EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018180 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1107 bases
Position: chr1:5349404-5350510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034569	RRF	PF01765.19	6.9e-29	1	1
ENSCINP00000033503	RRF	PF01765.19	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036185	-	756	-	ENSCINP00000033503	252 (aa)	-	H2XV19
ENSCINT00000033340	-	672	-	ENSCINP00000034569	224 (aa)	-	H2XY35

Gene Model

Click here to download ENSCING00000018180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018180	-	81	34.426	ENSG00000148187	MRRF	95	34.450	Homo_sapiens
ENSCING00000018180	-	81	30.769	ENSAPOG00000001958	mrrf	80	30.288	Acanthochromis_polyacanthus
ENSCING00000018180	-	81	35.519	ENSAMEG00000000756	MRRF	79	34.928	Ailuropoda_melanoleuca
ENSCING00000018180	-	81	30.220	ENSACIG00000005017	mrrf	70	30.220	Amphilophus_citrinellus
ENSCING00000018180	-	81	30.769	ENSAOCG00000006807	mrrf	80	30.288	Amphiprion_ocellaris
ENSCING00000018180	-	81	30.769	ENSAPEG00000007934	mrrf	80	30.288	Amphiprion_percula
ENSCING00000018180	-	63	30.818	ENSATEG00000019203	mrrf	64	32.000	Anabas_testudineus
ENSCING00000018180	-	99	31.416	ENSAPLG00000014749	MRRF	86	30.263	Anas_platyrhynchos
ENSCING00000018180	-	81	34.426	ENSANAG00000027637	-	78	34.450	Aotus_nancymaae
ENSCING00000018180	-	94	34.545	ENSANAG00000036027	-	76	35.000	Aotus_nancymaae
ENSCING00000018180	-	81	30.220	ENSACLG00000019898	mrrf	71	30.220	Astatotilapia_calliptera
ENSCING00000018180	-	81	30.055	ENSAMXG00000013693	mrrf	81	30.806	Astyanax_mexicanus
ENSCING00000018180	-	88	30.045	ENSBTAG00000018426	MRRF	70	32.735	Bos_taurus
ENSCING00000018180	-	81	34.973	ENSCJAG00000020104	MRRF	78	34.928	Callithrix_jacchus
ENSCING00000018180	-	81	36.066	ENSCAFG00000032643	MRRF	79	35.407	Canis_familiaris
ENSCING00000018180	-	81	36.066	ENSCAFG00020015179	MRRF	79	35.407	Canis_lupus_dingo
ENSCING00000018180	-	88	30.045	ENSCHIG00000026312	MRRF	83	32.735	Capra_hircus
ENSCING00000018180	-	81	33.880	ENSTSYG00000009925	-	79	33.971	Carlito_syrichta
ENSCING00000018180	-	93	30.476	ENSTSYG00000036200	-	82	30.693	Carlito_syrichta
ENSCING00000018180	-	55	30.081	ENSCAPG00000008928	MRRF	62	30.872	Cavia_aperea
ENSCING00000018180	-	81	34.426	ENSCPOG00000007351	MRRF	79	34.450	Cavia_porcellus
ENSCING00000018180	-	81	34.254	ENSCCAG00000021452	-	78	34.300	Cebus_capucinus
ENSCING00000018180	-	81	34.973	ENSCCAG00000035511	-	78	34.928	Cebus_capucinus
ENSCING00000018180	-	81	34.973	ENSCATG00000044253	MRRF	71	35.829	Cercocebus_atys
ENSCING00000018180	-	81	34.973	ENSCLAG00000013089	MRRF	79	34.928	Chinchilla_lanigera
ENSCING00000018180	-	81	35.519	ENSCSAG00000013379	MRRF	62	34.928	Chlorocebus_sabaeus
ENSCING00000018180	-	79	30.198	ENSCPBG00000009881	MRRF	75	32.178	Chrysemys_picta_bellii
