EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000018030 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
12843 bases
Position
chr5:1222572-1235414
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000033725cwf21PF08312.121.5e-1011
ENSCINP00000033725RRM_1PF00076.223.2e-1411
ENSCINP00000033725SurpPF01805.201.5e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000031470-2589-ENSCINP00000033725863 (aa)-H2XVP1
Gene Model
Click here to download ENSCING00000018030's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018030's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000018030-9650.909ENSG00000163714U2SURP8351.650Homo_sapiens
ENSCING00000018030-9345.098ENSAPOG00000005569zgc:1630989345.444Acanthochromis_polyacanthus
ENSCING00000018030-9051.566ENSAPOG00000011345u2surp8750.573Acanthochromis_polyacanthus
ENSCING00000018030-9650.909ENSAMEG00000012757U2SURP8351.650Ailuropoda_melanoleuca
ENSCING00000018030-9050.178ENSACIG00000018537u2surp9349.944Amphilophus_citrinellus
ENSCING00000018030-9340.095ENSACIG00000011968zgc:1630989243.119Amphilophus_citrinellus
ENSCING00000018030-9051.313ENSAOCG00000003589u2surp9548.387Amphiprion_ocellaris
ENSCING00000018030-9345.098ENSAOCG00000008482zgc:1630989147.424Amphiprion_ocellaris
ENSCING00000018030-9051.432ENSAPEG00000016652u2surp8850.758Amphiprion_percula
ENSCING00000018030-9345.098ENSAPEG00000001348zgc:1630989147.424Amphiprion_percula
ENSCING00000018030-8851.463ENSATEG00000006321u2surp8950.629Anabas_testudineus
ENSCING00000018030-9244.090ENSATEG00000016576zgc:1630989544.774Anabas_testudineus
ENSCING00000018030-9750.451ENSAPLG00000002348U2SURP8951.131Anas_platyrhynchos
ENSCING00000018030-9052.785ENSACAG00000009512U2SURP8250.795Anolis_carolinensis
ENSCING00000018030-9650.909ENSANAG00000035774U2SURP8653.827Aotus_nancymaae
ENSCING00000018030-9445.276ENSACLG00000016647zgc:1630989046.026Astatotilapia_calliptera
ENSCING00000018030-9051.971ENSACLG00000027507u2surp8950.673Astatotilapia_calliptera
ENSCING00000018030-9151.306ENSAMXG00000006189u2surp9449.834Astyanax_mexicanus
ENSCING00000018030-9444.052ENSAMXG00000005081zgc:1630989343.697Astyanax_mexicanus
ENSCING00000018030-8033.846WBGene00015581C07H6.49530.215Caenorhabditis_elegans
ENSCING00000018030-9651.422ENSCJAG00000001639U2SURP9151.333Callithrix_jacchus
ENSCING00000018030-9651.023ENSCAFG00000007973U2SURP8351.877Canis_familiaris
ENSCING00000018030-9650.909ENSCAFG00020010497U2SURP9451.333Canis_lupus_dingo
ENSCING00000018030-9850.553ENSCHIG00000023892U2SURP8650.885Capra_hircus
ENSCING00000018030-9750.787ENSTSYG00000008889U2SURP8751.464Carlito_syrichta
ENSCING00000018030-8150.970ENSCAPG00000016009U2SURP8151.456Cavia_aperea
ENSCING00000018030-8151.687ENSCPOG00000011656U2SURP8151.957Cavia_porcellus
ENSCING00000018030-9053.459ENSCCAG00000032530U2SURP8752.297Cebus_capucinus
ENSCING00000018030-9650.965ENSCATG00000039024U2SURP8851.650Cercocebus_atys
ENSCING00000018030-8144.244ENSCLAG00000011055-9540.842Chinchilla_lanigera
ENSCING00000018030-9650.965ENSCLAG00000001331-8651.763Chinchilla_lanigera
ENSCING00000018030-9651.023ENSCSAG00000011321U2SURP8351.763Chlorocebus_sabaeus
