EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018240 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specificity factor subunit 5-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 720 bases
Position: chr1:8643007-8643726
Accession: 104266883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000033967	NUDIX_2	PF13869.6	6.3e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034903	-	720	-	ENSCINP00000033967	239 (aa)	XP_009862495	H2XWD3

Gene Model

Click here to download ENSCING00000018240's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018240	-	82	87.692	ENSG00000167005	NUDT21	100	88.591	Homo_sapiens
ENSCING00000018240	-	97	77.155	ENSAPOG00000022515	nudt21	85	87.692	Acanthochromis_polyacanthus
ENSCING00000018240	-	97	77.155	ENSAMEG00000016628	NUDT21	96	77.155	Ailuropoda_melanoleuca
ENSCING00000018240	-	97	77.586	ENSACIG00000002809	nudt21	96	77.155	Amphilophus_citrinellus
ENSCING00000018240	-	97	77.155	ENSAOCG00000004820	nudt21	85	87.692	Amphiprion_ocellaris
ENSCING00000018240	-	97	77.155	ENSAPEG00000013434	nudt21	85	87.692	Amphiprion_percula
ENSCING00000018240	-	97	77.155	ENSATEG00000002304	nudt21	85	87.692	Anabas_testudineus
ENSCING00000018240	-	78	87.097	ENSAPLG00000012153	NUDT21	97	87.097	Anas_platyrhynchos
ENSCING00000018240	-	97	76.724	ENSACAG00000007323	NUDT21	96	76.724	Anolis_carolinensis
ENSCING00000018240	-	72	77.907	ENSANAG00000031404	-	82	77.976	Aotus_nancymaae
ENSCING00000018240	-	82	87.692	ENSANAG00000034588	-	86	87.692	Aotus_nancymaae
ENSCING00000018240	-	82	85.641	ENSANAG00000020715	-	91	85.641	Aotus_nancymaae
ENSCING00000018240	-	97	77.586	ENSACLG00000004389	nudt21	96	77.155	Astatotilapia_calliptera
ENSCING00000018240	-	97	76.724	ENSAMXG00000043933	nudt21	96	76.724	Astyanax_mexicanus
ENSCING00000018240	-	82	87.692	ENSBTAG00000010207	NUDT21	86	87.692	Bos_taurus
ENSCING00000018240	-	81	69.072	WBGene00009668	cfim-1	85	69.072	Caenorhabditis_elegans
ENSCING00000018240	-	82	87.692	ENSCJAG00000041932	NUDT21	86	87.692	Callithrix_jacchus
ENSCING00000018240	-	72	45.614	ENSCAFG00000030119	-	79	45.614	Canis_familiaris
ENSCING00000018240	-	97	77.586	ENSCAFG00000023283	-	96	77.586	Canis_familiaris
ENSCING00000018240	-	100	74.059	ENSCAFG00000002667	-	97	74.059	Canis_familiaris
ENSCING00000018240	-	82	64.615	ENSCAFG00000006152	-	94	64.615	Canis_familiaris
ENSCING00000018240	-	97	75.424	ENSCAFG00020004953	-	81	85.938	Canis_lupus_dingo
ENSCING00000018240	-	83	85.859	ENSCAFG00020010371	-	85	85.859	Canis_lupus_dingo
ENSCING00000018240	-	82	87.692	ENSCHIG00000026616	NUDT21	86	87.692	Capra_hircus
ENSCING00000018240	-	97	77.586	ENSTSYG00000014602	NUDT21	96	77.586	Carlito_syrichta
ENSCING00000018240	-	97	75.862	ENSCPOG00000003705	NUDT21	96	88.830	Cavia_porcellus
ENSCING00000018240	-	80	68.586	ENSCCAG00000027748	-	83	68.586	Cebus_capucinus
ENSCING00000018240	-	82	87.692	ENSCCAG00000035510	NUDT21	86	87.692	Cebus_capucinus
ENSCING00000018240	-	82	87.692	ENSCATG00000042445	NUDT21	86	87.692	Cercocebus_atys