ENSCING00000018180	-	81	34.426	ENSCANG00000030811	MRRF	71	35.294	Colobus_angolensis_palliatus
ENSCING00000018180	-	81	35.519	ENSCGRG00001014100	Mrrf	79	35.407	Cricetulus_griseus_chok1gshd
ENSCING00000018180	-	81	35.519	ENSCGRG00000013789	Mrrf	79	35.407	Cricetulus_griseus_crigri
ENSCING00000018180	-	81	31.319	ENSCVAG00000012428	mrrf	97	31.102	Cyprinodon_variegatus
ENSCING00000018180	-	81	34.426	ENSDNOG00000039795	MRRF	79	34.450	Dasypus_novemcinctus
ENSCING00000018180	-	81	34.973	ENSDORG00000015863	Mrrf	79	34.928	Dipodomys_ordii
ENSCING00000018180	-	80	34.066	ENSETEG00000009835	MRRF	80	33.971	Echinops_telfairi
ENSCING00000018180	-	81	34.973	ENSEASG00005021081	MRRF	62	34.450	Equus_asinus_asinus
ENSCING00000018180	-	81	35.519	ENSECAG00000025085	MRRF	62	34.928	Equus_caballus
ENSCING00000018180	-	81	30.769	ENSELUG00000005852	mrrf	80	31.250	Esox_lucius
ENSCING00000018180	-	81	36.066	ENSFCAG00000038648	MRRF	74	35.407	Felis_catus
ENSCING00000018180	-	81	35.519	ENSFDAG00000009671	MRRF	79	34.762	Fukomys_damarensis
ENSCING00000018180	-	81	32.418	ENSFHEG00000012439	mrrf	79	31.731	Fundulus_heteroclitus
ENSCING00000018180	-	99	31.250	ENSGALG00000001333	MRRF	80	31.401	Gallus_gallus
ENSCING00000018180	-	81	31.319	ENSGAFG00000007759	mrrf	97	30.588	Gambusia_affinis
ENSCING00000018180	-	81	30.220	ENSGACG00000017355	mrrf	71	30.220	Gasterosteus_aculeatus
ENSCING00000018180	-	81	31.148	ENSGAGG00000018315	MRRF	68	31.148	Gopherus_agassizii
ENSCING00000018180	-	81	33.880	ENSGGOG00000036258	MRRF	79	33.971	Gorilla_gorilla
ENSCING00000018180	-	99	32.889	ENSHGLG00000010828	MRRF	92	32.099	Heterocephalus_glaber_female
ENSCING00000018180	-	99	32.889	ENSHGLG00100005757	MRRF	92	32.099	Heterocephalus_glaber_male
ENSCING00000018180	-	81	30.769	ENSHCOG00000003122	mrrf	81	30.288	Hippocampus_comes
ENSCING00000018180	-	81	34.973	ENSSTOG00000012632	MRRF	79	34.450	Ictidomys_tridecemlineatus
ENSCING00000018180	-	88	30.493	ENSJJAG00000012872	Mrrf	83	33.036	Jaculus_jaculus
ENSCING00000018180	-	81	31.694	ENSKMAG00000010695	mrrf	80	31.905	Kryptolebias_marmoratus
ENSCING00000018180	-	81	31.319	ENSLBEG00000023948	mrrf	80	31.250	Labrus_bergylta
ENSCING00000018180	-	79	31.731	ENSLACG00000010290	MRRF	74	31.731	Latimeria_chalumnae
ENSCING00000018180	-	81	32.240	ENSLOCG00000003021	mrrf	70	32.240	Lepisosteus_oculatus
ENSCING00000018180	-	81	36.066	ENSLAFG00000012138	MRRF	79	35.407	Loxodonta_africana
ENSCING00000018180	-	81	34.426	ENSMFAG00000044303	MRRF	71	35.294	Macaca_fascicularis
ENSCING00000018180	-	81	34.426	ENSMMUG00000012882	MRRF	71	35.294	Macaca_mulatta
ENSCING00000018180	-	81	34.973	ENSMNEG00000041393	MRRF	71	35.829	Macaca_nemestrina
ENSCING00000018180	-	81	34.973	ENSMLEG00000041718	MRRF	71	35.829	Mandrillus_leucophaeus