ENSCING00000018030-6856.423ENSCHOG00000001300U2SURP5756.818Choloepus_hoffmanni
ENSCING00000018030-9749.721ENSCPBG00000008969U2SURP9650.943Chrysemys_picta_bellii
ENSCING00000018030-9377.053ENSCSAVG00000009039-9977.503Ciona_savignyi
ENSCING00000018030-9650.909ENSCANG00000032307U2SURP8851.763Colobus_angolensis_palliatus
ENSCING00000018030-9849.779ENSCGRG00001019402U2surp8651.650Cricetulus_griseus_chok1gshd
ENSCING00000018030-7855.443ENSCGRG00000014315U2surp9548.963Cricetulus_griseus_crigri
ENSCING00000018030-9344.111ENSCSEG00000020119zgc:1630989542.471Cynoglossus_semilaevis
ENSCING00000018030-9052.410ENSCSEG00000015150u2surp9450.790Cynoglossus_semilaevis
ENSCING00000018030-9053.269ENSCVAG00000002961u2surp8951.580Cyprinodon_variegatus
ENSCING00000018030-9344.807ENSCVAG00000012334zgc:1630989045.173Cyprinodon_variegatus
ENSCING00000018030-9051.361ENSDARG00000061490u2surp9850.680Danio_rerio
ENSCING00000018030-9446.698ENSDARG00000078911zgc:1630989147.356Danio_rerio
ENSCING00000018030-9650.795ENSDNOG00000006427U2SURP8351.877Dasypus_novemcinctus
ENSCING00000018030-9244.630FBgn0034572CG93469343.124Drosophila_melanogaster
ENSCING00000018030-7051.004ENSETEG00000000149U2SURP6051.324Echinops_telfairi
ENSCING00000018030-5371.739ENSEBUG00000003543u2surp7446.699Eptatretus_burgeri
ENSCING00000018030-9651.023ENSEASG00005000213U2SURP9151.276Equus_asinus_asinus
ENSCING00000018030-9651.023ENSECAG00000022460U2SURP9151.276Equus_caballus
ENSCING00000018030-8249.726ENSEEUG00000013553U2SURP6949.794Erinaceus_europaeus
ENSCING00000018030-8949.375ENSELUG00000017966zgc:1630989246.136Esox_lucius
ENSCING00000018030-9050.466ENSELUG00000002150u2surp8848.867Esox_lucius
ENSCING00000018030-9651.023ENSFCAG00000012186U2SURP8351.763Felis_catus
ENSCING00000018030-9749.777ENSFALG00000007070U2SURP8749.944Ficedula_albicollis
ENSCING00000018030-9650.965ENSFDAG00000013365U2SURP8651.763Fukomys_damarensis
ENSCING00000018030-9052.657ENSFHEG00000016966u2surp8950.615Fundulus_heteroclitus
ENSCING00000018030-9344.983ENSFHEG00000014263zgc:1630989344.983Fundulus_heteroclitus
ENSCING00000018030-9150.536ENSGMOG00000002641u2surp8451.257Gadus_morhua
ENSCING00000018030-7848.676ENSGMOG00000000935zgc:1630989148.447Gadus_morhua
ENSCING00000018030-9850.056ENSGALG00000002612U2SURP8350.615Gallus_gallus
ENSCING00000018030-9152.512ENSGAFG00000004001u2surp9750.561Gambusia_affinis
ENSCING00000018030-9150.990ENSGACG00000003763u2surp8451.234Gasterosteus_aculeatus
ENSCING00000018030-8844.258ENSGACG00000020709zgc:1630988742.957Gasterosteus_aculeatus
ENSCING00000018030-9549.943ENSGAGG00000010747U2SURP8951.093Gopherus_agassizii
ENSCING00000018030-9650.909ENSGGOG00000005563U2SURP8849.888Gorilla_gorilla
ENSCING00000018030-9445.276ENSHBUG00000022716zgc:1630989445.789Haplochromis_burtoni
ENSCING00000018030-7653.680ENSHBUG00000015530u2surp9353.015Haplochromis_burtoni
ENSCING00000018030-9650.965ENSHGLG00000017227-8651.763Heterocephalus_glaber_female
ENSCING00000018030-8442.694ENSHGLG00000018851-7643.000Heterocephalus_glaber_female
ENSCING00000018030-8442.694ENSHGLG00100001134-7642.875Heterocephalus_glaber_male
ENSCING00000018030-9650.965ENSHGLG00100005796-8651.763Heterocephalus_glaber_male
