EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000017577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2930 bases
Position: chrHT001066.1:66181-69110
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029649	Methyltr_RsmB-F	PF01189.17	3.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000029895	-	806	-	ENSCINP00000029649	240 (aa)	-	F6ZY66

Gene Model

Click here to download ENSCING00000017577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000017577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000017577	-	98	44.958	ENSG00000241058	NSUN6	79	38.843	Homo_sapiens
ENSCING00000017577	-	99	40.664	ENSAPOG00000016126	nsun6	52	40.664	Acanthochromis_polyacanthus
ENSCING00000017577	-	98	45.378	ENSAMEG00000012963	NSUN6	50	45.378	Ailuropoda_melanoleuca
ENSCING00000017577	-	99	40.000	ENSACIG00000016632	nsun6	51	40.000	Amphilophus_citrinellus
ENSCING00000017577	-	99	41.152	ENSAOCG00000020920	nsun6	52	41.152	Amphiprion_ocellaris
ENSCING00000017577	-	99	40.741	ENSAPEG00000015212	nsun6	50	40.741	Amphiprion_percula
ENSCING00000017577	-	98	40.336	ENSATEG00000004585	nsun6	52	40.336	Anabas_testudineus
ENSCING00000017577	-	99	44.813	ENSAPLG00000013473	NSUN6	51	44.813	Anas_platyrhynchos
ENSCING00000017577	-	99	43.983	ENSACAG00000005626	NSUN6	52	43.983	Anolis_carolinensis
ENSCING00000017577	-	98	44.215	ENSANAG00000027899	NSUN6	58	44.215	Aotus_nancymaae
ENSCING00000017577	-	99	40.741	ENSACLG00000000803	nsun6	52	40.741	Astatotilapia_calliptera
ENSCING00000017577	-	99	41.494	ENSAMXG00000010451	nsun6	51	42.739	Astyanax_mexicanus
ENSCING00000017577	-	98	46.639	ENSBTAG00000022003	NSUN6	57	46.639	Bos_taurus
ENSCING00000017577	-	99	43.265	ENSCJAG00000008427	NSUN6	51	43.265	Callithrix_jacchus
ENSCING00000017577	-	98	45.455	ENSCAFG00000004422	NSUN6	50	45.455	Canis_familiaris
ENSCING00000017577	-	98	45.455	ENSCAFG00020012116	NSUN6	50	45.455	Canis_lupus_dingo
ENSCING00000017577	-	98	47.059	ENSCHIG00000012618	NSUN6	50	47.059	Capra_hircus
ENSCING00000017577	-	98	43.802	ENSTSYG00000010744	NSUN6	50	43.802	Carlito_syrichta
ENSCING00000017577	-	98	41.772	ENSCPOG00000022824	-	50	41.772	Cavia_porcellus
ENSCING00000017577	-	98	44.215	ENSCCAG00000036696	NSUN6	50	44.215	Cebus_capucinus
ENSCING00000017577	-	98	45.378	ENSCATG00000038294	NSUN6	54	45.378	Cercocebus_atys
ENSCING00000017577	-	99	45.306	ENSCLAG00000008092	NSUN6	50	45.306	Chinchilla_lanigera
ENSCING00000017577	-	98	45.798	ENSCSAG00000012571	NSUN6	50	45.798	Chlorocebus_sabaeus
ENSCING00000017577	-	99	46.721	ENSCPBG00000015063	NSUN6	58	46.721	Chrysemys_picta_bellii
ENSCING00000017577	-	98	45.378	ENSCANG00000033916	NSUN6	50	45.378	Colobus_angolensis_palliatus
ENSCING00000017577	-	100	44.939	ENSCGRG00001023166	Nsun6	50	44.939	Cricetulus_griseus_chok1gshd
ENSCING00000017577	-	100	44.939	ENSCGRG00000016549	Nsun6	50	44.939	Cricetulus_griseus_crigri
ENSCING00000017577	-	99	40.833	ENSCSEG00000000514	nsun6	51	40.833	Cynoglossus_semilaevis
ENSCING00000017577	-	99	42.975	ENSCVAG00000006888	nsun6	52	42.975	Cyprinodon_variegatus
ENSCING00000017577	-	99	40.833	ENSDARG00000103478	nsun6	51	40.833	Danio_rerio
ENSCING00000017577	-	99	45.228	ENSDNOG00000014162	NSUN6	51	45.228	Dasypus_novemcinctus
ENSCING00000017577	-	96	37.603	FBgn0037200	CG11109	54	37.603	Drosophila_melanogaster
ENSCING00000017577	-	98	46.639	ENSEASG00005019939	NSUN6	50	46.639	Equus_asinus_asinus