ENSCING00000018240	-	97	77.586	ENSCLAG00000005751	NUDT21	90	86.979	Chinchilla_lanigera
ENSCING00000018240	-	82	87.692	ENSCSAG00000005136	NUDT21	86	87.692	Chlorocebus_sabaeus
ENSCING00000018240	-	97	77.586	ENSCPBG00000011976	NUDT21	96	77.586	Chrysemys_picta_bellii
ENSCING00000018240	-	100	94.215	ENSCSAVG00000004322	-	100	94.215	Ciona_savignyi
ENSCING00000018240	-	82	87.692	ENSCANG00000036650	NUDT21	86	87.692	Colobus_angolensis_palliatus
ENSCING00000018240	-	97	77.586	ENSCGRG00001016313	Nudt21	86	88.421	Cricetulus_griseus_chok1gshd
ENSCING00000018240	-	64	72.549	ENSCGRG00001007481	-	76	72.549	Cricetulus_griseus_chok1gshd
ENSCING00000018240	-	64	72.549	ENSCGRG00000009012	-	76	72.549	Cricetulus_griseus_crigri
ENSCING00000018240	-	97	77.586	ENSCGRG00000016451	Nudt21	86	88.830	Cricetulus_griseus_crigri
ENSCING00000018240	-	97	77.155	ENSCSEG00000001524	nudt21	85	87.692	Cynoglossus_semilaevis
ENSCING00000018240	-	97	77.155	ENSCVAG00000009683	nudt21	97	76.496	Cyprinodon_variegatus
ENSCING00000018240	-	97	77.586	ENSDARG00000003153	nudt21	96	77.586	Danio_rerio
ENSCING00000018240	-	80	82.723	ENSDNOG00000034510	-	84	82.723	Dasypus_novemcinctus
ENSCING00000018240	-	82	61.026	ENSDORG00000030074	-	87	61.026	Dipodomys_ordii
ENSCING00000018240	-	97	77.586	ENSDORG00000005129	-	96	77.586	Dipodomys_ordii
ENSCING00000018240	-	97	75.758	FBgn0035987	CG3689	96	75.758	Drosophila_melanogaster
ENSCING00000018240	-	94	77.333	ENSETEG00000013634	NUDT21	96	77.333	Echinops_telfairi
ENSCING00000018240	-	96	76.087	ENSEBUG00000002498	nudt21	99	85.263	Eptatretus_burgeri
ENSCING00000018240	-	97	77.586	ENSEASG00005004882	NUDT21	96	77.586	Equus_asinus_asinus
ENSCING00000018240	-	97	77.586	ENSECAG00000001043	NUDT21	86	88.830	Equus_caballus
ENSCING00000018240	-	97	77.586	ENSEEUG00000003402	NUDT21	96	77.586	Erinaceus_europaeus
ENSCING00000018240	-	97	78.112	ENSELUG00000011938	-	92	78.112	Esox_lucius
ENSCING00000018240	-	97	75.862	ENSELUG00000016262	-	86	86.667	Esox_lucius
ENSCING00000018240	-	97	77.586	ENSFCAG00000008669	NUDT21	96	77.586	Felis_catus
ENSCING00000018240	-	97	77.586	ENSFALG00000007561	NUDT21	96	77.586	Ficedula_albicollis
ENSCING00000018240	-	97	77.586	ENSFDAG00000011750	NUDT21	96	77.586	Fukomys_damarensis
ENSCING00000018240	-	76	89.011	ENSFHEG00000011485	nudt21	88	89.011	Fundulus_heteroclitus
ENSCING00000018240	-	95	76.106	ENSGMOG00000002872	nudt21	85	87.302	Gadus_morhua
ENSCING00000018240	-	97	77.155	ENSGAFG00000017473	nudt21	85	87.692	Gambusia_affinis
ENSCING00000018240	-	97	74.892	ENSGACG00000015869	nudt21	83	85.567	Gasterosteus_aculeatus
ENSCING00000018240	-	97	77.586	ENSGAGG00000017367	NUDT21	96	77.586	Gopherus_agassizii
ENSCING00000018240	-	82	87.692	ENSGGOG00000002375	NUDT21	86	87.692	Gorilla_gorilla
ENSCING00000018240	-	95	77.434	ENSHBUG00000015015	nudt21	96	76.991	Haplochromis_burtoni
ENSCING00000018240	-	97	77.586	ENSHGLG00000015947	NUDT21	87	88.830	Heterocephalus_glaber_female
ENSCING00000018240	-	97	71.552	ENSHGLG00100000342	-	96	71.552	Heterocephalus_glaber_male