ENSCING00000018030-8442.567ENSHGLG00100001176-7642.750Heterocephalus_glaber_male
ENSCING00000018030-9151.016ENSHCOG00000011508u2surp8649.101Hippocampus_comes
ENSCING00000018030-9446.316ENSIPUG00000019652zgc:1630989346.108Ictalurus_punctatus
ENSCING00000018030-9152.096ENSIPUG00000007822u2surp8452.821Ictalurus_punctatus
ENSCING00000018030-9651.023ENSSTOG00000015997U2SURP8351.877Ictidomys_tridecemlineatus
ENSCING00000018030-9651.192ENSJJAG00000021595U2surp8651.877Jaculus_jaculus
ENSCING00000018030-9543.950ENSKMAG00000009727zgc:1630989044.844Kryptolebias_marmoratus
ENSCING00000018030-9051.077ENSKMAG00000012083u2surp9350.168Kryptolebias_marmoratus
ENSCING00000018030-7745.442ENSLBEG00000002498zgc:1630988745.797Labrus_bergylta
ENSCING00000018030-9848.886ENSLBEG00000026284u2surp9849.454Labrus_bergylta
ENSCING00000018030-8852.768ENSLACG00000012318U2SURP9051.839Latimeria_chalumnae
ENSCING00000018030-8552.010ENSLACG00000008434zgc:1630988552.885Latimeria_chalumnae
ENSCING00000018030-9152.607ENSLOCG00000007828u2surp8951.000Lepisosteus_oculatus
ENSCING00000018030-8646.248ENSLOCG00000013596zgc:1630988947.876Lepisosteus_oculatus
ENSCING00000018030-9650.794ENSLAFG00000002566U2SURP8351.532Loxodonta_africana
ENSCING00000018030-9650.965ENSMFAG00000031084U2SURP8851.763Macaca_fascicularis
ENSCING00000018030-9650.965ENSMMUG00000002775U2SURP8751.763Macaca_mulatta
ENSCING00000018030-9650.965ENSMNEG00000034553U2SURP8851.763Macaca_nemestrina
ENSCING00000018030-9650.965ENSMLEG00000021031U2SURP8851.763Mandrillus_leucophaeus
ENSCING00000018030-9050.782ENSMAMG00000003004u2surp8849.008Mastacembelus_armatus
ENSCING00000018030-9345.052ENSMAMG00000016977zgc:1630988547.532Mastacembelus_armatus
ENSCING00000018030-9151.843ENSMZEG00005021991u2surp8950.283Maylandia_zebra
ENSCING00000018030-9445.276ENSMZEG00005016805zgc:1630989046.026Maylandia_zebra
ENSCING00000018030-9650.567ENSMGAG00000006549U2SURP8951.192Meleagris_gallopavo
ENSCING00000018030-9651.023ENSMICG00000049294U2SURP8351.650Microcebus_murinus
ENSCING00000018030-9651.195ENSMOCG00000000631U2surp8651.650Microtus_ochrogaster
ENSCING00000018030-9440.353ENSMMOG00000016677zgc:1630988342.196Mola_mola
ENSCING00000018030-9150.418ENSMMOG00000004474u2surp9149.206Mola_mola
ENSCING00000018030-9849.341ENSMODG00000021242-7951.579Monodelphis_domestica
ENSCING00000018030-9948.706ENSMODG00000010847-8650.117Monodelphis_domestica
ENSCING00000018030-9151.976ENSMALG00000007458u2surp9450.810Monopterus_albus
ENSCING00000018030-9345.969ENSMALG00000015881zgc:1630989546.347Monopterus_albus
ENSCING00000018030-9645.742MGP_CAROLIEiJ_G0032530-8945.937Mus_caroli
ENSCING00000018030-9650.965ENSMUSG00000032407U2surp8651.763Mus_musculus
ENSCING00000018030-9651.308MGP_PahariEiJ_G0015398U2surp8651.763Mus_pahari
ENSCING00000018030-9651.364MGP_SPRETEiJ_G0033672U2surp8651.763Mus_spretus
ENSCING00000018030-9849.890ENSMPUG00000011855U2SURP8550.608Mustela_putorius_furo
ENSCING00000018030-9750.731ENSMLUG00000002920-8551.577Myotis_lucifugus
ENSCING00000018030-9052.892ENSMLUG00000014633-8451.069Myotis_lucifugus
ENSCING00000018030-9650.965ENSNGAG00000013707U2surp8651.763Nannospalax_galili
