560	-	52	50.000	ENSCSEG00000011154	-	100	45.385	Cynoglossus_semilaevis
ENSCING00000017560	-	52	51.562	ENSCVAG00000021573	-	73	43.750	Cyprinodon_variegatus
ENSCING00000017560	-	50	46.774	ENSDORG00000026076	-	100	40.310	Dipodomys_ordii
ENSCING00000017560	-	56	42.647	FBgn0015299	Ssb-c31a	99	36.364	Drosophila_melanogaster
ENSCING00000017560	-	52	48.438	ENSELUG00000022688	sub1	100	42.105	Esox_lucius
ENSCING00000017560	-	57	45.000	ENSELUG00000005136	TCP4	100	38.971	Esox_lucius
ENSCING00000017560	-	52	48.438	ENSGMOG00000011659	-	100	40.000	Gadus_morhua
ENSCING00000017560	-	52	51.562	ENSGAFG00000016251	-	100	45.455	Gambusia_affinis
ENSCING00000017560	-	52	51.562	ENSKMAG00000013670	-	100	39.200	Kryptolebias_marmoratus
ENSCING00000017560	-	99	37.008	ENSMMOG00000008698	-	99	40.157	Mola_mola
ENSCING00000017560	-	54	44.776	ENSNGAG00000001935	-	83	37.500	Nannospalax_galili
ENSCING00000017560	-	69	40.909	ENSODEG00000004776	-	100	34.921	Octodon_degus
ENSCING00000017560	-	52	53.125	ENSONIG00000013958	-	100	45.113	Oreochromis_niloticus
ENSCING00000017560	-	51	55.556	ENSORLG00000017237	sub1	99	42.742	Oryzias_latipes
ENSCING00000017560	-	51	55.556	ENSORLG00020014865	sub1	99	42.742	Oryzias_latipes_hni
ENSCING00000017560	-	51	55.556	ENSORLG00015005820	sub1	99	42.742	Oryzias_latipes_hsok
ENSCING00000017560	-	51	53.968	ENSOMEG00000003351	-	99	45.238	Oryzias_melastigma
ENSCING00000017560	-	51	53.968	ENSPMGG00000017654	-	99	41.270	Periophthalmus_magnuspinnatus
ENSCING00000017560	-	52	51.562	ENSPFOG00000017101	-	100	45.455	Poecilia_formosa
ENSCING00000017560	-	52	51.562	ENSPLAG00000015088	-	100	45.455	Poecilia_latipinna
ENSCING00000017560	-	52	51.562	ENSPMEG00000023692	-	100	45.455	Poecilia_mexicana
ENSCING00000017560	-	52	51.562	ENSPREG00000011918	-	100	45.455	Poecilia_reticulata
ENSCING00000017560	-	52	53.125	ENSXCOG00000009356	-	100	46.212	Xiphophorus_couchianus
ENSCING00000017560	-	52	53.125	ENSXMAG00000013353	-	100	46.212	Xiphophorus_maculatus