ENSCING00000018240	-	97	77.586	ENSHGLG00100011788	NUDT21	87	88.830	Heterocephalus_glaber_male
ENSCING00000018240	-	97	73.707	ENSHGLG00100009154	-	96	73.707	Heterocephalus_glaber_male
ENSCING00000018240	-	99	75.630	ENSHCOG00000004360	nudt21	85	87.692	Hippocampus_comes
ENSCING00000018240	-	97	76.724	ENSIPUG00000004208	nudt21	96	76.724	Ictalurus_punctatus
ENSCING00000018240	-	82	87.692	ENSSTOG00000005838	NUDT21	87	88.525	Ictidomys_tridecemlineatus
ENSCING00000018240	-	97	77.586	ENSJJAG00000017101	Nudt21	96	77.586	Jaculus_jaculus
ENSCING00000018240	-	97	77.155	ENSKMAG00000008705	nudt21	97	77.155	Kryptolebias_marmoratus
ENSCING00000018240	-	97	77.155	ENSLBEG00000024494	nudt21	85	87.692	Labrus_bergylta
ENSCING00000018240	-	82	87.692	ENSLACG00000015324	NUDT21	86	87.692	Latimeria_chalumnae
ENSCING00000018240	-	82	87.179	ENSLOCG00000008005	nudt21	86	87.179	Lepisosteus_oculatus
ENSCING00000018240	-	82	64.103	ENSLAFG00000029402	-	98	64.103	Loxodonta_africana
ENSCING00000018240	-	97	77.586	ENSLAFG00000028465	-	96	77.586	Loxodonta_africana
ENSCING00000018240	-	82	87.692	ENSMFAG00000038276	NUDT21	86	87.692	Macaca_fascicularis
ENSCING00000018240	-	82	87.692	ENSMMUG00000038955	NUDT21	86	87.692	Macaca_mulatta
ENSCING00000018240	-	82	87.692	ENSMNEG00000038680	NUDT21	86	87.692	Macaca_nemestrina
ENSCING00000018240	-	82	87.692	ENSMLEG00000041489	NUDT21	86	87.692	Mandrillus_leucophaeus
ENSCING00000018240	-	97	77.155	ENSMAMG00000020931	nudt21	85	87.692	Mastacembelus_armatus
ENSCING00000018240	-	97	77.586	ENSMZEG00005013153	nudt21	96	77.155	Maylandia_zebra
ENSCING00000018240	-	79	88.830	ENSMGAG00000000975	NUDT21	100	88.830	Meleagris_gallopavo
ENSCING00000018240	-	97	77.586	ENSMAUG00000000829	Nudt21	91	87.500	Mesocricetus_auratus
ENSCING00000018240	-	97	77.586	ENSMICG00000046719	NUDT21	96	77.586	Microcebus_murinus
ENSCING00000018240	-	97	77.586	ENSMOCG00000018234	Nudt21	90	88.421	Microtus_ochrogaster
ENSCING00000018240	-	97	71.552	ENSMMOG00000016237	nudt21	84	81.026	Mola_mola
ENSCING00000018240	-	97	77.586	ENSMODG00000013371	NUDT21	96	77.586	Monodelphis_domestica
ENSCING00000018240	-	96	72.052	ENSMALG00000000627	nudt21	83	81.771	Monopterus_albus
ENSCING00000018240	-	97	77.586	MGP_CAROLIEiJ_G0031388	Nudt21	96	77.586	Mus_caroli
ENSCING00000018240	-	97	77.586	ENSMUSG00000031754	Nudt21	86	88.830	Mus_musculus
ENSCING00000018240	-	97	77.586	MGP_PahariEiJ_G0022987	Nudt21	96	77.586	Mus_pahari
ENSCING00000018240	-	97	77.586	MGP_SPRETEiJ_G0032507	Nudt21	96	77.586	Mus_spretus
ENSCING00000018240	-	97	77.586	ENSMPUG00000019793	-	96	77.586	Mustela_putorius_furo
ENSCING00000018240	-	97	77.586	ENSMPUG00000003451	-	96	77.586	Mustela_putorius_furo
ENSCING00000018240	-	97	77.586	ENSMLUG00000004968	NUDT21	96	77.586	Myotis_lucifugus
ENSCING00000018240	-	97	77.586	ENSNGAG00000023358	Nudt21	96	77.586	Nannospalax_galili
ENSCING00000018240	-	95	77.434	ENSNBRG00000009313	nudt21	96	76.991	Neolamprologus_brichardi
ENSCING00000018240	-	82	87.692	ENSNLEG00000001963	NUDT21	86	87.692	Nomascus_leucogenys
