EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018222 (Gene tree)
Gene ID: 100186814
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2964 bases
Position: chr11:1949963-1952926
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032760	GCD14	PF08704.10	2e-92	1	1
ENSCINP00000032760	Methyltransf_31	PF13847.6	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036510	-	947	-	ENSCINP00000032760	303 (aa)	-	H2XSX6

Gene Model

Click here to download ENSCING00000018222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018222	-	100	51.148	ENSG00000166166	TRMT61A	100	51.148	Homo_sapiens
ENSCING00000018222	-	99	54.967	ENSAPOG00000004599	trmt61a	99	54.967	Acanthochromis_polyacanthus
ENSCING00000018222	-	100	51.148	ENSAMEG00000018154	TRMT61A	100	51.148	Ailuropoda_melanoleuca
ENSCING00000018222	-	99	54.485	ENSACIG00000023818	trmt61a	99	54.485	Amphilophus_citrinellus
ENSCING00000018222	-	99	54.305	ENSAOCG00000016986	trmt61a	99	54.305	Amphiprion_ocellaris
ENSCING00000018222	-	99	53.974	ENSAPEG00000003541	trmt61a	99	53.974	Amphiprion_percula
ENSCING00000018222	-	99	54.305	ENSATEG00000017286	trmt61a	99	54.305	Anabas_testudineus
ENSCING00000018222	-	99	53.571	ENSAPLG00000011344	TRMT61A	97	53.571	Anas_platyrhynchos
ENSCING00000018222	-	99	53.821	ENSACAG00000000860	TRMT61A	99	53.821	Anolis_carolinensis
ENSCING00000018222	-	100	51.148	ENSANAG00000020615	TRMT61A	100	51.148	Aotus_nancymaae
ENSCING00000018222	-	99	53.488	ENSACLG00000010779	trmt61a	99	53.488	Astatotilapia_calliptera
ENSCING00000018222	-	99	54.575	ENSAMXG00000037952	trmt61a	99	54.575	Astyanax_mexicanus
ENSCING00000018222	-	100	50.492	ENSBTAG00000031327	TRMT61A	100	50.492	Bos_taurus
ENSCING00000018222	-	99	42.122	WBGene00012192	W02A11.1	97	42.122	Caenorhabditis_elegans
ENSCING00000018222	-	100	51.148	ENSCJAG00000017117	TRMT61A	100	51.148	Callithrix_jacchus
ENSCING00000018222	-	100	50.820	ENSCAFG00000029557	TRMT61A	100	50.820	Canis_familiaris
ENSCING00000018222	-	100	50.820	ENSCAFG00020008720	TRMT61A	100	50.820	Canis_lupus_dingo
ENSCING00000018222	-	100	50.164	ENSCHIG00000021168	TRMT61A	100	50.164	Capra_hircus
ENSCING00000018222	-	100	50.820	ENSTSYG00000025609	TRMT61A	100	50.820	Carlito_syrichta
ENSCING00000018222	-	100	50.820	ENSCAPG00000003680	TRMT61A	100	50.820	Cavia_aperea
ENSCING00000018222	-	100	50.820	ENSCPOG00000033200	TRMT61A	100	50.820	Cavia_porcellus
ENSCING00000018222	-	100	51.148	ENSCCAG00000021969	TRMT61A	100	51.148	Cebus_capucinus
ENSCING00000018222	-	100	51.148	ENSCATG00000000028	TRMT61A	100	51.148	Cercocebus_atys
ENSCING00000018222	-	100	51.148	ENSCLAG00000007887	TRMT61A	100	51.148	Chinchilla_lanigera
ENSCING00000018222	-	100	50.820	ENSCSAG00000010059	TRMT61A	100	50.820	Chlorocebus_sabaeus
ENSCING00000018222	-	64	55.838	ENSCHOG00000010189	TRMT61A	99	55.838	Choloepus_hoffmanni
ENSCING00000018222	-	99	53.268	ENSCPBG00000020287	TRMT61A	99	53.268	Chrysemys_picta_bellii
ENSCING00000018222	-	89	80.741	ENSCSAVG00000006556	-	95	80.741	Ciona_savignyi
ENSCING00000018222	-	100	51.148	ENSCANG00000031243	TRMT61A	100	51.148	Colobus_angolensis_palliatus
ENSCING00000018222	-	100	51.803	ENSCGRG00001020952	Trmt61a	100	51.803	Cricetulus_griseus_chok1gshd