ENSCING00000018030-9345.018ENSNBRG00000021199zgc:1630989045.844Neolamprologus_brichardi
ENSCING00000018030-8450.324ENSNBRG00000017162u2surp9249.272Neolamprologus_brichardi
ENSCING00000018030-9650.965ENSNLEG00000004915U2SURP8851.650Nomascus_leucogenys
ENSCING00000018030-7451.603ENSMEUG00000000127U2SURP7049.932Notamacropus_eugenii
ENSCING00000018030-8343.276ENSOPRG00000011328U2SURP7543.276Ochotona_princeps
ENSCING00000018030-9650.965ENSODEG00000008767U2SURP8651.763Octodon_degus
ENSCING00000018030-9151.691ENSONIG00000005909u2surp8951.076Oreochromis_niloticus
ENSCING00000018030-9445.360ENSONIG00000005263zgc:1630989045.622Oreochromis_niloticus
ENSCING00000018030-9052.778ENSOANG00000003644U2SURP7853.341Ornithorhynchus_anatinus
ENSCING00000018030-9750.787ENSOCUG00000012121U2SURP8351.519Oryctolagus_cuniculus
ENSCING00000018030-9444.767ENSORLG00000007141zgc:1630989544.816Oryzias_latipes
ENSCING00000018030-9051.332ENSORLG00000010235u2surp8849.944Oryzias_latipes
ENSCING00000018030-9151.066ENSORLG00020011726u2surp9551.374Oryzias_latipes_hni
ENSCING00000018030-9445.116ENSORLG00020005525zgc:1630989545.046Oryzias_latipes_hni
ENSCING00000018030-9445.158ENSORLG00015010776zgc:1630989545.202Oryzias_latipes_hsok
ENSCING00000018030-9050.843ENSORLG00015011465u2surp8849.831Oryzias_latipes_hsok
ENSCING00000018030-9446.136ENSOMEG00000002172zgc:1630989545.665Oryzias_melastigma
ENSCING00000018030-9051.279ENSOMEG00000004962u2surp9851.309Oryzias_melastigma
ENSCING00000018030-9650.909ENSOGAG00000004335U2SURP8351.763Otolemur_garnettii
ENSCING00000018030-9151.891ENSOARG00000005871U2SURP8550.442Ovis_aries
ENSCING00000018030-9650.909ENSPPRG00000022258U2SURP8351.650Panthera_pardus
ENSCING00000018030-9650.795ENSPTIG00000001167U2SURP8351.650Panthera_tigris_altaica
ENSCING00000018030-9651.023ENSPTRG00000015489U2SURP9044.808Pan_troglodytes
ENSCING00000018030-9650.965ENSPANG00000000710U2SURP8653.949Papio_anubis
ENSCING00000018030-9052.000ENSPKIG00000021859u2surp8452.358Paramormyrops_kingsleyae
ENSCING00000018030-8948.864ENSPKIG00000017920zgc:1630989147.630Paramormyrops_kingsleyae
ENSCING00000018030-8951.946ENSPSIG00000016578U2SURP8950.861Pelodiscus_sinensis
ENSCING00000018030-8745.419ENSPMGG00000008623zgc:1630989856.140Periophthalmus_magnuspinnatus
ENSCING00000018030-9651.195ENSPEMG00000020825U2surp8651.536Peromyscus_maniculatus_bairdii
ENSCING00000018030-9649.310ENSPCIG00000004246U2SURP9448.991Phascolarctos_cinereus
ENSCING00000018030-9345.255ENSPFOG00000011956zgc:1630988547.247Poecilia_formosa
ENSCING00000018030-9052.518ENSPFOG00000014489u2surp8850.838Poecilia_formosa
ENSCING00000018030-9052.785ENSPLAG00000006816u2surp8851.071Poecilia_latipinna
ENSCING00000018030-9345.139ENSPLAG00000008250zgc:1630988547.119Poecilia_latipinna
ENSCING00000018030-9345.423ENSPMEG00000017413zgc:1630988547.179Poecilia_mexicana
ENSCING00000018030-9052.734ENSPMEG00000014599u2surp9051.439Poecilia_mexicana
ENSCING00000018030-9344.948ENSPREG00000023067zgc:1630989444.598Poecilia_reticulata
ENSCING00000018030-9850.277ENSPREG00000009325u2surp9353.005Poecilia_reticulata
ENSCING00000018030-9650.967ENSPPYG00000014178U2SURP8351.708Pongo_abelii