ENSCING00000018240	-	83	78.000	ENSNLEG00000009890	-	99	78.000	Nomascus_leucogenys
ENSCING00000018240	-	97	77.155	ENSMEUG00000015461	NUDT21	96	77.155	Notamacropus_eugenii
ENSCING00000018240	-	97	75.431	ENSOPRG00000006689	NUDT21	96	75.431	Ochotona_princeps
ENSCING00000018240	-	97	68.966	ENSODEG00000002256	-	96	68.966	Octodon_degus
ENSCING00000018240	-	97	77.586	ENSODEG00000017012	-	96	77.586	Octodon_degus
ENSCING00000018240	-	97	77.586	ENSONIG00000005734	nudt21	96	77.155	Oreochromis_niloticus
ENSCING00000018240	-	82	87.692	ENSOANG00000012782	NUDT21	86	87.692	Ornithorhynchus_anatinus
ENSCING00000018240	-	97	76.293	ENSOCUG00000027084	-	96	76.293	Oryctolagus_cuniculus
ENSCING00000018240	-	97	77.586	ENSOCUG00000017224	-	96	77.586	Oryctolagus_cuniculus
ENSCING00000018240	-	82	83.590	ENSOCUG00000021881	-	86	83.590	Oryctolagus_cuniculus
ENSCING00000018240	-	97	76.724	ENSORLG00000008789	nudt21	85	87.302	Oryzias_latipes
ENSCING00000018240	-	97	76.724	ENSORLG00020007635	nudt21	85	87.302	Oryzias_latipes_hni
ENSCING00000018240	-	97	76.724	ENSORLG00015005300	nudt21	85	87.302	Oryzias_latipes_hsok
ENSCING00000018240	-	97	76.724	ENSOMEG00000002368	nudt21	97	76.496	Oryzias_melastigma
ENSCING00000018240	-	97	77.586	ENSOGAG00000014888	NUDT21	96	77.586	Otolemur_garnettii
ENSCING00000018240	-	83	78.283	ENSOGAG00000033902	-	92	78.283	Otolemur_garnettii
ENSCING00000018240	-	82	87.692	ENSOARG00000018460	NUDT21	86	87.692	Ovis_aries
ENSCING00000018240	-	82	87.692	ENSPPAG00000043853	NUDT21	86	87.692	Pan_paniscus
ENSCING00000018240	-	97	77.586	ENSPPRG00000023740	NUDT21	96	77.586	Panthera_pardus
ENSCING00000018240	-	97	77.586	ENSPTIG00000021352	NUDT21	96	77.586	Panthera_tigris_altaica
ENSCING00000018240	-	82	87.692	ENSPTRG00000008131	NUDT21	86	87.692	Pan_troglodytes
ENSCING00000018240	-	82	87.692	ENSPANG00000019149	NUDT21	86	87.692	Papio_anubis
ENSCING00000018240	-	97	76.724	ENSPKIG00000022541	-	96	76.724	Paramormyrops_kingsleyae
ENSCING00000018240	-	97	77.155	ENSPKIG00000001620	nudt21	96	77.155	Paramormyrops_kingsleyae
ENSCING00000018240	-	67	88.820	ENSPSIG00000008178	NUDT21	100	88.820	Pelodiscus_sinensis
ENSCING00000018240	-	81	75.773	ENSPMGG00000002636	nudt21	78	75.773	Periophthalmus_magnuspinnatus
ENSCING00000018240	-	97	77.586	ENSPEMG00000015463	Nudt21	86	88.830	Peromyscus_maniculatus_bairdii
ENSCING00000018240	-	97	76.724	ENSPMAG00000000684	nudt21	97	75.431	Petromyzon_marinus
ENSCING00000018240	-	97	77.586	ENSPCIG00000027199	NUDT21	96	77.586	Phascolarctos_cinereus
ENSCING00000018240	-	97	77.586	ENSPFOG00000001419	nudt21	85	87.692	Poecilia_formosa
ENSCING00000018240	-	97	77.586	ENSPLAG00000016420	nudt21	85	87.692	Poecilia_latipinna
ENSCING00000018240	-	97	77.586	ENSPMEG00000022481	nudt21	85	87.692	Poecilia_mexicana
ENSCING00000018240	-	97	77.586	ENSPREG00000001285	nudt21	85	87.692	Poecilia_reticulata
ENSCING00000018240	-	82	87.692	ENSPPYG00000007365	NUDT21	86	87.692	Pongo_abelii
ENSCING00000018240	-	97	66.810	ENSPCAG00000003875	NUDT21	96	66.810	Procavia_capensis