ENSCING00000018222	-	100	51.803	ENSCGRG00000005700	Trmt61a	100	51.803	Cricetulus_griseus_crigri
ENSCING00000018222	-	99	55.482	ENSCSEG00000013165	trmt61a	99	55.482	Cynoglossus_semilaevis
ENSCING00000018222	-	99	53.795	ENSCVAG00000018399	trmt61a	99	53.795	Cyprinodon_variegatus
ENSCING00000018222	-	99	56.536	ENSDARG00000008480	trmt61a	100	64.246	Danio_rerio
ENSCING00000018222	-	100	35.604	ENSDNOG00000035967	TRMT61A	100	36.223	Dasypus_novemcinctus
ENSCING00000018222	-	100	50.492	ENSDORG00000014905	Trmt61a	100	50.492	Dipodomys_ordii
ENSCING00000018222	-	100	48.571	FBgn0039407	CG14544	99	48.571	Drosophila_melanogaster
ENSCING00000018222	-	64	52.284	ENSETEG00000008670	TRMT61A	99	52.284	Echinops_telfairi
ENSCING00000018222	-	64	47.692	ENSEBUG00000005170	-	54	47.692	Eptatretus_burgeri
ENSCING00000018222	-	100	50.164	ENSEASG00005004127	TRMT61A	100	50.164	Equus_asinus_asinus
ENSCING00000018222	-	100	50.164	ENSECAG00000012599	TRMT61A	100	50.164	Equus_caballus
ENSCING00000018222	-	99	54.605	ENSELUG00000012611	trmt61a	99	54.605	Esox_lucius
ENSCING00000018222	-	100	50.164	ENSFCAG00000030816	TRMT61A	100	50.164	Felis_catus
ENSCING00000018222	-	99	52.922	ENSFALG00000002855	TRMT61A	99	52.922	Ficedula_albicollis
ENSCING00000018222	-	100	51.148	ENSFDAG00000007454	TRMT61A	100	51.148	Fukomys_damarensis
ENSCING00000018222	-	99	54.754	ENSFHEG00000010814	trmt61a	99	54.754	Fundulus_heteroclitus
ENSCING00000018222	-	80	57.613	ENSGMOG00000011395	trmt61a	99	57.613	Gadus_morhua
ENSCING00000018222	-	99	53.247	ENSGALG00000011522	TRMT61A	99	53.247	Gallus_gallus
ENSCING00000018222	-	99	53.642	ENSGAFG00000011815	trmt61a	99	54.967	Gambusia_affinis
ENSCING00000018222	-	99	53.642	ENSGACG00000004779	trmt61a	99	53.642	Gasterosteus_aculeatus
ENSCING00000018222	-	99	53.268	ENSGAGG00000015121	TRMT61A	99	53.268	Gopherus_agassizii
ENSCING00000018222	-	100	51.148	ENSGGOG00000007401	TRMT61A	100	51.148	Gorilla_gorilla
ENSCING00000018222	-	99	53.821	ENSHBUG00000022709	trmt61a	99	53.821	Haplochromis_burtoni
ENSCING00000018222	-	100	51.148	ENSHGLG00000005604	TRMT61A	100	51.148	Heterocephalus_glaber_female
ENSCING00000018222	-	100	51.148	ENSHGLG00100008206	TRMT61A	100	51.148	Heterocephalus_glaber_male
ENSCING00000018222	-	98	52.667	ENSHCOG00000000889	trmt61a	97	52.667	Hippocampus_comes
ENSCING00000018222	-	99	55.410	ENSIPUG00000003613	trmt61a	99	55.410	Ictalurus_punctatus
ENSCING00000018222	-	100	50.164	ENSSTOG00000009792	TRMT61A	100	50.164	Ictidomys_tridecemlineatus
ENSCING00000018222	-	100	51.148	ENSJJAG00000000428	Trmt61a	100	51.148	Jaculus_jaculus
ENSCING00000018222	-	99	53.488	ENSKMAG00000018005	trmt61a	99	53.488	Kryptolebias_marmoratus
ENSCING00000018222	-	99	54.817	ENSLBEG00000004835	trmt61a	99	54.817	Labrus_bergylta
ENSCING00000018222	-	99	54.072	ENSLACG00000010801	TRMT61A	99	54.072	Latimeria_chalumnae
ENSCING00000018222	-	99	55.814	ENSLOCG00000009920	trmt61a	99	56.478	Lepisosteus_oculatus
ENSCING00000018222	-	100	51.475	ENSLAFG00000014714	TRMT61A	100	51.475	Loxodonta_africana
ENSCING00000018222	-	100	51.148	ENSMFAG00000032239	TRMT61A	100	51.148	Macaca_fascicularis
ENSCING00000018222	-	100	50.820	ENSMMUG00000007673	TRMT61A	100	50.820	Macaca_mulatta
ENSCING00000018222	-	100	51.148	ENSMNEG00000036125	TRMT61A	100	51.148	Macaca_nemestrina