ENSCING00000018180	-	81	30.769	ENSMAMG00000009215	mrrf	71	30.769	Mastacembelus_armatus
ENSCING00000018180	-	81	30.769	ENSMZEG00005017909	mrrf	80	30.288	Maylandia_zebra
ENSCING00000018180	-	88	31.156	ENSMGAG00000007925	MRRF	98	31.156	Meleagris_gallopavo
ENSCING00000018180	-	81	36.066	ENSMAUG00000003771	Mrrf	79	35.885	Mesocricetus_auratus
ENSCING00000018180	-	81	34.426	ENSMICG00000016168	MRRF	85	32.735	Microcebus_murinus
ENSCING00000018180	-	81	36.612	ENSMOCG00000018514	Mrrf	79	36.364	Microtus_ochrogaster
ENSCING00000018180	-	81	31.319	ENSMMOG00000021317	mrrf	81	30.493	Mola_mola
ENSCING00000018180	-	81	31.319	ENSMALG00000017787	mrrf	80	30.769	Monopterus_albus
ENSCING00000018180	-	81	36.612	MGP_CAROLIEiJ_G0023489	Mrrf	79	36.364	Mus_caroli
ENSCING00000018180	-	81	36.612	ENSMUSG00000026887	Mrrf	79	35.885	Mus_musculus
ENSCING00000018180	-	81	36.066	MGP_PahariEiJ_G0024946	Mrrf	79	35.885	Mus_pahari
ENSCING00000018180	-	81	35.519	MGP_SPRETEiJ_G0024406	Mrrf	79	35.407	Mus_spretus
ENSCING00000018180	-	81	35.519	ENSMPUG00000007190	MRRF	84	33.632	Mustela_putorius_furo
ENSCING00000018180	-	81	36.066	ENSMLUG00000004799	MRRF	79	35.407	Myotis_lucifugus
ENSCING00000018180	-	81	36.066	ENSNGAG00000020224	Mrrf	79	35.885	Nannospalax_galili
ENSCING00000018180	-	81	30.220	ENSNBRG00000021100	mrrf	71	30.220	Neolamprologus_brichardi
ENSCING00000018180	-	81	34.426	ENSNLEG00000030419	MRRF	71	35.829	Nomascus_leucogenys
ENSCING00000018180	-	63	38.621	ENSOPRG00000010395	MRRF	65	37.791	Ochotona_princeps
ENSCING00000018180	-	67	35.762	ENSODEG00000019840	-	75	35.593	Octodon_degus
ENSCING00000018180	-	81	34.973	ENSODEG00000002071	-	79	34.928	Octodon_degus
ENSCING00000018180	-	81	30.769	ENSONIG00000003726	mrrf	80	30.288	Oreochromis_niloticus
ENSCING00000018180	-	81	30.601	ENSOANG00000008199	MRRF	91	30.973	Ornithorhynchus_anatinus
ENSCING00000018180	-	81	33.696	ENSOCUG00000008530	MRRF	79	33.810	Oryctolagus_cuniculus
ENSCING00000018180	-	95	31.308	ENSORLG00000009966	mrrf	85	30.918	Oryzias_latipes
ENSCING00000018180	-	91	30.882	ENSORLG00020013435	mrrf	80	31.250	Oryzias_latipes_hni
ENSCING00000018180	-	91	30.392	ENSORLG00015001687	mrrf	80	30.769	Oryzias_latipes_hsok
ENSCING00000018180	-	91	30.392	ENSOMEG00000001486	mrrf	71	31.319	Oryzias_melastigma
ENSCING00000018180	-	88	30.045	ENSOGAG00000003046	MRRF	83	33.632	Otolemur_garnettii
ENSCING00000018180	-	88	30.045	ENSOARG00000014134	MRRF	83	32.735	Ovis_aries
ENSCING00000018180	-	81	34.426	ENSPPAG00000041496	MRRF	79	34.450	Pan_paniscus
ENSCING00000018180	-	81	36.066	ENSPPRG00000013309	MRRF	79	35.407	Panthera_pardus
ENSCING00000018180	-	81	36.066	ENSPTIG00000007271	MRRF	79	35.407	Panthera_tigris_altaica
ENSCING00000018180	-	81	34.426	ENSPTRG00000021324	MRRF	71	35.829	Pan_troglodytes