ENSCING00000018240	-	97	77.586	ENSPCOG00000016104	-	96	77.586	Propithecus_coquereli
ENSCING00000018240	-	97	64.224	ENSPCOG00000020893	-	79	80.159	Propithecus_coquereli
ENSCING00000018240	-	82	74.359	ENSPCOG00000027587	-	92	73.604	Propithecus_coquereli
ENSCING00000018240	-	79	88.830	ENSPVAG00000014583	NUDT21	100	88.830	Pteropus_vampyrus
ENSCING00000018240	-	79	88.830	ENSPNYG00000014773	nudt21	94	88.830	Pundamilia_nyererei
ENSCING00000018240	-	97	76.724	ENSPNAG00000017032	nudt21	96	76.724	Pygocentrus_nattereri
ENSCING00000018240	-	97	77.586	ENSRNOG00000042983	Nudt21	96	77.586	Rattus_norvegicus
ENSCING00000018240	-	82	87.692	ENSRBIG00000033736	-	86	87.692	Rhinopithecus_bieti
ENSCING00000018240	-	97	77.586	ENSRBIG00000030142	-	96	77.586	Rhinopithecus_bieti
ENSCING00000018240	-	82	87.692	ENSRROG00000034864	NUDT21	86	87.692	Rhinopithecus_roxellana
ENSCING00000018240	-	82	87.692	ENSSBOG00000033712	NUDT21	86	87.692	Saimiri_boliviensis_boliviensis
ENSCING00000018240	-	97	77.586	ENSSHAG00000009651	NUDT21	96	77.586	Sarcophilus_harrisii
ENSCING00000018240	-	97	76.724	ENSSFOG00015013984	nudt21	97	76.724	Scleropages_formosus
ENSCING00000018240	-	97	77.586	ENSSFOG00015011349	nudt21	77	77.586	Scleropages_formosus
ENSCING00000018240	-	82	87.692	ENSSMAG00000000646	nudt21	86	87.692	Scophthalmus_maximus
ENSCING00000018240	-	97	77.155	ENSSDUG00000019001	nudt21	85	87.692	Seriola_dumerili
ENSCING00000018240	-	97	77.155	ENSSLDG00000018315	nudt21	85	87.692	Seriola_lalandi_dorsalis
ENSCING00000018240	-	82	87.692	ENSSARG00000006493	NUDT21	86	87.692	Sorex_araneus
ENSCING00000018240	-	97	77.586	ENSSPUG00000004128	NUDT21	86	88.482	Sphenodon_punctatus
ENSCING00000018240	-	97	77.155	ENSSPAG00000010060	nudt21	85	87.692	Stegastes_partitus
ENSCING00000018240	-	80	54.450	ENSSSCG00000032485	-	80	54.450	Sus_scrofa
ENSCING00000018240	-	85	71.163	ENSSSCG00000004786	-	96	71.163	Sus_scrofa
ENSCING00000018240	-	97	77.586	ENSSSCG00000034521	NUDT21	96	77.586	Sus_scrofa
ENSCING00000018240	-	83	63.184	ENSSSCG00000007921	-	68	75.362	Sus_scrofa
ENSCING00000018240	-	97	77.586	ENSTGUG00000006599	NUDT21	96	77.586	Taeniopygia_guttata
ENSCING00000018240	-	82	87.692	ENSTRUG00000017953	nudt21	85	87.692	Takifugu_rubripes
ENSCING00000018240	-	97	77.155	ENSTNIG00000009312	nudt21	85	87.692	Tetraodon_nigroviridis
ENSCING00000018240	-	55	68.182	ENSTBEG00000007664	NUDT21	52	68.182	Tupaia_belangeri
ENSCING00000018240	-	97	77.586	ENSTTRG00000013545	NUDT21	96	77.586	Tursiops_truncatus
ENSCING00000018240	-	95	77.093	ENSUAMG00000016945	NUDT21	93	77.093	Ursus_americanus
ENSCING00000018240	-	97	77.586	ENSUMAG00000001344	NUDT21	96	77.586	Ursus_maritimus
ENSCING00000018240	-	97	77.586	ENSVPAG00000003701	NUDT21	96	77.586	Vicugna_pacos
ENSCING00000018240	-	80	79.581	ENSVVUG00000013998	-	85	79.581	Vulpes_vulpes
ENSCING00000018240	-	70	69.591	ENSVVUG00000021791	-	86	68.786	Vulpes_vulpes
ENSCING00000018240	-	97	77.586	ENSXETG00000020017	nudt21	96	77.586	Xenopus_tropicalis
ENSCING00000018240	-	97	77.155	ENSXMAG00000014172	nudt21	85	87.692	Xiphophorus_maculatus