ENSCING00000018222	-	100	51.148	ENSMLEG00000027585	TRMT61A	100	51.148	Mandrillus_leucophaeus
ENSCING00000018222	-	99	54.723	ENSMAMG00000000062	trmt61a	99	54.723	Mastacembelus_armatus
ENSCING00000018222	-	99	53.488	ENSMZEG00005001914	trmt61a	99	53.488	Maylandia_zebra
ENSCING00000018222	-	99	53.247	ENSMGAG00000013412	TRMT61A	99	53.247	Meleagris_gallopavo
ENSCING00000018222	-	100	52.787	ENSMAUG00000007728	Trmt61a	100	52.787	Mesocricetus_auratus
ENSCING00000018222	-	100	50.492	ENSMICG00000047207	TRMT61A	100	50.492	Microcebus_murinus
ENSCING00000018222	-	100	51.475	ENSMOCG00000014726	Trmt61a	100	51.475	Microtus_ochrogaster
ENSCING00000018222	-	99	54.485	ENSMMOG00000014772	trmt61a	99	54.485	Mola_mola
ENSCING00000018222	-	99	54.817	ENSMODG00000013507	TRMT61A	68	54.817	Monodelphis_domestica
ENSCING00000018222	-	66	52.970	ENSMALG00000021531	trmt61a	73	52.970	Monopterus_albus
ENSCING00000018222	-	100	51.803	MGP_CAROLIEiJ_G0018137	Trmt61a	100	51.803	Mus_caroli
ENSCING00000018222	-	100	51.803	ENSMUSG00000060950	Trmt61a	100	56.140	Mus_musculus
ENSCING00000018222	-	100	52.787	MGP_PahariEiJ_G0029894	Trmt61a	100	52.787	Mus_pahari
ENSCING00000018222	-	100	51.803	MGP_SPRETEiJ_G0018986	Trmt61a	100	51.803	Mus_spretus
ENSCING00000018222	-	100	51.803	ENSMPUG00000002358	TRMT61A	100	51.803	Mustela_putorius_furo
ENSCING00000018222	-	100	51.803	ENSNGAG00000021119	Trmt61a	100	51.803	Nannospalax_galili
ENSCING00000018222	-	99	53.488	ENSNBRG00000023686	trmt61a	99	53.488	Neolamprologus_brichardi
ENSCING00000018222	-	100	35.179	ENSNLEG00000016202	-	100	35.179	Nomascus_leucogenys
ENSCING00000018222	-	97	55.556	ENSMEUG00000005233	TRMT61A	100	55.556	Notamacropus_eugenii
ENSCING00000018222	-	61	50.538	ENSOPRG00000009039	TRMT61A	97	50.538	Ochotona_princeps
ENSCING00000018222	-	100	51.148	ENSODEG00000001775	TRMT61A	100	51.148	Octodon_degus
ENSCING00000018222	-	99	53.488	ENSONIG00000012420	trmt61a	99	53.488	Oreochromis_niloticus
ENSCING00000018222	-	63	52.308	ENSOANG00000000785	-	98	52.308	Ornithorhynchus_anatinus
ENSCING00000018222	-	100	50.492	ENSOCUG00000022502	TRMT61A	100	50.492	Oryctolagus_cuniculus
ENSCING00000018222	-	99	53.156	ENSORLG00000017903	trmt61a	99	53.156	Oryzias_latipes
ENSCING00000018222	-	99	53.488	ENSORLG00020013741	trmt61a	99	53.488	Oryzias_latipes_hni
ENSCING00000018222	-	99	52.824	ENSORLG00015010153	trmt61a	91	52.824	Oryzias_latipes_hsok
ENSCING00000018222	-	99	54.305	ENSOMEG00000003744	-	99	54.305	Oryzias_melastigma
ENSCING00000018222	-	100	50.492	ENSOGAG00000027762	TRMT61A	100	50.492	Otolemur_garnettii
ENSCING00000018222	-	58	55.618	ENSOARG00000005895	TRMT61A	92	55.618	Ovis_aries
ENSCING00000018222	-	100	51.148	ENSPPAG00000027799	TRMT61A	100	51.148	Pan_paniscus
ENSCING00000018222	-	100	50.164	ENSPPRG00000009410	TRMT61A	100	50.164	Panthera_pardus
ENSCING00000018222	-	64	56.345	ENSPTIG00000012664	TRMT61A	68	56.345	Panthera_tigris_altaica
ENSCING00000018222	-	100	51.148	ENSPTRG00000006757	TRMT61A	100	51.148	Pan_troglodytes
ENSCING00000018222	-	100	51.148	ENSPANG00000007028	TRMT61A	100	51.148	Papio_anubis
ENSCING00000018222	-	99	55.482	ENSPKIG00000019170	-	99	55.814	Paramormyrops_kingsleyae
ENSCING00000018222	-	99	53.922	ENSPSIG00000015186	TRMT61A	99	53.922	Pelodiscus_sinensis