ENSCING00000017577	-	98	46.639	ENSECAG00000009221	NSUN6	59	46.444	Equus_caballus
ENSCING00000017577	-	99	43.673	ENSFALG00000007398	NSUN6	51	43.673	Ficedula_albicollis
ENSCING00000017577	-	95	45.259	ENSFDAG00000021538	NSUN6	54	45.259	Fukomys_damarensis
ENSCING00000017577	-	99	40.984	ENSFHEG00000014522	nsun6	52	40.984	Fundulus_heteroclitus
ENSCING00000017577	-	99	41.494	ENSGMOG00000011167	nsun6	52	41.494	Gadus_morhua
ENSCING00000017577	-	99	46.250	ENSGALG00000008564	NSUN6	51	46.250	Gallus_gallus
ENSCING00000017577	-	99	41.079	ENSGAFG00000002703	nsun6	52	41.079	Gambusia_affinis
ENSCING00000017577	-	99	39.754	ENSGACG00000004059	nsun6	52	39.754	Gasterosteus_aculeatus
ENSCING00000017577	-	99	45.306	ENSGAGG00000011440	NSUN6	51	45.306	Gopherus_agassizii
ENSCING00000017577	-	98	44.958	ENSGGOG00000009321	NSUN6	64	44.770	Gorilla_gorilla
ENSCING00000017577	-	99	40.741	ENSHBUG00000009093	nsun6	52	40.741	Haplochromis_burtoni
ENSCING00000017577	-	99	41.736	ENSHCOG00000015758	nsun6	52	41.736	Hippocampus_comes
ENSCING00000017577	-	99	40.909	ENSIPUG00000006281	nsun6	51	40.909	Ictalurus_punctatus
ENSCING00000017577	-	91	44.889	ENSJJAG00000001860	Nsun6	53	44.889	Jaculus_jaculus
ENSCING00000017577	-	99	40.833	ENSKMAG00000013611	nsun6	52	40.833	Kryptolebias_marmoratus
ENSCING00000017577	-	99	37.759	ENSLBEG00000017133	nsun6	50	37.759	Labrus_bergylta
ENSCING00000017577	-	99	41.494	ENSLACG00000015374	NSUN6	51	41.494	Latimeria_chalumnae
ENSCING00000017577	-	99	44.856	ENSLOCG00000010862	nsun6	50	44.856	Lepisosteus_oculatus
ENSCING00000017577	-	98	45.868	ENSLAFG00000001485	NSUN6	50	45.868	Loxodonta_africana
ENSCING00000017577	-	98	45.378	ENSMFAG00000045602	NSUN6	50	45.378	Macaca_fascicularis
ENSCING00000017577	-	98	45.378	ENSMMUG00000007451	NSUN6	50	45.378	Macaca_mulatta
ENSCING00000017577	-	98	45.378	ENSMNEG00000045340	NSUN6	54	45.378	Macaca_nemestrina
ENSCING00000017577	-	98	45.378	ENSMLEG00000032035	NSUN6	50	45.378	Mandrillus_leucophaeus
ENSCING00000017577	-	99	42.324	ENSMAMG00000004915	nsun6	52	42.324	Mastacembelus_armatus
ENSCING00000017577	-	99	40.741	ENSMZEG00005000999	nsun6	52	40.741	Maylandia_zebra
ENSCING00000017577	-	99	46.058	ENSMGAG00000007427	NSUN6	50	46.058	Meleagris_gallopavo
ENSCING00000017577	-	100	46.091	ENSMAUG00000016025	Nsun6	50	46.091	Mesocricetus_auratus
ENSCING00000017577	-	98	45.798	ENSMICG00000029435	NSUN6	50	45.798	Microcebus_murinus
ENSCING00000017577	-	100	46.914	ENSMOCG00000009814	Nsun6	50	46.914	Microtus_ochrogaster
ENSCING00000017577	-	99	40.417	ENSMMOG00000004263	nsun6	51	40.417	Mola_mola
ENSCING00000017577	-	99	47.500	ENSMODG00000009471	NSUN6	51	47.500	Monodelphis_domestica
ENSCING00000017577	-	100	45.455	MGP_CAROLIEiJ_G0023196	Nsun6	54	45.726	Mus_caroli
ENSCING00000017577	-	100	45.455	ENSMUSG00000026707	Nsun6	54	45.726	Mus_musculus
ENSCING00000017577	-	98	44.628	ENSMPUG00000011900	NSUN6	50	44.628	Mustela_putorius_furo
ENSCING00000017577	-	99	45.643	ENSNGAG00000004582	Nsun6	50	45.643	Nannospalax_galili
ENSCING00000017577	-	98	44.958	ENSNLEG00000012680	NSUN6	64	44.770	Nomascus_leucogenys
ENSCING00000017577	-	98	45.570	ENSODEG00000010093	NSUN6	55	45.570	Octodon_degus
ENSCING00000017577	-	99	40.244	ENSONIG00000006038	nsun6	53	40.244	Oreochromis_niloticus
ENSCING00000017577	-	99	44.672	ENSOANG00000005705	NSUN6	50	44.672	Ornithorhynchus_anatinus