ENSCING00000018030-9050.363ENSPCAG00000015251U2SURP8051.338Procavia_capensis
ENSCING00000018030-9649.553ENSPCOG00000019599U2SURP8650.388Propithecus_coquereli
ENSCING00000018030-9847.682ENSPVAG00000016077U2SURP8548.451Pteropus_vampyrus
ENSCING00000018030-9445.392ENSPNYG00000016481zgc:1630989045.789Pundamilia_nyererei
ENSCING00000018030-9747.720ENSPNYG00000006246u2surp9348.280Pundamilia_nyererei
ENSCING00000018030-9447.580ENSPNAG00000023885zgc:1630989348.414Pygocentrus_nattereri
ENSCING00000018030-9450.399ENSPNAG00000001722u2surp9950.626Pygocentrus_nattereri
ENSCING00000018030-9650.965ENSRNOG00000008607U2surp8651.763Rattus_norvegicus
ENSCING00000018030-9650.114ENSRBIG00000041099U2SURP8350.853Rhinopithecus_bieti
ENSCING00000018030-9650.965ENSRROG00000043548U2SURP8851.763Rhinopithecus_roxellana
ENSCING00000018030-9650.909ENSSBOG00000027984U2SURP8351.650Saimiri_boliviensis_boliviensis
ENSCING00000018030-9650.909ENSSHAG00000014407U2SURP8351.419Sarcophilus_harrisii
ENSCING00000018030-9247.099ENSSFOG00015004962zgc:1630988948.939Scleropages_formosus
ENSCING00000018030-9153.606ENSSFOG00015010470u2surp8253.846Scleropages_formosus
ENSCING00000018030-9345.765ENSSMAG00000013442zgc:1630989046.061Scophthalmus_maximus
ENSCING00000018030-9049.881ENSSMAG00000012475u2surp8948.886Scophthalmus_maximus
ENSCING00000018030-9150.539ENSSDUG00000006136u2surp8949.944Seriola_dumerili
ENSCING00000018030-9444.903ENSSDUG00000009881zgc:1630988546.465Seriola_dumerili
ENSCING00000018030-9444.596ENSSLDG00000020364zgc:1630988847.606Seriola_lalandi_dorsalis
ENSCING00000018030-9051.737ENSSLDG00000022385u2surp8950.564Seriola_lalandi_dorsalis
ENSCING00000018030-8252.809ENSSARG00000013779U2SURP7352.861Sorex_araneus
ENSCING00000018030-8952.457ENSSPUG00000013871U2SURP8951.039Sphenodon_punctatus
ENSCING00000018030-9051.928ENSSPAG00000020432u2surp9350.792Stegastes_partitus
ENSCING00000018030-9344.728ENSSPAG00000000916zgc:1630989245.562Stegastes_partitus
ENSCING00000018030-9650.909ENSSSCG00000011684U2SURP9151.333Sus_scrofa
ENSCING00000018030-9650.396ENSTGUG00000008687U2SURP8950.566Taeniopygia_guttata
ENSCING00000018030-9151.138ENSTRUG00000017810u2surp8951.322Takifugu_rubripes
ENSCING00000018030-9052.273ENSTNIG00000012767u2surp9151.432Tetraodon_nigroviridis
ENSCING00000018030-8649.435ENSTBEG00000016313U2SURP7550.445Tupaia_belangeri
ENSCING00000018030-9650.797ENSTTRG00000017170U2SURP8351.481Tursiops_truncatus
ENSCING00000018030-9650.909ENSUAMG00000028259U2SURP9451.333Ursus_americanus
ENSCING00000018030-9650.795ENSVPAG00000004697U2SURP8451.650Vicugna_pacos
ENSCING00000018030-9849.890ENSVVUG00000021495U2SURP9450.324Vulpes_vulpes
ENSCING00000018030-9750.113ENSXETG00000022133u2surp8850.739Xenopus_tropicalis
ENSCING00000018030-9152.432ENSXCOG00000011427u2surp9851.002Xiphophorus_couchianus
ENSCING00000018030-7445.224ENSXCOG00000007025zgc:1630988644.812Xiphophorus_couchianus
ENSCING00000018030-9345.191ENSXMAG00000012662zgc:1630988547.247Xiphophorus_maculatus
ENSCING00000018030-9251.655ENSXMAG00000002608u2surp9650.394Xiphophorus_maculatus

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