ENSCING00000018222	-	99	54.485	ENSPMGG00000011374	trmt61a	99	54.153	Periophthalmus_magnuspinnatus
ENSCING00000018222	-	100	51.475	ENSPEMG00000023413	Trmt61a	100	51.475	Peromyscus_maniculatus_bairdii
ENSCING00000018222	-	99	51.603	ENSPMAG00000009190	TRMT61A	99	51.603	Petromyzon_marinus
ENSCING00000018222	-	65	62.000	ENSPCIG00000011257	-	67	62.000	Phascolarctos_cinereus
ENSCING00000018222	-	99	53.821	ENSPFOG00000007249	trmt61a	99	54.636	Poecilia_formosa
ENSCING00000018222	-	99	53.488	ENSPLAG00000013604	trmt61a	99	54.305	Poecilia_latipinna
ENSCING00000018222	-	99	54.636	ENSPMEG00000006985	trmt61a	99	54.636	Poecilia_mexicana
ENSCING00000018222	-	99	54.153	ENSPREG00000005313	trmt61a	99	54.967	Poecilia_reticulata
ENSCING00000018222	-	98	51.000	ENSPPYG00000006172	-	72	51.000	Pongo_abelii
ENSCING00000018222	-	97	49.832	ENSPCAG00000010827	TRMT61A	100	49.832	Procavia_capensis
ENSCING00000018222	-	100	50.164	ENSPCOG00000028487	TRMT61A	100	50.164	Propithecus_coquereli
ENSCING00000018222	-	99	53.821	ENSPNYG00000016989	trmt61a	99	53.821	Pundamilia_nyererei
ENSCING00000018222	-	99	56.291	ENSPNAG00000029500	trmt61a	99	56.291	Pygocentrus_nattereri
ENSCING00000018222	-	100	52.459	ENSRNOG00000011398	Trmt61a	100	52.459	Rattus_norvegicus
ENSCING00000018222	-	100	51.148	ENSRBIG00000042669	TRMT61A	100	51.148	Rhinopithecus_bieti
ENSCING00000018222	-	100	51.148	ENSRROG00000042448	TRMT61A	100	51.148	Rhinopithecus_roxellana
ENSCING00000018222	-	86	38.062	YJL125C	GCD14	74	38.062	Saccharomyces_cerevisiae
ENSCING00000018222	-	100	49.508	ENSSBOG00000022999	TRMT61A	100	49.508	Saimiri_boliviensis_boliviensis
ENSCING00000018222	-	65	62.500	ENSSHAG00000016357	TRMT61A	99	62.500	Sarcophilus_harrisii
ENSCING00000018222	-	99	56.478	ENSSFOG00015013951	trmt61a	99	56.478	Scleropages_formosus
ENSCING00000018222	-	99	53.156	ENSSMAG00000005682	trmt61a	99	53.156	Scophthalmus_maximus
ENSCING00000018222	-	99	53.311	ENSSDUG00000004840	trmt61a	99	53.311	Seriola_dumerili
ENSCING00000018222	-	99	53.311	ENSSLDG00000014160	trmt61a	99	53.311	Seriola_lalandi_dorsalis
ENSCING00000018222	-	99	52.614	ENSSPUG00000004293	TRMT61A	99	52.614	Sphenodon_punctatus
ENSCING00000018222	-	99	53.642	ENSSPAG00000017259	trmt61a	99	53.642	Stegastes_partitus
ENSCING00000018222	-	99	50.498	ENSSSCG00000034738	TRMT61A	99	50.498	Sus_scrofa
ENSCING00000018222	-	99	54.485	ENSTGUG00000012865	-	99	54.485	Taeniopygia_guttata
ENSCING00000018222	-	99	54.153	ENSTRUG00000007942	trmt61a	99	54.153	Takifugu_rubripes
ENSCING00000018222	-	99	55.116	ENSTNIG00000012391	trmt61a	99	55.116	Tetraodon_nigroviridis
ENSCING00000018222	-	99	49.505	ENSTTRG00000006456	TRMT61A	92	49.505	Tursiops_truncatus
ENSCING00000018222	-	100	50.820	ENSUAMG00000012092	TRMT61A	81	50.820	Ursus_americanus
ENSCING00000018222	-	80	55.918	ENSUMAG00000024893	TRMT61A	69	55.918	Ursus_maritimus
ENSCING00000018222	-	100	50.820	ENSVVUG00000000754	TRMT61A	100	50.820	Vulpes_vulpes
ENSCING00000018222	-	99	55.150	ENSXETG00000026907	trmt61a	99	55.150	Xenopus_tropicalis
ENSCING00000018222	-	71	49.302	ENSXCOG00000004760	trmt61a	91	50.691	Xiphophorus_couchianus
ENSCING00000018222	-	99	53.311	ENSXMAG00000018447	trmt61a	99	53.642	Xiphophorus_maculatus