ENSCING00000017577	-	99	41.736	ENSORLG00000010870	nsun6	52	41.736	Oryzias_latipes
ENSCING00000017577	-	99	40.909	ENSORLG00020009913	nsun6	52	40.909	Oryzias_latipes_hni
ENSCING00000017577	-	99	40.909	ENSORLG00015009893	nsun6	52	40.909	Oryzias_latipes_hsok
ENSCING00000017577	-	99	39.184	ENSOMEG00000003613	nsun6	52	39.184	Oryzias_melastigma
ENSCING00000017577	-	98	44.167	ENSOGAG00000003925	NSUN6	50	44.167	Otolemur_garnettii
ENSCING00000017577	-	98	44.958	ENSPPAG00000042405	NSUN6	50	44.958	Pan_paniscus
ENSCING00000017577	-	98	45.378	ENSPPRG00000007015	NSUN6	50	45.378	Panthera_pardus
ENSCING00000017577	-	98	45.378	ENSPTIG00000010890	NSUN6	50	45.378	Panthera_tigris_altaica
ENSCING00000017577	-	98	44.538	ENSPANG00000023143	NSUN6	50	44.538	Papio_anubis
ENSCING00000017577	-	99	41.909	ENSPKIG00000011356	nsun6	50	41.909	Paramormyrops_kingsleyae
ENSCING00000017577	-	99	44.898	ENSPSIG00000014756	NSUN6	51	44.898	Pelodiscus_sinensis
ENSCING00000017577	-	100	45.679	ENSPEMG00000023389	Nsun6	50	45.679	Peromyscus_maniculatus_bairdii
ENSCING00000017577	-	99	40.909	ENSPMAG00000003159	nsun6	50	40.909	Petromyzon_marinus
ENSCING00000017577	-	99	43.952	ENSPCIG00000008953	NSUN6	53	43.775	Phascolarctos_cinereus
ENSCING00000017577	-	99	41.909	ENSPFOG00000016647	nsun6	52	41.909	Poecilia_formosa
ENSCING00000017577	-	99	41.909	ENSPLAG00000021785	nsun6	52	41.909	Poecilia_latipinna
ENSCING00000017577	-	99	41.909	ENSPMEG00000022256	nsun6	52	41.909	Poecilia_mexicana
ENSCING00000017577	-	98	45.378	ENSPPYG00000002131	NSUN6	52	45.378	Pongo_abelii
ENSCING00000017577	-	99	40.833	ENSPNYG00000000646	nsun6	52	40.833	Pundamilia_nyererei
ENSCING00000017577	-	99	41.322	ENSPNAG00000000807	nsun6	51	42.149	Pygocentrus_nattereri
ENSCING00000017577	-	100	45.122	ENSRNOG00000018520	Nsun6	50	45.122	Rattus_norvegicus
ENSCING00000017577	-	98	45.378	ENSRBIG00000033358	NSUN6	50	45.378	Rhinopithecus_bieti
ENSCING00000017577	-	98	45.378	ENSRROG00000033711	NSUN6	50	45.378	Rhinopithecus_roxellana
ENSCING00000017577	-	90	42.793	ENSSBOG00000036167	NSUN6	51	42.793	Saimiri_boliviensis_boliviensis
ENSCING00000017577	-	99	44.490	ENSSHAG00000008315	NSUN6	51	44.490	Sarcophilus_harrisii
ENSCING00000017577	-	99	40.574	ENSSFOG00015001941	nsun6	50	42.857	Scleropages_formosus
ENSCING00000017577	-	99	40.083	ENSSMAG00000011608	nsun6	52	40.083	Scophthalmus_maximus
ENSCING00000017577	-	99	39.419	ENSSDUG00000007541	nsun6	52	39.419	Seriola_dumerili
ENSCING00000017577	-	99	39.419	ENSSLDG00000021347	nsun6	52	39.419	Seriola_lalandi_dorsalis
ENSCING00000017577	-	99	42.683	ENSSPUG00000014085	NSUN6	51	42.683	Sphenodon_punctatus
ENSCING00000017577	-	99	40.329	ENSSPAG00000012441	nsun6	51	40.329	Stegastes_partitus
ENSCING00000017577	-	98	46.218	ENSSSCG00000011041	NSUN6	58	46.218	Sus_scrofa
ENSCING00000017577	-	99	44.715	ENSTGUG00000001241	NSUN6	51	44.715	Taeniopygia_guttata
ENSCING00000017577	-	99	30.279	ENSTRUG00000008314	nsun6	50	30.279	Takifugu_rubripes
ENSCING00000017577	-	81	33.503	ENSTBEG00000010815	NSUN6	50	33.503	Tupaia_belangeri
ENSCING00000017577	-	98	45.267	ENSTTRG00000007423	NSUN6	50	45.267	Tursiops_truncatus
ENSCING00000017577	-	98	45.041	ENSUMAG00000013383	NSUN6	50	45.041	Ursus_maritimus
ENSCING00000017577	-	98	45.455	ENSVVUG00000003814	NSUN6	55	45.455	Vulpes_vulpes
ENSCING00000017577	-	99	45.228	ENSXETG00000022762	nsun6	51	45.228	Xenopus_tropicalis