ENSCING00000018180	-	81	34.973	ENSPANG00000025844	MRRF	71	35.829	Papio_anubis
ENSCING00000018180	-	81	31.694	ENSPSIG00000013622	MRRF	69	31.694	Pelodiscus_sinensis
ENSCING00000018180	-	81	36.612	ENSPEMG00000012001	Mrrf	79	36.364	Peromyscus_maniculatus_bairdii
ENSCING00000018180	-	81	34.973	ENSPCIG00000025530	MRRF	95	31.890	Phascolarctos_cinereus
ENSCING00000018180	-	81	30.769	ENSPFOG00000019705	mrrf	80	30.288	Poecilia_formosa
ENSCING00000018180	-	81	30.769	ENSPLAG00000005592	mrrf	80	30.288	Poecilia_latipinna
ENSCING00000018180	-	81	30.769	ENSPMEG00000014013	mrrf	70	30.769	Poecilia_mexicana
ENSCING00000018180	-	81	31.319	ENSPREG00000009134	mrrf	80	30.769	Poecilia_reticulata
ENSCING00000018180	-	81	34.426	ENSPPYG00000019570	MRRF	84	33.032	Pongo_abelii
ENSCING00000018180	-	81	32.787	ENSPPYG00000020693	-	71	34.043	Pongo_abelii
ENSCING00000018180	-	70	37.107	ENSPCAG00000005641	MRRF	77	36.757	Procavia_capensis
ENSCING00000018180	-	81	31.492	ENSPCOG00000012906	-	74	31.868	Propithecus_coquereli
ENSCING00000018180	-	81	34.973	ENSPCOG00000026480	-	79	34.928	Propithecus_coquereli
ENSCING00000018180	-	81	36.066	ENSPVAG00000000864	MRRF	79	35.407	Pteropus_vampyrus
ENSCING00000018180	-	81	30.769	ENSPNAG00000017686	mrrf	72	30.769	Pygocentrus_nattereri
ENSCING00000018180	-	81	36.066	ENSRNOG00000025997	Mrrf	79	35.885	Rattus_norvegicus
ENSCING00000018180	-	81	34.973	ENSRBIG00000035112	MRRF	71	35.829	Rhinopithecus_bieti
ENSCING00000018180	-	81	34.973	ENSRROG00000028983	MRRF	71	35.829	Rhinopithecus_roxellana
ENSCING00000018180	-	81	34.973	ENSSBOG00000022727	MRRF	78	34.928	Saimiri_boliviensis_boliviensis
ENSCING00000018180	-	81	34.426	ENSSHAG00000012469	MRRF	79	33.971	Sarcophilus_harrisii
ENSCING00000018180	-	81	30.601	ENSSFOG00015001131	mrrf	78	30.622	Scleropages_formosus
ENSCING00000018180	-	81	31.522	ENSSMAG00000020126	mrrf	80	30.952	Scophthalmus_maximus
ENSCING00000018180	-	81	33.516	ENSSDUG00000016181	mrrf	80	32.692	Seriola_dumerili
ENSCING00000018180	-	81	33.516	ENSSLDG00000016309	mrrf	80	32.692	Seriola_lalandi_dorsalis
ENSCING00000018180	-	81	31.319	ENSSPAG00000005380	mrrf	81	31.250	Stegastes_partitus
ENSCING00000018180	-	81	36.612	ENSSSCG00000005532	MRRF	79	35.885	Sus_scrofa
ENSCING00000018180	-	88	33.500	ENSTBEG00000016569	MRRF	79	34.928	Tupaia_belangeri
ENSCING00000018180	-	88	34.000	ENSTTRG00000007123	MRRF	89	35.955	Tursiops_truncatus
ENSCING00000018180	-	81	35.519	ENSUMAG00000003435	MRRF	71	36.757	Ursus_maritimus
ENSCING00000018180	-	81	36.066	ENSVVUG00000009449	MRRF	61	35.407	Vulpes_vulpes
ENSCING00000018180	-	81	31.868	ENSXETG00000016327	mrrf	81	32.039	Xenopus_tropicalis
ENSCING00000018180	-	81	31.319	ENSXCOG00000005067	mrrf	70	31.319	Xiphophorus_couchianus
ENSCING00000018180	-	81	31.319	ENSXMAG00000023463	mrrf	97	30.588	Xiphophorus_maculatus